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The map label for this gene is yodM [H]

Identifier: 197117168

GI number: 197117168

Start: 909502

End: 910260

Strand: Reverse

Name: yodM [H]

Synonym: Gbem_0773

Alternate gene names: 197117168

Gene position: 910260-909502 (Counterclockwise)

Preceding gene: 197117169

Following gene: 197117167

Centisome position: 19.72

GC content: 58.63

Gene sequence:

>759_bases
ATGCTGAAATATAAGGAGAACAAACGAATACCAATGGTTCGTCGTTTCCTTCTCCAACTGCGCCCTCTTCTTGAACCACG
ACGGCGCCCTGAGCTTTGGTCCCTGATCGCGGTATTCGTGGTGGTAAGCGGGTTGTGGGCTTTCGCGGAGCTTGCGGATG
AGATCCGGGGAGAGCCGGGTTCCTTTGACCGGGCCATTTTATTGGCCATGCGTACCCCAGATGCTCCCCACGACCCCATC
GGCCCAAGGTGGGTGGAGGAGACAGCCCGCGACTTCACGGCCTTTGGCGGAGACGGAGTGTTGACCTTCATCTTGCTGGC
CACCGCAGGTTTCCTGTTTTTGAAGGGAAATTACCGGACCATCCTGCTTCTATTTGCCGCGACTATCGGCGGCGGAACCT
TGAGCACTTTCCTGAAGCTCCACTACGACCGTCCGCGGCCGGATCTTGTATCCCCCCTCGCCTATACCACCTCTCAAAGC
TTTCCCAGCGGCCATGCCCTTCTTGCCGCAGCGACCTACCTGACCCTTGGCGCCCTGCTCGCACGGGTGCAACCCAACCA
CGCGGTTAGAGCCTACCTGATGTTCCTGGCTATACTGCTAACTTTCATTGTAGGGGCGAGCCGGGTCTACCTGGGAGTCC
ACTGGCCCACCGACGTCCTTGCCGGTTGGACAATAGGGTCAGTGTGGGCGCTGATCTGTCTGCTTATCGCCTACTGGCTG
CAGCGCCTGGGCCGCATGGATTTGGAGGAACACAGGTAA

Upstream 100 bases:

>100_bases
CCATCCCGCCTTCGCCCCCACCCGTTCAGCCGATGCCGCTCCTTTGCACAGAGGAAAGAACATTTGATGAAGAGGCAGAC
GGCCAGTTCCGCCTGTGCTG

Downstream 100 bases:

>100_bases
AAGCAGGTGCCTCCAGCCCCCATGTATAGAGTTCCTTTCTGTTTCCCTCTCCCCCTATCAAGACAACGTTCAGCGCAATG
ATGGCCGGTATTAAGGCAGT

Product: phosphatase, PAP2-like family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MLKYKENKRIPMVRRFLLQLRPLLEPRRRPELWSLIAVFVVVSGLWAFAELADEIRGEPGSFDRAILLAMRTPDAPHDPI
GPRWVEETARDFTAFGGDGVLTFILLATAGFLFLKGNYRTILLLFAATIGGGTLSTFLKLHYDRPRPDLVSPLAYTTSQS
FPSGHALLAAATYLTLGALLARVQPNHAVRAYLMFLAILLTFIVGASRVYLGVHWPTDVLAGWTIGSVWALICLLIAYWL
QRLGRMDLEEHR

Sequences:

>Translated_252_residues
MLKYKENKRIPMVRRFLLQLRPLLEPRRRPELWSLIAVFVVVSGLWAFAELADEIRGEPGSFDRAILLAMRTPDAPHDPI
GPRWVEETARDFTAFGGDGVLTFILLATAGFLFLKGNYRTILLLFAATIGGGTLSTFLKLHYDRPRPDLVSPLAYTTSQS
FPSGHALLAAATYLTLGALLARVQPNHAVRAYLMFLAILLTFIVGASRVYLGVHWPTDVLAGWTIGSVWALICLLIAYWL
QRLGRMDLEEHR
>Mature_252_residues
MLKYKENKRIPMVRRFLLQLRPLLEPRRRPELWSLIAVFVVVSGLWAFAELADEIRGEPGSFDRAILLAMRTPDAPHDPI
GPRWVEETARDFTAFGGDGVLTFILLATAGFLFLKGNYRTILLLFAATIGGGTLSTFLKLHYDRPRPDLVSPLAYTTSQS
FPSGHALLAAATYLTLGALLARVQPNHAVRAYLMFLAILLTFIVGASRVYLGVHWPTDVLAGWTIGSVWALICLLIAYWL
QRLGRMDLEEHR

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PA-phosphatase related phosphoesterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016118
- InterPro:   IPR000326 [H]

Pfam domain/function: PF01569 PAP2 [H]

EC number: NA

Molecular weight: Translated: 28260; Mature: 28260

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKYKENKRIPMVRRFLLQLRPLLEPRRRPELWSLIAVFVVVSGLWAFAELADEIRGEPG
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SFDRAILLAMRTPDAPHDPIGPRWVEETARDFTAFGGDGVLTFILLATAGFLFLKGNYRT
CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCHHH
ILLLFAATIGGGTLSTFLKLHYDRPRPDLVSPLAYTTSQSFPSGHALLAAATYLTLGALL
HHHHHHHHHCCHHHHHHHHHHCCCCCCHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
ARVQPNHAVRAYLMFLAILLTFIVGASRVYLGVHWPTDVLAGWTIGSVWALICLLIAYWL
HHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHH
QRLGRMDLEEHR
HHHCCCCHHCCC
>Mature Secondary Structure
MLKYKENKRIPMVRRFLLQLRPLLEPRRRPELWSLIAVFVVVSGLWAFAELADEIRGEPG
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SFDRAILLAMRTPDAPHDPIGPRWVEETARDFTAFGGDGVLTFILLATAGFLFLKGNYRT
CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCHHH
ILLLFAATIGGGTLSTFLKLHYDRPRPDLVSPLAYTTSQSFPSGHALLAAATYLTLGALL
HHHHHHHHHCCHHHHHHHHHHCCCCCCHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
ARVQPNHAVRAYLMFLAILLTFIVGASRVYLGVHWPTDVLAGWTIGSVWALICLLIAYWL
HHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHH
QRLGRMDLEEHR
HHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]