| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is crcB
Identifier: 197117098
GI number: 197117098
Start: 831699
End: 832073
Strand: Direct
Name: crcB
Synonym: Gbem_0702
Alternate gene names: 197117098
Gene position: 831699-832073 (Clockwise)
Preceding gene: 197117097
Following gene: 197117099
Centisome position: 18.02
GC content: 57.33
Gene sequence:
>375_bases ATGGAGCAGTTGGTCTACATAGCGCTTTTAGGCGCCCTCGGTTGTCTCTGCCGTTATTTCCTTTCCGGCTTTGTCTATCA GGTTTTCGGCACCTCCTTTCCCTATGGAACCCTTGCCGTGAACCTGATCGGGGCTTTCCTGATCGGGCTCATCATGGAGT TTTCCGTGAGGAGCGCCGCCATTCCCCCCACCCTGCGCTTTGCCATCACCATAGGGTTTCTCGGGGGACTCACCACCTTT TCCACCTTCAGTTTCGAGACCTTCCGGCTTTTGGAAGACGGCGCGCTGCTGATCGCTATCGTCAACGTCCTGGTCAGCGT CGTCGCCTGCCTTACCTGCACCTGGATCGGGATCATGGTGGCGCGTGCGCTTTAG
Upstream 100 bases:
>100_bases GCAGGAGACACGCTACCTTCAGCCCGAATCCTCCTCCGACATCTTCGGCGCGAGCCTCGGATGGAGCTTCTGACATCACC GATCCAGGGCGGTTCCCCAC
Downstream 100 bases:
>100_bases GCCATTCGGCAGGGAACCGGCAACCGCTTCAACCTGGCAGCTATATTAAATAGGAGATTGCATGGACAGCAGGAACATGA CGCTGGAAGAAGACAGAAAC
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MEQLVYIALLGALGCLCRYFLSGFVYQVFGTSFPYGTLAVNLIGAFLIGLIMEFSVRSAAIPPTLRFAITIGFLGGLTTF STFSFETFRLLEDGALLIAIVNVLVSVVACLTCTWIGIMVARAL
Sequences:
>Translated_124_residues MEQLVYIALLGALGCLCRYFLSGFVYQVFGTSFPYGTLAVNLIGAFLIGLIMEFSVRSAAIPPTLRFAITIGFLGGLTTF STFSFETFRLLEDGALLIAIVNVLVSVVACLTCTWIGIMVARAL >Mature_124_residues MEQLVYIALLGALGCLCRYFLSGFVYQVFGTSFPYGTLAVNLIGAFLIGLIMEFSVRSAAIPPTLRFAITIGFLGGLTTF STFSFETFRLLEDGALLIAIVNVLVSVVACLTCTWIGIMVARAL
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
Organism=Escherichia coli, GI1786842, Length=114, Percent_Identity=38.5964912280702, Blast_Score=72, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB_GEOBB (B5EDZ1)
Other databases:
- EMBL: CP001124 - RefSeq: YP_002137525.1 - GeneID: 6783535 - GenomeReviews: CP001124_GR - KEGG: gbm:Gbem_0702 - HOGENOM: HBG753179 - OMA: SEWSIAF - ProtClustDB: PRK14222 - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 13374; Mature: 13374
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x26a99fac)-; HASH(0x276f8e2c)-; HASH(0x276a2694)-; HASH(0x2775496c)-;
Cys/Met content:
3.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQLVYIALLGALGCLCRYFLSGFVYQVFGTSFPYGTLAVNLIGAFLIGLIMEFSVRSAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC IPPTLRFAITIGFLGGLTTFSTFSFETFRLLEDGALLIAIVNVLVSVVACLTCTWIGIMV CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH ARAL HHCH >Mature Secondary Structure MEQLVYIALLGALGCLCRYFLSGFVYQVFGTSFPYGTLAVNLIGAFLIGLIMEFSVRSAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC IPPTLRFAITIGFLGGLTTFSTFSFETFRLLEDGALLIAIVNVLVSVVACLTCTWIGIMV CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH ARAL HHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA