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The map label for this gene is ompR [H]

Identifier: 197117077

GI number: 197117077

Start: 804484

End: 806403

Strand: Reverse

Name: ompR [H]

Synonym: Gbem_0681

Alternate gene names: 197117077

Gene position: 806403-804484 (Counterclockwise)

Preceding gene: 197117078

Following gene: 197117075

Centisome position: 17.47

GC content: 63.96

Gene sequence:

>1920_bases
GTGAAACACCGCATCCTTCTGGTCGAGGACAACGACCGCCTGGCGGGGATGCTGACCAGCTTCCTCGCGTCGCTCGGGCA
CGAGGTGCTAGCTTTGGCCGACGCCGAGACGGCGCTAGCCCTCCTCGGGAAGGAAAAAATCGACCTGCTGGTCCTGGACC
TGAAACTCGCCGGGATGAACGGGGTGGAACTGCTGCAGCGGGTGCGCAGGAACCCGGAGCTGAAAGAGCTCCCGGCAATC
ATCATGACCGGCGTTTTCCGCGGCGAGGGATACGCGCGGGCAGCCGCGAAGCTTGGGGTAAAGGCGTATCTGGAGAAGCC
GTTTGGCAAGGACGCCTTTCTTGAGGCAGTCGGCGCCGCCCTCGCCCCGCCGCCGGGACCAAGGGAGTTATCAGCCATGC
TGCTCGACCTCTACCATAACGGCAAAAGCGGCGTACTTCAGTTGGGAGGCGGGACGCGCGTCGTTTTTCTCGCCGGGGAA
CCCGCCTCTTTCTCCTCGCCCGGGTTCGTCCCGTTCCTGTTGGCGGAGGGGCGCCTGTTGCGCGGCGACCTGGAGAAGTA
CCCGCTCAGCCGGCCAGGCAAGATGCCGCTTTGCGAGGCGGGGCTTTTGAACTACGACGAACTACAGGAGCAGTCGCGCC
TGTTCCTCTCCAAGGTCCTGGTCGAGGCGGTGCTGCAGAATCAGCCCCCGCAGTTTCTGCCGGACGTAGGCGCCATCGAG
CCCCCGCTCACGCCCCTTTCGTTGCCGCGCCTGCTGTACCAGGCGGCGAAACAGGGGGCCGACCGTTTCGGGGCCGACAG
CTTCCTGAACCGTACCGGAGCGCTCTTCCCCTTGAGAACGGAGAGGTACTTCCGCCTAGCCAACCTGCTGGGGCTGGGCC
CCGAGGAGATAGGAGTACTGGAGCAGTTGGGGCAGGGTAAAAGCGTCCGGGAGATCTTCGCCTCAGCCCCCCCCGCGCGG
CAGGCGTGGTTCCTCGATTTCCTGGTGCGGATGGGCATGGTGAACCTCGCCCTGGAACCGGCCGAGGACCGGGATGCGGG
TTTCCCCCAGAAGATGCTCTTCAACCGCCCGATCGAAGAGGTGGTCGAGGTGGAGGTCCAGGGGATGAGCTTCGAAGACC
TGGTGGACGAGGTCTCGGACTCCATCGACCTGGCGGTGGGCGAGACCGGCATGGCCGCGCCGCTTTCGGCAAGCGAGATC
GACTTCGAGCAGGAGGTCCAGCGCGACTACGCCGCCATCCAGAACAAGAACTACTACGAGATCTTCGGGCTCTCCCAGGC
TAATTTCAGCTTCGCGAGCCTCAAGGAATCCTATTTCTCCAAGACGCGCCAGTACTCCCCGGAAAAGTTCATGCAGCTTT
CCGGCGACACCCTCTCCCGCGCGCAGGACGTCCTATCCCACTACGCCAACGCCTACAACACCCTCTCCAGCGTCATCGCC
AAGGAGCGCTACGACGAGATGCTGAACGCCAACGTGATCGGCCTCGGAGGGCGCCAGGAAGACGCACTCCAGGCGCGCAT
ACAGTTCCAGTCCGGCAAGGTCTTCCTGGAGATGGAGGACTACAAAAACGCCGAGCGCGCCCTGCAGGATGCCTACACCC
TCGACGCGGAGGACTCGCAGACCAGCGCCTATCTGGCCTGGTCCATCTACAAGAACCCCGCCAACCACGGGTCTCAGGTC
GCGCTGGAAAAGTGCCGCATGCTCCTCTCCAAGAGCCTGCAGATGGGGCGCAGCGCCGAGGCTTTCGCCTTCCGGGGGTG
CATGCTGCTGGACGAGGGAAGAGACGGGCTCGCCGAGGGTGAATTCCAGAAGGCGCTCAGGCTGAACCCGCAAGAGCGGC
ATGCCCTGGGGGGGATGCGGCTGATCCGGGAAAGGCACGAAGCCGAGAAGAAGGGACTCTTCAAGAGGATCTTCGGTTAG

