Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
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Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is exeA [H]
Identifier: 197117136
GI number: 197117136
Start: 875796
End: 876596
Strand: Direct
Name: exeA [H]
Synonym: Gbem_0741
Alternate gene names: 197117136
Gene position: 875796-876596 (Clockwise)
Preceding gene: 197117135
Following gene: 197117137
Centisome position: 18.98
GC content: 63.67
Gene sequence:
>801_bases ATGTACAAAGAGTTTTACGGCCTGGCCGAAAAGCCGTTCAGCAAGACCCCGGATCCCCGTTTTCTCTACATGAGCTCGGG GCATCAGGAGGCCCTGGCGCGGCTTGAGTACGCGGTGGAAGAAAGCGAGATCGCCCTTTTGACCGGCGACATCGGCTGCG GCAAGACCACCATCTCTCGCGCGCTCATGGACCGGATGGGGGACCGCTACCACTTCCTGTTCGTGTTCAACCCGAGGCTC ACCGCGGACGAGCTTTTGCGCGTGATCGCGTCGGGGCTTCAGGTGGAGAGCCCCTCGCTGCAAAAAGACCTGCTGCTGCA GGAGATCACCGGCGCGCTATACCGCATGCACGGCGAGGGTCGCATCCCGGTGGTGGTAATCGACGAGGCGCAGCTGATCC CGGACCGCGAACTCTTCGACGAGCTGCGGCTGTTGACCAACTTCCAACTCGACGACATGAACCTGGTCAGCGTCATCGTC ATGGGGCAGCCGGAGCTGCGCGGTATGCTGGCTTCGCCGGTTTACGAGCCGTTCCGCCAGCGCATCTCGCTCAACTTCCA CCTGGCGCCGCTGGGGCTGGAGGAAACCCTGGAGTACCTCGATTTCCGCATCGTCGCGGCCGGCGGGGAGCCGGGGCTTT TCTCGCCCGACGCGGTGCAACGGATCTACGAGCTTTCCGGAGGGGTGCCGCGCAGGATCAACGCCGTGGCCACCAATGCG CTTCTCATCGGCTTTGGAAGGGACGCCTCCTGGATCGATGCCTCCATCGTCGAGGAGACCGCGGCGGAGCTGCTCTCCTA G
Upstream 100 bases:
>100_bases TCCGCGGCATCTCGGGAGCGGCGGACCTGGGGGACCAGCGCACCATCCTGGTGCTCGACGTGGGTAGCGTGATCGGCGAG GCGACCCGGGGGAGTGCCTG
Downstream 100 bases:
>100_bases CAATTTAAAGCAGCAGACAGAACGGACAACGGGTTTAGGGACTATGAATCTAGCCGAGATCAGAAAGAAGGCTCTCAGGG GAGAGACGCAAGGTACCGCC
Product: ATPase AAA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MYKEFYGLAEKPFSKTPDPRFLYMSSGHQEALARLEYAVEESEIALLTGDIGCGKTTISRALMDRMGDRYHFLFVFNPRL TADELLRVIASGLQVESPSLQKDLLLQEITGALYRMHGEGRIPVVVIDEAQLIPDRELFDELRLLTNFQLDDMNLVSVIV MGQPELRGMLASPVYEPFRQRISLNFHLAPLGLEETLEYLDFRIVAAGGEPGLFSPDAVQRIYELSGGVPRRINAVATNA LLIGFGRDASWIDASIVEETAAELLS
Sequences:
>Translated_266_residues MYKEFYGLAEKPFSKTPDPRFLYMSSGHQEALARLEYAVEESEIALLTGDIGCGKTTISRALMDRMGDRYHFLFVFNPRL TADELLRVIASGLQVESPSLQKDLLLQEITGALYRMHGEGRIPVVVIDEAQLIPDRELFDELRLLTNFQLDDMNLVSVIV MGQPELRGMLASPVYEPFRQRISLNFHLAPLGLEETLEYLDFRIVAAGGEPGLFSPDAVQRIYELSGGVPRRINAVATNA LLIGFGRDASWIDASIVEETAAELLS >Mature_266_residues MYKEFYGLAEKPFSKTPDPRFLYMSSGHQEALARLEYAVEESEIALLTGDIGCGKTTISRALMDRMGDRYHFLFVFNPRL TADELLRVIASGLQVESPSLQKDLLLQEITGALYRMHGEGRIPVVVIDEAQLIPDRELFDELRLLTNFQLDDMNLVSVIV MGQPELRGMLASPVYEPFRQRISLNFHLAPLGLEETLEYLDFRIVAAGGEPGLFSPDAVQRIYELSGGVPRRINAVATNA LLIGFGRDASWIDASIVEETAAELLS
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 29725; Mature: 29725
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKEFYGLAEKPFSKTPDPRFLYMSSGHQEALARLEYAVEESEIALLTGDIGCGKTTISR CCCHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH ALMDRMGDRYHFLFVFNPRLTADELLRVIASGLQVESPSLQKDLLLQEITGALYRMHGEG HHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEECCCC RIPVVVIDEAQLIPDRELFDELRLLTNFQLDDMNLVSVIVMGQPELRGMLASPVYEPFRQ CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH RISLNFHLAPLGLEETLEYLDFRIVAAGGEPGLFSPDAVQRIYELSGGVPRRINAVATNA HEECEEEEECCCHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHEECCE LLIGFGRDASWIDASIVEETAAELLS EEEEECCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MYKEFYGLAEKPFSKTPDPRFLYMSSGHQEALARLEYAVEESEIALLTGDIGCGKTTISR CCCHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH ALMDRMGDRYHFLFVFNPRLTADELLRVIASGLQVESPSLQKDLLLQEITGALYRMHGEG HHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEECCCC RIPVVVIDEAQLIPDRELFDELRLLTNFQLDDMNLVSVIVMGQPELRGMLASPVYEPFRQ CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH RISLNFHLAPLGLEETLEYLDFRIVAAGGEPGLFSPDAVQRIYELSGGVPRRINAVATNA HEECEEEEECCCHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHEECCE LLIGFGRDASWIDASIVEETAAELLS EEEEECCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]