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The map label for this gene is gspK [H]

Identifier: 197116985

GI number: 197116985

Start: 707993

End: 708934

Strand: Reverse

Name: gspK [H]

Synonym: Gbem_0588

Alternate gene names: 197116985

Gene position: 708934-707993 (Counterclockwise)

Preceding gene: 308535175

Following gene: 197116984

Centisome position: 15.36

GC content: 60.51

Gene sequence:

>942_bases
ATGAGGGGGGAAAAGGGATTCGCCCTGGTGATAACCCTGATCGTCACGGCCCTGCTCGTGGCGCTCCTGGTGGAGTTCGT
GAACGAGGTCTACGTCGACACCTCGCATAGCCACAACTTCGTCGCCTCGCAGCAGGCGGGGATACTGGCGGAGTCGGGGG
TAGCCGGGGGGATCAAGCTGCTGCAGCTCTCCAGCGCGATGAGGCTGAACGAGCCGTACAGCTCCCTTCTGGAGCCGTGG
GCGAAGCCGCAGTCTTTCCAGGCGGATGACGGCACGGTGACCATCACCATCGAAGAGGAGACCGGGAAGCTCAACATCAA
CACGGCGACCTCGGCCAACGGCACTGCGGCCCCCTATTACACTCCGATGCTGCTCCGCCTCCTCACCAGGCTGAAGCTCA
GCACCGACCTCGCCGACTCGCTTATGGACTGGGTGGACGAAAACGATAATCCGCTCCCCGGAGGGGCCGAGAGCAACTAC
TACGGAACCCTGAAGCTCCCCTACGCAGCCAAGAACAAGAGACTGGAAACGGTGGACGAGCTCGCGCTGGTAAAGGGTTT
CACCCCGGAGACGCTGACGACCCTTAAATCGCTGGTGACCGTGTACGGCAACAGCAACGAGTTGGAGCCGGCCACTCTGA
TAAACGTCAATACGGCGCCCAAAGAGGTGCTGGCGGCTCTGGACGAAAGGATGAGCGACGACCTGGTGCAAAGGATCCTC
GACTTCCGCAAGACCAGGCCGATCAAGGGAATGGCGGATTTCAATTCGATACCCGGAATGGACTCGATGCTCCCCAAGTT
CTCGGACAAAATCACCTTCGGCGGCAGCGTGTACCGGATCCGCTCCGAAGGAAAAGTGGGCGAAAGCGTGGCCGTGGCCG
AGGCCGTGGTCCGCACCAGTGGTAGTGCGACACCAGCAGTTCTTTATTGGAGAGAGTATTGA

Upstream 100 bases:

>100_bases
ATACCGCCCTGAACGGGGGACTCCCCAAACAGGTGAGAATCACCCTCACGCTAAAGGGAGGCGAGGAGTTCAGCACCATC
GCCTCGCAGAGGCTCACGCG

Downstream 100 bases:

>100_bases
TGGATATGCTGATCGTGCAGCTTAAAAGGACCGAGCTGGTCCTGGCCTCCTTCAAGGCCCGCAAGGGGGGGGTGAACTTC
CTCTCCGCCGAGCGCCATGC

Product: type II secretion system protein GspK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MRGEKGFALVITLIVTALLVALLVEFVNEVYVDTSHSHNFVASQQAGILAESGVAGGIKLLQLSSAMRLNEPYSSLLEPW
AKPQSFQADDGTVTITIEEETGKLNINTATSANGTAAPYYTPMLLRLLTRLKLSTDLADSLMDWVDENDNPLPGGAESNY
YGTLKLPYAAKNKRLETVDELALVKGFTPETLTTLKSLVTVYGNSNELEPATLINVNTAPKEVLAALDERMSDDLVQRIL
DFRKTRPIKGMADFNSIPGMDSMLPKFSDKITFGGSVYRIRSEGKVGESVAVAEAVVRTSGSATPAVLYWREY

Sequences:

>Translated_313_residues
MRGEKGFALVITLIVTALLVALLVEFVNEVYVDTSHSHNFVASQQAGILAESGVAGGIKLLQLSSAMRLNEPYSSLLEPW
AKPQSFQADDGTVTITIEEETGKLNINTATSANGTAAPYYTPMLLRLLTRLKLSTDLADSLMDWVDENDNPLPGGAESNY
YGTLKLPYAAKNKRLETVDELALVKGFTPETLTTLKSLVTVYGNSNELEPATLINVNTAPKEVLAALDERMSDDLVQRIL
DFRKTRPIKGMADFNSIPGMDSMLPKFSDKITFGGSVYRIRSEGKVGESVAVAEAVVRTSGSATPAVLYWREY
>Mature_313_residues
MRGEKGFALVITLIVTALLVALLVEFVNEVYVDTSHSHNFVASQQAGILAESGVAGGIKLLQLSSAMRLNEPYSSLLEPW
AKPQSFQADDGTVTITIEEETGKLNINTATSANGTAAPYYTPMLLRLLTRLKLSTDLADSLMDWVDENDNPLPGGAESNY
YGTLKLPYAAKNKRLETVDELALVKGFTPETLTTLKSLVTVYGNSNELEPATLINVNTAPKEVLAALDERMSDDLVQRIL
DFRKTRPIKGMADFNSIPGMDSMLPKFSDKITFGGSVYRIRSEGKVGESVAVAEAVVRTSGSATPAVLYWREY

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG3156

COG function: function code U; Type II secretory pathway, component PulK

Gene ontology:

Cell location: Cell inner membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP K family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005628 [H]

Pfam domain/function: PF03934 GspK [H]

EC number: NA

Molecular weight: Translated: 34061; Mature: 34061

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGEKGFALVITLIVTALLVALLVEFVNEVYVDTSHSHNFVASQQAGILAESGVAGGIKL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEECCCCCCCHHH
LQLSSAMRLNEPYSSLLEPWAKPQSFQADDGTVTITIEEETGKLNINTATSANGTAAPYY
HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCHH
TPMLLRLLTRLKLSTDLADSLMDWVDENDNPLPGGAESNYYGTLKLPYAAKNKRLETVDE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHH
LALVKGFTPETLTTLKSLVTVYGNSNELEPATLINVNTAPKEVLAALDERMSDDLVQRIL
HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
DFRKTRPIKGMADFNSIPGMDSMLPKFSDKITFGGSVYRIRSEGKVGESVAVAEAVVRTS
HHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCEEEEEECCCCCCCHHHHHHHHHHCC
GSATPAVLYWREY
CCCCCEEEEEECC
>Mature Secondary Structure
MRGEKGFALVITLIVTALLVALLVEFVNEVYVDTSHSHNFVASQQAGILAESGVAGGIKL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEECCCCCCCHHH
LQLSSAMRLNEPYSSLLEPWAKPQSFQADDGTVTITIEEETGKLNINTATSANGTAAPYY
HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCHH
TPMLLRLLTRLKLSTDLADSLMDWVDENDNPLPGGAESNYYGTLKLPYAAKNKRLETVDE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHH
LALVKGFTPETLTTLKSLVTVYGNSNELEPATLINVNTAPKEVLAALDERMSDDLVQRIL
HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
DFRKTRPIKGMADFNSIPGMDSMLPKFSDKITFGGSVYRIRSEGKVGESVAVAEAVVRTS
HHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCEEEEEECCCCCCCHHHHHHHHHHCC
GSATPAVLYWREY
CCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]