Upstream 100 bases:

>100_bases
GCGGCGACGGGAGCCACCAGTTCTCGCGGGACCTGGCTTCCCACAACAACGCCGTGAACAAGTACCTGAAGGCACCGCCA
GCGCCCCCGAGAGGGACCAA

Downstream 100 bases:

>100_bases
CCGCGCCGCGCCCCGCCACGAACAAATTCCCTCTCATTGGAAAGCCTGCCCTGCGCAGGCTTTTTTAGTTCATTAGAAAT
CGCGGCCTCTCCGCACCTCC

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 639; Mature: 639

Protein sequence:

>639_residues
MKHRILLVEDNDRLAGMLTSFLASLGHEVLALADAETALALLGKEKIDLLVLDLKLAGMNGVELLQRVRRNPELKELPAI
IMTGVFRGEGYARAAAKLGVKAYLEKPFGKDAFLEAVGAALAPPPGPRELSAMLLDLYHNGKSGVLQLGGGTRVVFLAGE
PASFSSPGFVPFLLAEGRLLRGDLEKYPLSRPGKMPLCEAGLLNYDELQEQSRLFLSKVLVEAVLQNQPPQFLPDVGAIE
PPLTPLSLPRLLYQAAKQGADRFGADSFLNRTGALFPLRTERYFRLANLLGLGPEEIGVLEQLGQGKSVREIFASAPPAR
QAWFLDFLVRMGMVNLALEPAEDRDAGFPQKMLFNRPIEEVVEVEVQGMSFEDLVDEVSDSIDLAVGETGMAAPLSASEI
DFEQEVQRDYAAIQNKNYYEIFGLSQANFSFASLKESYFSKTRQYSPEKFMQLSGDTLSRAQDVLSHYANAYNTLSSVIA
KERYDEMLNANVIGLGGRQEDALQARIQFQSGKVFLEMEDYKNAERALQDAYTLDAEDSQTSAYLAWSIYKNPANHGSQV
ALEKCRMLLSKSLQMGRSAEAFAFRGCMLLDEGRDGLAEGEFQKALRLNPQERHALGGMRLIRERHEAEKKGLFKRIFG

Sequences:

>Translated_639_residues
MKHRILLVEDNDRLAGMLTSFLASLGHEVLALADAETALALLGKEKIDLLVLDLKLAGMNGVELLQRVRRNPELKELPAI
IMTGVFRGEGYARAAAKLGVKAYLEKPFGKDAFLEAVGAALAPPPGPRELSAMLLDLYHNGKSGVLQLGGGTRVVFLAGE
PASFSSPGFVPFLLAEGRLLRGDLEKYPLSRPGKMPLCEAGLLNYDELQEQSRLFLSKVLVEAVLQNQPPQFLPDVGAIE
PPLTPLSLPRLLYQAAKQGADRFGADSFLNRTGALFPLRTERYFRLANLLGLGPEEIGVLEQLGQGKSVREIFASAPPAR
QAWFLDFLVRMGMVNLALEPAEDRDAGFPQKMLFNRPIEEVVEVEVQGMSFEDLVDEVSDSIDLAVGETGMAAPLSASEI
DFEQEVQRDYAAIQNKNYYEIFGLSQANFSFASLKESYFSKTRQYSPEKFMQLSGDTLSRAQDVLSHYANAYNTLSSVIA
KERYDEMLNANVIGLGGRQEDALQARIQFQSGKVFLEMEDYKNAERALQDAYTLDAEDSQTSAYLAWSIYKNPANHGSQV
ALEKCRMLLSKSLQMGRSAEAFAFRGCMLLDEGRDGLAEGEFQKALRLNPQERHALGGMRLIRERHEAEKKGLFKRIFG
>Mature_639_residues
MKHRILLVEDNDRLAGMLTSFLASLGHEVLALADAETALALLGKEKIDLLVLDLKLAGMNGVELLQRVRRNPELKELPAI
IMTGVFRGEGYARAAAKLGVKAYLEKPFGKDAFLEAVGAALAPPPGPRELSAMLLDLYHNGKSGVLQLGGGTRVVFLAGE
PASFSSPGFVPFLLAEGRLLRGDLEKYPLSRPGKMPLCEAGLLNYDELQEQSRLFLSKVLVEAVLQNQPPQFLPDVGAIE
PPLTPLSLPRLLYQAAKQGADRFGADSFLNRTGALFPLRTERYFRLANLLGLGPEEIGVLEQLGQGKSVREIFASAPPAR
QAWFLDFLVRMGMVNLALEPAEDRDAGFPQKMLFNRPIEEVVEVEVQGMSFEDLVDEVSDSIDLAVGETGMAAPLSASEI
DFEQEVQRDYAAIQNKNYYEIFGLSQANFSFASLKESYFSKTRQYSPEKFMQLSGDTLSRAQDVLSHYANAYNTLSSVIA
KERYDEMLNANVIGLGGRQEDALQARIQFQSGKVFLEMEDYKNAERALQDAYTLDAEDSQTSAYLAWSIYKNPANHGSQV
ALEKCRMLLSKSLQMGRSAEAFAFRGCMLLDEGRDGLAEGEFQKALRLNPQERHALGGMRLIRERHEAEKKGLFKRIFG

Specific function: The N-terminus of this protein is required for the transcriptional expression of both major outer membrane protein genes ompF and ompC; its C-terminal moiety mediates the multimerization of the ompR protein. As a multimer, it turns on the expression of th

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=175, Percent_Identity=31.4285714285714, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 70660; Mature: 70660

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50005 TPR ; PS50293 TPR_REGION ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHRILLVEDNDRLAGMLTSFLASLGHEVLALADAETALALLGKEKIDLLVLDLKLAGMN
CCCEEEEEECCCHHHHHHHHHHHHHCHHHEEHHHHHHHHHHHCCCCCCEEEEEEEECCCC
GVELLQRVRRNPELKELPAIIMTGVFRGEGYARAAAKLGVKAYLEKPFGKDAFLEAVGAA
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LAPPPGPRELSAMLLDLYHNGKSGVLQLGGGTRVVFLAGEPASFSSPGFVPFLLAEGRLL
CCCCCCHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCCCCCCCCCCHHHHHCCCHH
RGDLEKYPLSRPGKMPLCEAGLLNYDELQEQSRLFLSKVLVEAVLQNQPPQFLPDVGAIE
CCCHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PPLTPLSLPRLLYQAAKQGADRFGADSFLNRTGALFPLRTERYFRLANLLGLGPEEIGVL
CCCCCHHHHHHHHHHHHHCHHHCCHHHHHHCCCCEEEECHHHHHHHHHHHCCCHHHHHHH
EQLGQGKSVREIFASAPPARQAWFLDFLVRMGMVNLALEPAEDRDAGFPQKMLFNRPIEE
HHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHCCCHHH
VVEVEVQGMSFEDLVDEVSDSIDLAVGETGMAAPLSASEIDFEQEVQRDYAAIQNKNYYE
HHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCEEE
IFGLSQANFSFASLKESYFSKTRQYSPEKFMQLSGDTLSRAQDVLSHYANAYNTLSSVIA
EEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KERYDEMLNANVIGLGGRQEDALQARIQFQSGKVFLEMEDYKNAERALQDAYTLDAEDSQ
HHHHHHHHCCCEEECCCCCHHHHHHHEEEECCCEEEEEHHHCCHHHHHHHHHCCCCCCCC
TSAYLAWSIYKNPANHGSQVALEKCRMLLSKSLQMGRSAEAFAFRGCMLLDEGRDGLAEG
CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCEEEEECCCCCCCCH
EFQKALRLNPQERHALGGMRLIRERHEAEKKGLFKRIFG
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKHRILLVEDNDRLAGMLTSFLASLGHEVLALADAETALALLGKEKIDLLVLDLKLAGMN
CCCEEEEEECCCHHHHHHHHHHHHHCHHHEEHHHHHHHHHHHCCCCCCEEEEEEEECCCC
GVELLQRVRRNPELKELPAIIMTGVFRGEGYARAAAKLGVKAYLEKPFGKDAFLEAVGAA
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LAPPPGPRELSAMLLDLYHNGKSGVLQLGGGTRVVFLAGEPASFSSPGFVPFLLAEGRLL
CCCCCCHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCCCCCCCCCCHHHHHCCCHH
RGDLEKYPLSRPGKMPLCEAGLLNYDELQEQSRLFLSKVLVEAVLQNQPPQFLPDVGAIE
CCCHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PPLTPLSLPRLLYQAAKQGADRFGADSFLNRTGALFPLRTERYFRLANLLGLGPEEIGVL
CCCCCHHHHHHHHHHHHHCHHHCCHHHHHHCCCCEEEECHHHHHHHHHHHCCCHHHHHHH
EQLGQGKSVREIFASAPPARQAWFLDFLVRMGMVNLALEPAEDRDAGFPQKMLFNRPIEE
HHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHCCCHHH
VVEVEVQGMSFEDLVDEVSDSIDLAVGETGMAAPLSASEIDFEQEVQRDYAAIQNKNYYE
HHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCEEE
IFGLSQANFSFASLKESYFSKTRQYSPEKFMQLSGDTLSRAQDVLSHYANAYNTLSSVIA
EEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KERYDEMLNANVIGLGGRQEDALQARIQFQSGKVFLEMEDYKNAERALQDAYTLDAEDSQ
HHHHHHHHCCCEEECCCCCHHHHHHHEEEECCCEEEEEHHHCCHHHHHHHHHCCCCCCCC
TSAYLAWSIYKNPANHGSQVALEKCRMLLSKSLQMGRSAEAFAFRGCMLLDEGRDGLAEG
CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCEEEEECCCCCCCCH
EFQKALRLNPQERHALGGMRLIRERHEAEKKGLFKRIFG
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]