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The map label for this gene is yjbQ [C]

Identifier: 197117003

GI number: 197117003

Start: 728503

End: 728901

Strand: Reverse

Name: yjbQ [C]

Synonym: Gbem_0606

Alternate gene names: 197117003

Gene position: 728901-728503 (Counterclockwise)

Preceding gene: 197117004

Following gene: 197116999

Centisome position: 15.79

GC content: 63.66

Gene sequence:

>399_bases
ATGATACATTACCTGACGCTGAAGAGCAGGGAGAGGACCGAGCTGATCGACATCACGGCGCGGGTGGAGGATCTCATCGC
CGCTTCCAGTATCGGCAGCGGATGCTGCGAGATCTTTGTCCTCCACACGACGGCGGCCGTCACGGTCAACGAAGGGGCCG
ACCCGGCGGTCAAGCGCGACATCAGCAACTGCCTGGACCGGCTGGTGCCGGACGCGCACTACTTCACCCACGCCGAAGGG
AACTCCGCGGCGCACGTGAAAGCGAGCATGATCGGGAGCTCGGAGCGGCTCCTGGTGGACCGGGGGAAGCTTCTTTTGGG
AACCTGGCAGGTGCTTTACTTCTGCGAGTTCGACGGCCCCAGGGAGCGCCGCGTCGCGGTGAAAATCTGCGGCGAATAG

Upstream 100 bases:

>100_bases
ATGAGGAACAACTTTTTCAAGAAGGACCGTTAGGCAGGGGCTAGGGACTGGGGACTAGGGGCTGGCAAAGGCCGCTAAGC
AGGGGCTAGGGAGGGTGAGG

Downstream 100 bases:

>100_bases
AAAAAACTGCCTTTACCCGAAATGGTCGAAGCCGCCGTGGCCCGGGGCGTAGACGCCCCCACCGGGGGTGACGAGCTTTA
CTTCCGGGGTGGCGGTAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MIHYLTLKSRERTELIDITARVEDLIAASSIGSGCCEIFVLHTTAAVTVNEGADPAVKRDISNCLDRLVPDAHYFTHAEG
NSAAHVKASMIGSSERLLVDRGKLLLGTWQVLYFCEFDGPRERRVAVKICGE

Sequences:

>Translated_132_residues
MIHYLTLKSRERTELIDITARVEDLIAASSIGSGCCEIFVLHTTAAVTVNEGADPAVKRDISNCLDRLVPDAHYFTHAEG
NSAAHVKASMIGSSERLLVDRGKLLLGTWQVLYFCEFDGPRERRVAVKICGE
>Mature_132_residues
MIHYLTLKSRERTELIDITARVEDLIAASSIGSGCCEIFVLHTTAAVTVNEGADPAVKRDISNCLDRLVPDAHYFTHAEG
NSAAHVKASMIGSSERLLVDRGKLLLGTWQVLYFCEFDGPRERRVAVKICGE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=132, Percent_Identity=31.0606060606061, Blast_Score=68, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221476594, Length=102, Percent_Identity=38.2352941176471, Blast_Score=75, Evalue=9e-15,
Organism=Drosophila melanogaster, GI221476589, Length=102, Percent_Identity=38.2352941176471, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 14533; Mature: 14533

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHYLTLKSRERTELIDITARVEDLIAASSIGSGCCEIFVLHTTAAVTVNEGADPAVKRD
CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCHHHHHH
ISNCLDRLVPDAHYFTHAEGNSAAHVKASMIGSSERLLVDRGKLLLGTWQVLYFCEFDGP
HHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCCCEEEEECCCEEEEEEEEEEEEECCCC
RERRVAVKICGE
CCEEEEEEEECC
>Mature Secondary Structure
MIHYLTLKSRERTELIDITARVEDLIAASSIGSGCCEIFVLHTTAAVTVNEGADPAVKRD
CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCHHHHHH
ISNCLDRLVPDAHYFTHAEGNSAAHVKASMIGSSERLLVDRGKLLLGTWQVLYFCEFDGP
HHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCCCEEEEECCCEEEEEEEEEEEEECCCC
RERRVAVKICGE
CCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]