Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
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Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is mceE [H]
Identifier: 197116956
GI number: 197116956
Start: 671567
End: 671980
Strand: Reverse
Name: mceE [H]
Synonym: Gbem_0558
Alternate gene names: 197116956
Gene position: 671980-671567 (Counterclockwise)
Preceding gene: 197116958
Following gene: 197116955
Centisome position: 14.56
GC content: 57.0
Gene sequence:
>414_bases ATGTTATCTAAGATAAATCATGTCGGCGTTGCAGTCGCTTCTCTTGAGGAAGCACTTCCTTTTTATCGCGATTCACTGGG CATGACTTTCTCTGGTACAGAAGAGGTCCCAAGTCAACTAGTACGGGTAGCTTTTCTGTCAGTAGGCGAATCGAAGATCG AACTTCTGGAGCCGACCTCCCCCGAGAGTCCGGTGACCAAGTTCCTGGAGAAGAACGGCCCGGGGGTGCACCACGTGGCT TACGGGGTTGACGATATCGAGGCGGCTATCGCAGCGCTGGTGGCCAAAGGGACCCGCATGATCGACGCCGTACCCCGCAA CGGCGCCCACGGCGCGCGTATCGCCTTCATCCATCCCAAGAGCAGCGGCGGCGTGCTGACGGAACTGTGTGAAGTGCACG ACCACAGTCATTGA
Upstream 100 bases:
>100_bases ACAACTCTGACAAATTTTGCTCAGCTACTTGCAATTTGATTTTTTCCAGTTATTATCTACTTCCGTCAGTCTATGACCGA CGATCTGTAAAGGAATATTA
Downstream 100 bases:
>100_bases GACATTCAAATTTCGGAATCTAATGAGTCTGGATTTTTTTATTGACTTTTGTTTGAATAATAATATAGTGGCGTCAGTTT TCTATAACAGTGGTTTGCTC
Product: methylmalonyl-CoA epimerase
Products: glutathione; methylglyoxal
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MLSKINHVGVAVASLEEALPFYRDSLGMTFSGTEEVPSQLVRVAFLSVGESKIELLEPTSPESPVTKFLEKNGPGVHHVA YGVDDIEAAIAALVAKGTRMIDAVPRNGAHGARIAFIHPKSSGGVLTELCEVHDHSH
Sequences:
>Translated_137_residues MLSKINHVGVAVASLEEALPFYRDSLGMTFSGTEEVPSQLVRVAFLSVGESKIELLEPTSPESPVTKFLEKNGPGVHHVA YGVDDIEAAIAALVAKGTRMIDAVPRNGAHGARIAFIHPKSSGGVLTELCEVHDHSH >Mature_137_residues MLSKINHVGVAVASLEEALPFYRDSLGMTFSGTEEVPSQLVRVAFLSVGESKIELLEPTSPESPVTKFLEKNGPGVHHVA YGVDDIEAAIAALVAKGTRMIDAVPRNGAHGARIAFIHPKSSGGVLTELCEVHDHSH
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glyoxalase I family [H]
Homologues:
Organism=Homo sapiens, GI188035928, Length=129, Percent_Identity=42.6356589147287, Blast_Score=105, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17506387, Length=130, Percent_Identity=41.5384615384615, Blast_Score=99, Evalue=8e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 - InterPro: IPR018146 - InterPro: IPR017515 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: 4.4.1.5
Molecular weight: Translated: 14565; Mature: 14565
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKINHVGVAVASLEEALPFYRDSLGMTFSGTEEVPSQLVRVAFLSVGESKIELLEPTS CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCC PESPVTKFLEKNGPGVHHVAYGVDDIEAAIAALVAKGTRMIDAVPRNGAHGARIAFIHPK CCHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCHHEECCCCCCCCCCEEEEEECC SSGGVLTELCEVHDHSH CCCCHHHHHHHHHCCCC >Mature Secondary Structure MLSKINHVGVAVASLEEALPFYRDSLGMTFSGTEEVPSQLVRVAFLSVGESKIELLEPTS CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCC PESPVTKFLEKNGPGVHHVAYGVDDIEAAIAALVAKGTRMIDAVPRNGAHGARIAFIHPK CCHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCHHEECCCCCCCCCCEEEEEECC SSGGVLTELCEVHDHSH CCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: (R)-S-lactoylglutathione
Specific reaction: (R)-S-lactoylglutathione = glutathione + methylglyoxal
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]