| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117188
Identifier: 197117188
GI number: 197117188
Start: 935795
End: 936235
Strand: Direct
Name: 197117188
Synonym: Gbem_0796
Alternate gene names: NA
Gene position: 935795-936235 (Clockwise)
Preceding gene: 197117187
Following gene: 197117189
Centisome position: 20.28
GC content: 58.96
Gene sequence:
>441_bases ATGGATACTTACACGATCGATGTGGAACTTGAACACTACTACGGCGACCGCATGGCAACCAGCAGCAGGGAAGCCATCCG CCGCTTTTACCTGCGTGCCGTCTCCCGCTGCAACGGGGCGGAACTTGAGAGATACCTGCGCCTGGTGAGGGCGCACGCGT CGGTGTATTCGTCGGTGCACCGCATGTTCAGCTCGCCGTTCAAGCATATGGAGCTCCCACTGTTCCTTTCCAGCCTGGTG CTGTTTGCCTCCAGCGTCCTCATGGTTTTTTACGGGGAAACCACTGTGATAGTCGCCGCCGGAACCTCGGCGGGGCTGGT GGGTATGCTGCAGTGCGGCCGTTCGTTGATCAAATACTGGCAGCGCCACGCCGTGCGCGAGGCGGTGTTCCTTGAGTTCG CCGAGATTCTGCAGAAAGAAAGCGGCGAGTTCACCAGATAA
Upstream 100 bases:
>100_bases GGGGGAGTGCGGACATCGTCCGGTTGGTACGTATCCTGCTTTTTCACTTTTGCATTACCATAACCGCGCGGAATTCCCGG GCACCAATTCGAGGGTTGAG
Downstream 100 bases:
>100_bases TTAAAAGGGGACAGGCAAAAGGGGACAGGCAACTTTTTGATTTCAAAAAGTAGCCTGTCCCCCTTGGACATGTCCCCCTT CTACAGTCATAAAAACCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MDTYTIDVELEHYYGDRMATSSREAIRRFYLRAVSRCNGAELERYLRLVRAHASVYSSVHRMFSSPFKHMELPLFLSSLV LFASSVLMVFYGETTVIVAAGTSAGLVGMLQCGRSLIKYWQRHAVREAVFLEFAEILQKESGEFTR
Sequences:
>Translated_146_residues MDTYTIDVELEHYYGDRMATSSREAIRRFYLRAVSRCNGAELERYLRLVRAHASVYSSVHRMFSSPFKHMELPLFLSSLV LFASSVLMVFYGETTVIVAAGTSAGLVGMLQCGRSLIKYWQRHAVREAVFLEFAEILQKESGEFTR >Mature_146_residues MDTYTIDVELEHYYGDRMATSSREAIRRFYLRAVSRCNGAELERYLRLVRAHASVYSSVHRMFSSPFKHMELPLFLSSLV LFASSVLMVFYGETTVIVAAGTSAGLVGMLQCGRSLIKYWQRHAVREAVFLEFAEILQKESGEFTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16732; Mature: 16732
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTYTIDVELEHYYGDRMATSSREAIRRFYLRAVSRCNGAELERYLRLVRAHASVYSSVH CCCEEEEEEEHHHHCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH RMFSSPFKHMELPLFLSSLVLFASSVLMVFYGETTVIVAAGTSAGLVGMLQCGRSLIKYW HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH QRHAVREAVFLEFAEILQKESGEFTR HHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDTYTIDVELEHYYGDRMATSSREAIRRFYLRAVSRCNGAELERYLRLVRAHASVYSSVH CCCEEEEEEEHHHHCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH RMFSSPFKHMELPLFLSSLVLFASSVLMVFYGETTVIVAAGTSAGLVGMLQCGRSLIKYW HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH QRHAVREAVFLEFAEILQKESGEFTR HHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA