| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is folK [H]
Identifier: 197117005
GI number: 197117005
Start: 729656
End: 730144
Strand: Direct
Name: folK [H]
Synonym: Gbem_0608
Alternate gene names: 197117005
Gene position: 729656-730144 (Clockwise)
Preceding gene: 197117002
Following gene: 197117006
Centisome position: 15.81
GC content: 64.83
Gene sequence:
>489_bases GTGGAAGAGCGCGCCTACATAGGGTTGGGGAGCAACCTCGGCGACCGCGAGCTGAAGCTACTGATGGCCGTCGCCGAACT GGGGAAGCTCCCCGGAACGCGGGTCACCGGCGTGTCCCAGTTCTACGAGACCGAGCCCGTGGGGGGCGTTCCCCAGGACA ACTTCTACAACGCCGTGGCGCGCATTGAAACGACACTCTCTCCTTTCCTGCTCCTGGACGAGTTGAAGCGGGTGGAGACC GAAGTCTTCCAGCGCAAGCCTTCAGAGCGCTGGGGCGCCCGCAGCATGGACCTGGACATCCTCCTCTACGGGGAGCTGGT GCTCGACTCGGACCGGCTCACCATTCCGCACCCGCGCCTGGCGGAGCGGCGTTTCGCGCTGCAGCCGCTGGCCGACCTCG CCCCCGACCTAGTGTATCCCGTCACAGGCAAAACCGTCTCGCAGCTTTTGGCTGCACTTACCGCCACCGAGAAGGTGGTC AAGCTTTAG
Upstream 100 bases:
>100_bases AAAACAGCACTGGCGCGGGGTCGCGCCGGGCCCGGCGCGCTTTTAGCTCATGAGCGGCCGGGGTTGAAAAAAATAAGGAA TTGTGCTCTAATCCCACGCT
Downstream 100 bases:
>100_bases GGGGAAGGTGTGAAGATACTGATCTGGGTGCTCCTTGGCTACCTCGCCTACCGGATGCTCAAGGGGAAGTCCGAGGCGAA GATCGCCAAAAAGGAACCGG
Product: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase
Products: NA
Alternate protein names: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; PPPK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; HPPK [H]
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MEERAYIGLGSNLGDRELKLLMAVAELGKLPGTRVTGVSQFYETEPVGGVPQDNFYNAVARIETTLSPFLLLDELKRVET EVFQRKPSERWGARSMDLDILLYGELVLDSDRLTIPHPRLAERRFALQPLADLAPDLVYPVTGKTVSQLLAALTATEKVV KL
Sequences:
>Translated_162_residues MEERAYIGLGSNLGDRELKLLMAVAELGKLPGTRVTGVSQFYETEPVGGVPQDNFYNAVARIETTLSPFLLLDELKRVET EVFQRKPSERWGARSMDLDILLYGELVLDSDRLTIPHPRLAERRFALQPLADLAPDLVYPVTGKTVSQLLAALTATEKVV KL >Mature_162_residues MEERAYIGLGSNLGDRELKLLMAVAELGKLPGTRVTGVSQFYETEPVGGVPQDNFYNAVARIETTLSPFLLLDELKRVET EVFQRKPSERWGARSMDLDILLYGELVLDSDRLTIPHPRLAERRFALQPLADLAPDLVYPVTGKTVSQLLAALTATEKVV KL
Specific function: Dihydrofolate biosynthesis; first step. [C]
COG id: COG0801
COG function: function code H; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HPPK family [H]
Homologues:
Organism=Escherichia coli, GI1786335, Length=146, Percent_Identity=40.4109589041096, Blast_Score=119, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6324073, Length=157, Percent_Identity=35.6687898089172, Blast_Score=99, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000550 [H]
Pfam domain/function: PF01288 HPPK [H]
EC number: =2.7.6.3 [H]
Molecular weight: Translated: 18025; Mature: 18025
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00794 HPPK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEERAYIGLGSNLGDRELKLLMAVAELGKLPGTRVTGVSQFYETEPVGGVPQDNFYNAVA CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH RIETTLSPFLLLDELKRVETEVFQRKPSERWGARSMDLDILLYGELVLDSDRLTIPHPRL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEEEEEECCCCCCCCCCHH AERRFALQPLADLAPDLVYPVTGKTVSQLLAALTATEKVVKL HHHHHHHCCHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEERAYIGLGSNLGDRELKLLMAVAELGKLPGTRVTGVSQFYETEPVGGVPQDNFYNAVA CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH RIETTLSPFLLLDELKRVETEVFQRKPSERWGARSMDLDILLYGELVLDSDRLTIPHPRL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEEEEEECCCCCCCCCCHH AERRFALQPLADLAPDLVYPVTGKTVSQLLAALTATEKVVKL HHHHHHHCCHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10080886 [H]