Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
---|---|
Accession | NC_011146 |
Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is cheY-9 [C]
Identifier: 197117140
GI number: 197117140
Start: 878391
End: 879518
Strand: Direct
Name: cheY-9 [C]
Synonym: Gbem_0745
Alternate gene names: 197117140
Gene position: 878391-879518 (Clockwise)
Preceding gene: 197117139
Following gene: 197117141
Centisome position: 19.03
GC content: 63.39
Gene sequence:
>1128_bases ATGCTGATTGTCTGCCCCAATTGCAAGAAAAGGTTCAACGTGGATCCGGGAACGCCGGATCAGCCCAAGAAGCTTCGCTG CTCCAACTGCCGGGCCGTTTTCCGCCTGGTCAGGAAGGGGGAGCGCAGCGAGGGGGCAAAGTCCAAGCTCAAGGTGGTGA TCGCCAACGAGAGTGCGTCCTTCTGCCAGGCCGTGGAGAAGGTGCTTTCCCACGAGCCGTTCCAGCTCTTTCTCTGCACC GACGGGAAAGAGGCCCTGGAAACGGTGCAGCAGGTGACGCCGGACGTGCTGCTTCTCGACGTCGCCCTTCCCACCATGTT CGGTTTCGAGGTTTGCGAAAGGGTGCGTCAGGACCCGGCGCTGGCCAACGTGAAGATCGTGCTGATCGCCTCCATTTACG ACAAGACCCGCTACAAAAGGTCCCCCAATTCGCTTTACGGCGCCGACGACTACATCGAGAAGCACCACATTCCCGATTCG CTGGTCCCGATGATCTACCGCCTTGCCTCCGGAAGCGAGCCGCAGGCCCAAAGCCCGACCGAAAGCGAGCTGGCAGAGCA GGAGGAGACCCGCAGCGAGATCCGCCAGTGCGAGGTGGAGGAAACCTCCACGGTAGAGGTGGCAGCGCCGGCAGCGGAGC CCGCGGCAGAGCCCGTGGCAGAGCCCGTGGCAGAGCCCGTGGCAGAGCCCGTGGCAGAGCCCGTGGCGCCGGTGCAGTCG GACCAGTCGGACCAGTCGGACCAGTCGGACCAGTCGGACCAGTCGGACCAGTCGGACCAGTCGGACCAGTCGGACCAGTC GGACAGATCCGAGTCGGACAGCGCCCCTGCACCCGCCGCTGCCCCTGCACCCACGCCTGCACCTGCTTCCGAGGAGGTTC CGCCTGAGCATGTGAAGGCACGGCGCCTGGCCAGGATCATCGTTTCGGACATCGTCCTTTACAACCAGGCAAAGTTCGAG CAAGGGGTGCGCGAGGGGACGTTCCACCAGCTATTGGCCGACGACATCCGCGAAGGGGAGAACCTCTACCGGCAAAGGGT GTCCCAGCAGGTGCGCGACACCACCTCCTTCCTGAAGGAAGCCTTCGAGGAAGTGATCGCAAAAAAACGCGCCGAACTGA ACCTCTAG
Upstream 100 bases:
>100_bases TGCTCAATATAGACGCTCTGCTTACCTTCCAGGAAAAAGCTGAGCTCGGCATCTTCTCCCCCCAGACGGGGGGCACTTCC ACGAACAAAAAGAGCTCCGC
Downstream 100 bases:
>100_bases GAGTCACCTCTGGCAACTGTCCTAAAAGACATCACGATAAAACTCAGCAGCCGCGACGAGGAGGAACGGCGCCTTGCCGT GCTGGCCCTGAGGGACCACC
Product: chemotaxis protein CheY
Products: NA
Alternate protein names: Response Regulator; Response Regulator Receiver Domain Protein; Response Regulator Receiver; Response Regulator PleD; Two-Component Hybrid Sensor And Regulator; Two-Component System Regulatory Protein; Response Regulator Receiver Domain-Containing Protein; Response Regulator/GGDEF Domain Protein; Hybrid Two-Component Sensor And Regulatory Protein; PAS Sensor Protein; Two-Component Response Regulator; Response Regulator Receiver Modulated Diguanylate Cyclase; Hybrid Sensory Kinase; CheY Family Protein; Two-Component System Response Regulator; Chemotaxis Protein CheY; Response Regulator With Diguanylate Cyclase Domain; Multi-Sensor Signal Transduction Histidine Kinase
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MLIVCPNCKKRFNVDPGTPDQPKKLRCSNCRAVFRLVRKGERSEGAKSKLKVVIANESASFCQAVEKVLSHEPFQLFLCT DGKEALETVQQVTPDVLLLDVALPTMFGFEVCERVRQDPALANVKIVLIASIYDKTRYKRSPNSLYGADDYIEKHHIPDS LVPMIYRLASGSEPQAQSPTESELAEQEETRSEIRQCEVEETSTVEVAAPAAEPAAEPVAEPVAEPVAEPVAEPVAPVQS DQSDQSDQSDQSDQSDQSDQSDQSDQSDRSESDSAPAPAAAPAPTPAPASEEVPPEHVKARRLARIIVSDIVLYNQAKFE QGVREGTFHQLLADDIREGENLYRQRVSQQVRDTTSFLKEAFEEVIAKKRAELNL
Sequences:
>Translated_375_residues MLIVCPNCKKRFNVDPGTPDQPKKLRCSNCRAVFRLVRKGERSEGAKSKLKVVIANESASFCQAVEKVLSHEPFQLFLCT DGKEALETVQQVTPDVLLLDVALPTMFGFEVCERVRQDPALANVKIVLIASIYDKTRYKRSPNSLYGADDYIEKHHIPDS LVPMIYRLASGSEPQAQSPTESELAEQEETRSEIRQCEVEETSTVEVAAPAAEPAAEPVAEPVAEPVAEPVAEPVAPVQS DQSDQSDQSDQSDQSDQSDQSDQSDQSDRSESDSAPAPAAAPAPTPAPASEEVPPEHVKARRLARIIVSDIVLYNQAKFE QGVREGTFHQLLADDIREGENLYRQRVSQQVRDTTSFLKEAFEEVIAKKRAELNL >Mature_375_residues MLIVCPNCKKRFNVDPGTPDQPKKLRCSNCRAVFRLVRKGERSEGAKSKLKVVIANESASFCQAVEKVLSHEPFQLFLCT DGKEALETVQQVTPDVLLLDVALPTMFGFEVCERVRQDPALANVKIVLIASIYDKTRYKRSPNSLYGADDYIEKHHIPDS LVPMIYRLASGSEPQAQSPTESELAEQEETRSEIRQCEVEETSTVEVAAPAAEPAAEPVAEPVAEPVAEPVAEPVAPVQS DQSDQSDQSDQSDQSDQSDQSDQSDQSDRSESDSAPAPAAAPAPTPAPASEEVPPEHVKARRLARIIVSDIVLYNQAKFE QGVREGTFHQLLADDIREGENLYRQRVSQQVRDTTSFLKEAFEEVIAKKRAELNL
Specific function: Member Of The Two-Component Regulatory System Baes/Baer. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41398; Mature: 41398
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIVCPNCKKRFNVDPGTPDQPKKLRCSNCRAVFRLVRKGERSEGAKSKLKVVIANESAS CEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHH FCQAVEKVLSHEPFQLFLCTDGKEALETVQQVTPDVLLLDVALPTMFGFEVCERVRQDPA HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC LANVKIVLIASIYDKTRYKRSPNSLYGADDYIEKHHIPDSLVPMIYRLASGSEPQAQSPT CCCEEEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC ESELAEQEETRSEIRQCEVEETSTVEVAAPAAEPAAEPVAEPVAEPVAEPVAEPVAPVQS HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC DQSDQSDQSDQSDQSDQSDQSDQSDQSDRSESDSAPAPAAAPAPTPAPASEEVPPEHVKA CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RRLARIIVSDIVLYNQAKFEQGVREGTFHQLLADDIREGENLYRQRVSQQVRDTTSFLKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFEEVIAKKRAELNL HHHHHHHHHHHHCCC >Mature Secondary Structure MLIVCPNCKKRFNVDPGTPDQPKKLRCSNCRAVFRLVRKGERSEGAKSKLKVVIANESAS CEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHH FCQAVEKVLSHEPFQLFLCTDGKEALETVQQVTPDVLLLDVALPTMFGFEVCERVRQDPA HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC LANVKIVLIASIYDKTRYKRSPNSLYGADDYIEKHHIPDSLVPMIYRLASGSEPQAQSPT CCCEEEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC ESELAEQEETRSEIRQCEVEETSTVEVAAPAAEPAAEPVAEPVAEPVAEPVAEPVAPVQS HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC DQSDQSDQSDQSDQSDQSDQSDQSDQSDRSESDSAPAPAAAPAPTPAPASEEVPPEHVKA CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RRLARIIVSDIVLYNQAKFEQGVREGTFHQLLADDIREGENLYRQRVSQQVRDTTSFLKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFEEVIAKKRAELNL HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA