| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117074
Identifier: 197117074
GI number: 197117074
Start: 802126
End: 802671
Strand: Direct
Name: 197117074
Synonym: Gbem_0678
Alternate gene names: NA
Gene position: 802126-802671 (Clockwise)
Preceding gene: 197117073
Following gene: 197117079
Centisome position: 17.38
GC content: 60.99
Gene sequence:
>546_bases ATGTCAGGCCATGTCATAGAACAGATAAAGACCAAGCCGGCTGCCGCTTTGGACCGGAGCGTAGAGAGTTCGATTGCTGC CAACCGCTGCCGCGAAGAGCTGGCCAGAAACATCGACGAACTGCACGCGCTTTCCCGCAGGGGACTCTGGGGACTGCTAC TGTTCCTTGGCGTGAGCGCTGCCGCCCTTTACCTGAGCCAGATGGAAGCGTGCAGCCTGATCCAGCTCCAGTTGAAGGAG ATCTTCGGACCTCCCCCCCCTAGCGATCTGTTGCATGTGGTGCTGGCCGTTTCCTGGCTCTCGGGTTTCGTGCTGATCCT GGGGCGCCGGGGGGCGGACGGCAAACCTGGCTACAACTGGTGCAACATTGCGCTTCCCACCGCCTTCTACCCGCTCTACG TCTTCTCCGATGCAGCCGGCGGCTACTTTCCCGCGGTCTTTTGCGCCGGGCTCGTCCTCTTGCTTTTGGAACACGGCTTT GCCGTGTGCTATGCCCGCAAGGTGATCCGCGAGGCCAACGATAGACTCAGCCGGCTTCCCCTATGA
Upstream 100 bases:
>100_bases GCCCGGTGCGCCACTACCCCGAGTACGCCGAGATGCAGCATGAGCAGCGACAAGGATAGTTGTTCCTACGGGCTGCTCCC TTAGGGAAAGGAGAAACGCC
Downstream 100 bases:
>100_bases CAAAAGCCACAACCGCAGCGACCGATACGAAACCGGCCACTCGTCATCGAGCGGCCGGTCTCGTTTTTACCGCTAGCCGC GCTGGTGACAGGAGTCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MSGHVIEQIKTKPAAALDRSVESSIAANRCREELARNIDELHALSRRGLWGLLLFLGVSAAALYLSQMEACSLIQLQLKE IFGPPPPSDLLHVVLAVSWLSGFVLILGRRGADGKPGYNWCNIALPTAFYPLYVFSDAAGGYFPAVFCAGLVLLLLEHGF AVCYARKVIREANDRLSRLPL
Sequences:
>Translated_181_residues MSGHVIEQIKTKPAAALDRSVESSIAANRCREELARNIDELHALSRRGLWGLLLFLGVSAAALYLSQMEACSLIQLQLKE IFGPPPPSDLLHVVLAVSWLSGFVLILGRRGADGKPGYNWCNIALPTAFYPLYVFSDAAGGYFPAVFCAGLVLLLLEHGF AVCYARKVIREANDRLSRLPL >Mature_180_residues SGHVIEQIKTKPAAALDRSVESSIAANRCREELARNIDELHALSRRGLWGLLLFLGVSAAALYLSQMEACSLIQLQLKEI FGPPPPSDLLHVVLAVSWLSGFVLILGRRGADGKPGYNWCNIALPTAFYPLYVFSDAAGGYFPAVFCAGLVLLLLEHGFA VCYARKVIREANDRLSRLPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19781; Mature: 19650
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGHVIEQIKTKPAAALDRSVESSIAANRCREELARNIDELHALSRRGLWGLLLFLGVSA CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH AALYLSQMEACSLIQLQLKEIFGPPPPSDLLHVVLAVSWLSGFVLILGRRGADGKPGYNW HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE CNIALPTAFYPLYVFSDAAGGYFPAVFCAGLVLLLLEHGFAVCYARKVIREANDRLSRLP EEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC L C >Mature Secondary Structure SGHVIEQIKTKPAAALDRSVESSIAANRCREELARNIDELHALSRRGLWGLLLFLGVSA CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH AALYLSQMEACSLIQLQLKEIFGPPPPSDLLHVVLAVSWLSGFVLILGRRGADGKPGYNW HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE CNIALPTAFYPLYVFSDAAGGYFPAVFCAGLVLLLLEHGFAVCYARKVIREANDRLSRLP EEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA