| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is hppA [H]
Identifier: 197116963
GI number: 197116963
Start: 684661
End: 686703
Strand: Direct
Name: hppA [H]
Synonym: Gbem_0566
Alternate gene names: 197116963
Gene position: 684661-686703 (Clockwise)
Preceding gene: 197116957
Following gene: 197116968
Centisome position: 14.84
GC content: 63.09
Gene sequence:
>2043_bases ATGGAACAGTATGCAGTAGTCTTCGCCCTGGCTTGTGCCGCGGCGGCAGTGGCCTACGGTCTTATCTCGGCCCAGTGGAT CTTGGGGCTCCCCCAGGGTAACGAGCGGATGCGTCAGATCGCCGCAGCCATCCAGGAAGGGGCAGGGGCCTACATGAAGC GTCAGTACACCATCATCGCGGTGGTCGGCGTCGCCATGTTCGTCGCACTCTTCGCAACCCTCGGCTGGAAGACCGCGGTC GGCTTCCTGGTCGGCGCAGTCTTCTCCGGCCTCACCGGCTTCATCGGGATGTTCGTCTCGGTACGCGCCAACGTGAGGAC CACCGAGGCTGCCAAGTCCGGCATCCACAAGGCGCTCAACGTCGCTTTCAAGGGTGGTGCGATCACCGGTATGCTGGTTG TCGGTCTCGGTCTTCTGGGCGTTGCAGGCTACTACATGGTGCTCCAGCAGATCATGCCGGGCGCTCCGGTCAAAGAAATC GTCAGCCAGTTGGTCGGCCTCGGCTTCGGCGGCTCGCTGATCTCCATCTTCGCCCGTCTGGGCGGCGGTATCTTCACCAA GGGCGCTGACGTCGGCGCCGACCTCGTAGGCAAGGTCGAAGCCGGTATCCCCGAAGACGACCCCCGCAACCCGGCAGTCA TCGCCGACAACGTGGGCGACAACGTCGGCGACTGCGCCGGCATGGCCGCCGACCTCTTCGAGACCTACGCGGTAACCCTG ATCGCCGCCATGCTCCTTGGCGCCATCACCTTCACCAACTCGGCTGCAGTAAACTACCCGCTGATCCTGGGGGGCATCTC CATCATCGCCTCCATCATCGGCACCTACTTCGTCAAGCTCGGCGGCTCCGGCAAGATCATGGGCGCGCTCTACAAGGGGC TCATCGCTTCGGCCGTGATCGCCTGCATCGCCTTCTACTTCGTGACCGTGCAGATGTTCCCGCAGGGGCTGACCACCGCC ACCGGCGCCACCATCAGCGCCCTCAACATCTTCATCTCCGCCATCGTCGGCCTCGTGGTCACCGGTGCCATCTTCTGGAT CACCGAGTACTACACCGCCACCGAGTACGCTCCGGTCAAGCACATCGCCGAAGCCTCCAAGACCGGCCACGCCACCAACA TCATCGCCGGTCTCGGCGTTTCCATGAAGTCCACCGCCCTTCCGGTCATCGTCATCGCTGCCGGCATCGTGGTCGCCTCC AACTGCGCCGGGGTCTACGGCATCGCCATCGCGGCTGTGTCCATGCTCTCCCTGACCGGTATCGTCGTCGCCATGGACGC CTACGGCCCCATCACCGACAACGCCGGCGGCATCGCCGAGATGGCTGAACTGGACGATTCCGTCCGCGCCGTTACCGACC CGCTCGACGCGGTCGGCAACACCACCAAGGCCGTCACCAAAGGCTACGCCATCGGCTCCGCAGGCCTTGCCGCAATCATC CTGTTCACCTCCTATGTGCAGGAGCTGACCATCGCCGACAAGAGCTTCTCCCTCTCCGATCCGTACATCATCGTCGGCCT CTTCATCGGCGGCATGCTCCCCTACTACTTCGCGGCTATGTGCATGGAAGCTGTCGGTAAGGCAGGCGGCGCGGTCGTAG ACGAGGTTCGTCGCCAGTTCCGCACCATCAAGGGGATCATGGAAGGCACCGGCAAGCCGGACTATGCTGCCTGCGTCGAC ATCGTCACCAAGACCGCTCTTAAAGAGATGGTCATCCCGGGTCTCATCCCGATCCTCGCCCCGATCGTCGTAGGCTTCAC CCTCGGGCCCAAGGCTCTGGGCGGCGTCATCGTCGGTTCCATCGTCACCGGTATCTTCGTCGCTATCTCCATGACCACCG GCGGCGGCGCATGGGACAACGCCAAGAAGTACATCGAGGACGGCTATCACGGCGGCAAAGGTAGCGAAGCCCACAAGGCT GCAGTTACCGGCGACACCGTAGGCGACCCGTACAAGGACACCGCAGGCCCTGCGGTCAACCCGATGATCAAAATCATCAA CATCGTCTCGCTGCTCATCGTTCCGCTGCTGAACAAGATGTAG
Upstream 100 bases:
>100_bases TCTTTTCGATAACAATCACCCGTTTTTATGAAAGGATTTGTACTGCGCAAAGGGAAGTCACGCCTTTTCGAGGCATATCT AAATAGGAGGATTTTTTTCA
Downstream 100 bases:
>100_bases CAACAGGCTTTGGCTGAAACTAAAAAGGCGTCCCGGATTTCCGGGGCGCCTTTTTTCGTGGCTCGTAAGGGAATTGCGGG GGACTTCGAGTCCCCTCCCC
Product: membrane-bound proton-translocating pyrophosphatase
Products: NA
Alternate protein names: Membrane-bound proton-translocating pyrophosphatase; Pyrophosphate-energized inorganic pyrophosphatase; H(+)-PPase [H]
Number of amino acids: Translated: 680; Mature: 680
Protein sequence:
>680_residues MEQYAVVFALACAAAAVAYGLISAQWILGLPQGNERMRQIAAAIQEGAGAYMKRQYTIIAVVGVAMFVALFATLGWKTAV GFLVGAVFSGLTGFIGMFVSVRANVRTTEAAKSGIHKALNVAFKGGAITGMLVVGLGLLGVAGYYMVLQQIMPGAPVKEI VSQLVGLGFGGSLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTL IAAMLLGAITFTNSAAVNYPLILGGISIIASIIGTYFVKLGGSGKIMGALYKGLIASAVIACIAFYFVTVQMFPQGLTTA TGATISALNIFISAIVGLVVTGAIFWITEYYTATEYAPVKHIAEASKTGHATNIIAGLGVSMKSTALPVIVIAAGIVVAS NCAGVYGIAIAAVSMLSLTGIVVAMDAYGPITDNAGGIAEMAELDDSVRAVTDPLDAVGNTTKAVTKGYAIGSAGLAAII LFTSYVQELTIADKSFSLSDPYIIVGLFIGGMLPYYFAAMCMEAVGKAGGAVVDEVRRQFRTIKGIMEGTGKPDYAACVD IVTKTALKEMVIPGLIPILAPIVVGFTLGPKALGGVIVGSIVTGIFVAISMTTGGGAWDNAKKYIEDGYHGGKGSEAHKA AVTGDTVGDPYKDTAGPAVNPMIKIINIVSLLIVPLLNKM
Sequences:
>Translated_680_residues MEQYAVVFALACAAAAVAYGLISAQWILGLPQGNERMRQIAAAIQEGAGAYMKRQYTIIAVVGVAMFVALFATLGWKTAV GFLVGAVFSGLTGFIGMFVSVRANVRTTEAAKSGIHKALNVAFKGGAITGMLVVGLGLLGVAGYYMVLQQIMPGAPVKEI VSQLVGLGFGGSLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTL IAAMLLGAITFTNSAAVNYPLILGGISIIASIIGTYFVKLGGSGKIMGALYKGLIASAVIACIAFYFVTVQMFPQGLTTA TGATISALNIFISAIVGLVVTGAIFWITEYYTATEYAPVKHIAEASKTGHATNIIAGLGVSMKSTALPVIVIAAGIVVAS NCAGVYGIAIAAVSMLSLTGIVVAMDAYGPITDNAGGIAEMAELDDSVRAVTDPLDAVGNTTKAVTKGYAIGSAGLAAII LFTSYVQELTIADKSFSLSDPYIIVGLFIGGMLPYYFAAMCMEAVGKAGGAVVDEVRRQFRTIKGIMEGTGKPDYAACVD IVTKTALKEMVIPGLIPILAPIVVGFTLGPKALGGVIVGSIVTGIFVAISMTTGGGAWDNAKKYIEDGYHGGKGSEAHKA AVTGDTVGDPYKDTAGPAVNPMIKIINIVSLLIVPLLNKM >Mature_680_residues MEQYAVVFALACAAAAVAYGLISAQWILGLPQGNERMRQIAAAIQEGAGAYMKRQYTIIAVVGVAMFVALFATLGWKTAV GFLVGAVFSGLTGFIGMFVSVRANVRTTEAAKSGIHKALNVAFKGGAITGMLVVGLGLLGVAGYYMVLQQIMPGAPVKEI VSQLVGLGFGGSLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTL IAAMLLGAITFTNSAAVNYPLILGGISIIASIIGTYFVKLGGSGKIMGALYKGLIASAVIACIAFYFVTVQMFPQGLTTA TGATISALNIFISAIVGLVVTGAIFWITEYYTATEYAPVKHIAEASKTGHATNIIAGLGVSMKSTALPVIVIAAGIVVAS NCAGVYGIAIAAVSMLSLTGIVVAMDAYGPITDNAGGIAEMAELDDSVRAVTDPLDAVGNTTKAVTKGYAIGSAGLAAII LFTSYVQELTIADKSFSLSDPYIIVGLFIGGMLPYYFAAMCMEAVGKAGGAVVDEVRRQFRTIKGIMEGTGKPDYAACVD IVTKTALKEMVIPGLIPILAPIVVGFTLGPKALGGVIVGSIVTGIFVAISMTTGGGAWDNAKKYIEDGYHGGKGSEAHKA AVTGDTVGDPYKDTAGPAVNPMIKIINIVSLLIVPLLNKM
Specific function: Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force [H]
COG id: COG3808
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-insensitive subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004131 [H]
Pfam domain/function: PF03030 H_PPase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 69620; Mature: 69620
