| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is thiL [H]
Identifier: 197117002
GI number: 197117002
Start: 727516
End: 728490
Strand: Direct
Name: thiL [H]
Synonym: Gbem_0605
Alternate gene names: 197117002
Gene position: 727516-728490 (Clockwise)
Preceding gene: 197117001
Following gene: 197117005
Centisome position: 15.76
GC content: 65.64
Gene sequence:
>975_bases TTGAGACTGGCGGAACTGGGCGAATTCGGCCTGATCGACCGCATCAAGAAAAATGTCGCCGCGTCCCCCTCGGTGCTTCT AGGCATCGGGGATGACGCGGCGGCTCTCGTTCCTGCTCCGGAATGTGTCACCCTGATCACCTGCGACATGCTTCTCGAGT CTGTCCACTTCGACCTCTCCTTTTGCGACCCGGAAAGCCTCGGCAGAAAATCCCTTTCGGTGAATCTCTCGGACCTGGCG GCGATGGGTGCCCACCCACGCCAGTTCCTGCTCGGCATCGCCCTCGGGAAGGAAGTCCCGATCGAGTTCATGGACCGCTT CATGGCGGGGGTGCTGGAGCAGGCCGAGCGCTTCGGCGCCACCCTGGTAGGGGGCGACACCTGCGCCTCCAAGGGGGGGA TAGCCATCTCCATCACGGCCTTGGGCGAGCAGCGCCCGGAGCTGGTGCTGAAGCGAAGCGGCGCGCGTCCGGGGGACCTC ATCTGCCTATCCGGTACGGTGGGCGACGCAGCGGCGGGGCTTGTGGCGCTTCGACAAGGGGTGCGGGAAGGTTTTCTGGT GTCGCGCCAGCTCGACCCGACCCCCAGGGTTGCCGCCGGGGTGGCGCTCGCCGAAGGCGGGCTCGCCACTGCGATGATCG ACGTAAGTGACGGTGTTTTGGGGGATTTGGGGCACATCCGCGAGATGTCCGGGGTGGGCGCCAGGCTTGAACTCGCCAAG CTGCCGCTTTCGGACGAGTACCGGGCCGCCTGCGGCGACGACCCGTATGCGCTGGCGCTTTCGGGAGGGGAGGACTACGA GCTTTTGTTCTGTATCGCCCCGGGAAAGAGGGGGGAGGTGGAGGCGCTTTTCGCTAAGCTGGCGCTTAGGCTTTCGGTGA TCGGCGAGATTACCGCCACCCCGGAAGTAAAGCTCGTCACCCCCGGTGGGGGCGTCTACGCCCCGGGCCACGGCGGCTTC GACCATTTCGGGTAA
Upstream 100 bases:
>100_bases CTCGGGCGGCCTCGAAGCCCAAGCCCTCCAAGACCGAGCCCCCGAAGAGCAAGGTTGCCCGACGGGTCACCGTTCCCCCC ACCGGGGTGAGGGGCAAGGC
Downstream 100 bases:
>100_bases AGGCAGTTTTTTCTATTCGCCGCAGATTTTCACCGCGACGCGGCGCTCCCTGGGGCCGTCGAACTCGCAGAAGTAAAGCA CCTGCCAGGTTCCCAAAAGA
Product: thiamin monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MRLAELGEFGLIDRIKKNVAASPSVLLGIGDDAAALVPAPECVTLITCDMLLESVHFDLSFCDPESLGRKSLSVNLSDLA AMGAHPRQFLLGIALGKEVPIEFMDRFMAGVLEQAERFGATLVGGDTCASKGGIAISITALGEQRPELVLKRSGARPGDL ICLSGTVGDAAAGLVALRQGVREGFLVSRQLDPTPRVAAGVALAEGGLATAMIDVSDGVLGDLGHIREMSGVGARLELAK LPLSDEYRAACGDDPYALALSGGEDYELLFCIAPGKRGEVEALFAKLALRLSVIGEITATPEVKLVTPGGGVYAPGHGGF DHFG
Sequences:
>Translated_324_residues MRLAELGEFGLIDRIKKNVAASPSVLLGIGDDAAALVPAPECVTLITCDMLLESVHFDLSFCDPESLGRKSLSVNLSDLA AMGAHPRQFLLGIALGKEVPIEFMDRFMAGVLEQAERFGATLVGGDTCASKGGIAISITALGEQRPELVLKRSGARPGDL ICLSGTVGDAAAGLVALRQGVREGFLVSRQLDPTPRVAAGVALAEGGLATAMIDVSDGVLGDLGHIREMSGVGARLELAK LPLSDEYRAACGDDPYALALSGGEDYELLFCIAPGKRGEVEALFAKLALRLSVIGEITATPEVKLVTPGGGVYAPGHGGF DHFG >Mature_324_residues MRLAELGEFGLIDRIKKNVAASPSVLLGIGDDAAALVPAPECVTLITCDMLLESVHFDLSFCDPESLGRKSLSVNLSDLA AMGAHPRQFLLGIALGKEVPIEFMDRFMAGVLEQAERFGATLVGGDTCASKGGIAISITALGEQRPELVLKRSGARPGDL ICLSGTVGDAAAGLVALRQGVREGFLVSRQLDPTPRVAAGVALAEGGLATAMIDVSDGVLGDLGHIREMSGVGARLELAK LPLSDEYRAACGDDPYALALSGGEDYELLFCIAPGKRGEVEALFAKLALRLSVIGEITATPEVKLVTPGGGVYAPGHGGF DHFG
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=326, Percent_Identity=39.5705521472393, Blast_Score=181, Evalue=8e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 33566; Mature: 33566
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLAELGEFGLIDRIKKNVAASPSVLLGIGDDAAALVPAPECVTLITCDMLLESVHFDLS CCCHHCCCCCHHHHHHHHHCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHHHHCCCEE FCDPESLGRKSLSVNLSDLAAMGAHPRQFLLGIALGKEVPIEFMDRFMAGVLEQAERFGA ECCHHHHCCCEEEEEHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC TLVGGDTCASKGGIAISITALGEQRPELVLKRSGARPGDLICLSGTVGDAAAGLVALRQG EEECCCCCCCCCCEEEEEEECCCCCCHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHH VREGFLVSRQLDPTPRVAAGVALAEGGLATAMIDVSDGVLGDLGHIREMSGVGARLELAK HHHCEEEECCCCCCCCHHHHHEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEE LPLSDEYRAACGDDPYALALSGGEDYELLFCIAPGKRGEVEALFAKLALRLSVIGEITAT CCCCCCHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECC PEVKLVTPGGGVYAPGHGGFDHFG CCEEEECCCCCEECCCCCCCCCCC >Mature Secondary Structure MRLAELGEFGLIDRIKKNVAASPSVLLGIGDDAAALVPAPECVTLITCDMLLESVHFDLS CCCHHCCCCCHHHHHHHHHCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHHHHCCCEE FCDPESLGRKSLSVNLSDLAAMGAHPRQFLLGIALGKEVPIEFMDRFMAGVLEQAERFGA ECCHHHHCCCEEEEEHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC TLVGGDTCASKGGIAISITALGEQRPELVLKRSGARPGDLICLSGTVGDAAAGLVALRQG EEECCCCCCCCCCEEEEEEECCCCCCHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHH VREGFLVSRQLDPTPRVAAGVALAEGGLATAMIDVSDGVLGDLGHIREMSGVGARLELAK HHHCEEEECCCCCCCCHHHHHEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEE LPLSDEYRAACGDDPYALALSGGEDYELLFCIAPGKRGEVEALFAKLALRLSVIGEITAT CCCCCCHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECC PEVKLVTPGGGVYAPGHGGFDHFG CCEEEECCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]