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQYAVVFALACAAAAVAYGLISAQWILGLPQGNERMRQIAAAIQEGAGAYMKRQYTIIA CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH VVGVAMFVALFATLGWKTAVGFLVGAVFSGLTGFIGMFVSVRANVRTTEAAKSGIHKALN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VAFKGGAITGMLVVGLGLLGVAGYYMVLQQIMPGAPVKEIVSQLVGLGFGGSLISIFARL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH GGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTL CCCEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH IAAMLLGAITFTNSAAVNYPLILGGISIIASIIGTYFVKLGGSGKIMGALYKGLIASAVI HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ACIAFYFVTVQMFPQGLTTATGATISALNIFISAIVGLVVTGAIFWITEYYTATEYAPVK HHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH HIAEASKTGHATNIIAGLGVSMKSTALPVIVIAAGIVVASNCAGVYGIAIAAVSMLSLTG HHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH IVVAMDAYGPITDNAGGIAEMAELDDSVRAVTDPLDAVGNTTKAVTKGYAIGSAGLAAII HHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHCCCCCHHHHHHHH LFTSYVQELTIADKSFSLSDPYIIVGLFIGGMLPYYFAAMCMEAVGKAGGAVVDEVRRQF HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH RTIKGIMEGTGKPDYAACVDIVTKTALKEMVIPGLIPILAPIVVGFTLGPKALGGVIVGS HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IVTGIFVAISMTTGGGAWDNAKKYIEDGYHGGKGSEAHKAAVTGDTVGDPYKDTAGPAVN HHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCHH PMIKIINIVSLLIVPLLNKM HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEQYAVVFALACAAAAVAYGLISAQWILGLPQGNERMRQIAAAIQEGAGAYMKRQYTIIA CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH VVGVAMFVALFATLGWKTAVGFLVGAVFSGLTGFIGMFVSVRANVRTTEAAKSGIHKALN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VAFKGGAITGMLVVGLGLLGVAGYYMVLQQIMPGAPVKEIVSQLVGLGFGGSLISIFARL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH GGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTL CCCEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH IAAMLLGAITFTNSAAVNYPLILGGISIIASIIGTYFVKLGGSGKIMGALYKGLIASAVI HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ACIAFYFVTVQMFPQGLTTATGATISALNIFISAIVGLVVTGAIFWITEYYTATEYAPVK HHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH HIAEASKTGHATNIIAGLGVSMKSTALPVIVIAAGIVVASNCAGVYGIAIAAVSMLSLTG HHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH IVVAMDAYGPITDNAGGIAEMAELDDSVRAVTDPLDAVGNTTKAVTKGYAIGSAGLAAII HHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHCCCCCHHHHHHHH LFTSYVQELTIADKSFSLSDPYIIVGLFIGGMLPYYFAAMCMEAVGKAGGAVVDEVRRQF HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH RTIKGIMEGTGKPDYAACVDIVTKTALKEMVIPGLIPILAPIVVGFTLGPKALGGVIVGS HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IVTGIFVAISMTTGGGAWDNAKKYIEDGYHGGKGSEAHKAAVTGDTVGDPYKDTAGPAVN HHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCHH PMIKIINIVSLLIVPLLNKM HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]