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The map label for this gene is ompJ

Identifier: 197116955

GI number: 197116955

Start: 669861

End: 671219

Strand: Reverse

Name: ompJ

Synonym: Gbem_0557

Alternate gene names: NA

Gene position: 671219-669861 (Counterclockwise)

Preceding gene: 197116956

Following gene: 197116954

Centisome position: 14.54

GC content: 59.97

Gene sequence:

>1359_bases
ATGAGCTTTCAAAAGAAGATGCTTGCATTTGCGGCTGCCAGCGCTCTGACCGCAGCAACCGCAGTACCGGCAATGGCGCT
GGAAAACGAGTTTCACGGGATGTTCAAATTCATGGGCTATCAGTCCAACAGCCTCACCGGCGGCAACAGCGGGACCGTCA
ACTTCAACAGCGACGCCCACTCCGGTTTCTTCGCCGAGCAGCGCGCACGCCTTATGTACATCGCAAAGGCTAACGACAAC
CTCAAACTCGTAACCCACTTCGAGCTCGACACCCGCTTCGGCGGCGTGACCGGCGGCTACAAGGGCACCACCGGCAACGA
CTCCGGTAACCTCGACGCCGACCAGTTGACCCTCGAGACCAAGAACATTTACCTCGACTTCAACGAGCCGAACACCGCCA
CCAACTTCAAGGTTGGCATGCAGCCCTGGAACGACGCCTACGGCAGCCTCTTCCTCTCCGCCGACATGACCGGCGTGTAC
GCCACCAAGAAGTTCGATCCGGCAACCGTCTCCCTGGGCTGGTTCCGTTTCGACGACAACACGCTTGCCACCGGGACCAA
CACCGGCGCCGGCAAGCTCACCGCCGACCTCATCGTTTTGGACGGCAAGTTCGCCCTCAACAAGGACATGACCGTCGGGG
CGTCCTACTACAACATCCAGAACGACACCGGTGCAACCTTCAGCTCCGCAACCGTCGGCAACTACGAGCTGCTGCACATG
CTCGGCCTGAACGCAGACCTCAAGTTCGGCGATGTTGCAGTGAAGCCCTTCGCGGCATACCAGTTCGGCGACATCAACGG
CACCGACAGCATCTCCGGATACCTCTTGGGCGCGACCGGTAAAGCCAAGGTCGGCTCGGGCGCGATCAACTTCGCCGGCT
ACTACCTCTCCGGCGACAAGAAGACCACCGGCGACAGGGACTCCTTCCAGACCGTCACCGCAGGTACCACCTACTTCAAC
CCGGCCAACATGTGGCTCTTGGTACGCCCCAACCAGGCTACCAACACCTCCACTTCCGTCGTCAACAACGACATGACCGT
CGGCGGCCGCGGCTCCTACGGTGTCTTCGCCGGGTACGAAGGTACCGACAACAAACTCTTCTACAACGCCAACATCGGCT
ACATGGCCGCTGCAGAAAACCGCACAAACGCCGGCGTGAAAGAGAACGGCAGCCTCGGCACCGAGATCAACGCCCAGGTC
GGCTACAAGATCTACGACAACCTGAGCGCCAGCGTAGCAGCTGCTTACGTCTTCCTCGGCGACGGCCTCTCCGGCACGAC
CAAGAAGATCAACGGCTTCGGCGCTGCCAACGCCGACGACCCGTACCTTTTCAACGTACAGTTGAGCTACCTGTTTTAA

Upstream 100 bases:

>100_bases
TTTTTGCAATGTAATGACTGTTCGACCTGCTTTTTGCGGAAAACTGTACTAAAAGCAGTAACTTCAATCGAGTTTCAACA
ACCAACCCAGGAGGTAAACG

Downstream 100 bases:

>100_bases
TTGAGGCACAGCCTTCCGCACATAGCGGCAGGAAAAGCCTGACCCTGAAAAAGGCCGGAGAGACAACTCTCCGGCCTTTT
TTGCGTTCGCCGCACCGTTC

Product: porin OmpJ

Products: NA

Alternate protein names: Porin OmpJ; OmpJ-Like Porin

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MSFQKKMLAFAAASALTAATAVPAMALENEFHGMFKFMGYQSNSLTGGNSGTVNFNSDAHSGFFAEQRARLMYIAKANDN
LKLVTHFELDTRFGGVTGGYKGTTGNDSGNLDADQLTLETKNIYLDFNEPNTATNFKVGMQPWNDAYGSLFLSADMTGVY
ATKKFDPATVSLGWFRFDDNTLATGTNTGAGKLTADLIVLDGKFALNKDMTVGASYYNIQNDTGATFSSATVGNYELLHM
LGLNADLKFGDVAVKPFAAYQFGDINGTDSISGYLLGATGKAKVGSGAINFAGYYLSGDKKTTGDRDSFQTVTAGTTYFN
PANMWLLVRPNQATNTSTSVVNNDMTVGGRGSYGVFAGYEGTDNKLFYNANIGYMAAAENRTNAGVKENGSLGTEINAQV
GYKIYDNLSASVAAAYVFLGDGLSGTTKKINGFGAANADDPYLFNVQLSYLF

Sequences:

>Translated_452_residues
MSFQKKMLAFAAASALTAATAVPAMALENEFHGMFKFMGYQSNSLTGGNSGTVNFNSDAHSGFFAEQRARLMYIAKANDN
LKLVTHFELDTRFGGVTGGYKGTTGNDSGNLDADQLTLETKNIYLDFNEPNTATNFKVGMQPWNDAYGSLFLSADMTGVY
ATKKFDPATVSLGWFRFDDNTLATGTNTGAGKLTADLIVLDGKFALNKDMTVGASYYNIQNDTGATFSSATVGNYELLHM
LGLNADLKFGDVAVKPFAAYQFGDINGTDSISGYLLGATGKAKVGSGAINFAGYYLSGDKKTTGDRDSFQTVTAGTTYFN
PANMWLLVRPNQATNTSTSVVNNDMTVGGRGSYGVFAGYEGTDNKLFYNANIGYMAAAENRTNAGVKENGSLGTEINAQV
GYKIYDNLSASVAAAYVFLGDGLSGTTKKINGFGAANADDPYLFNVQLSYLF
>Mature_451_residues
SFQKKMLAFAAASALTAATAVPAMALENEFHGMFKFMGYQSNSLTGGNSGTVNFNSDAHSGFFAEQRARLMYIAKANDNL
KLVTHFELDTRFGGVTGGYKGTTGNDSGNLDADQLTLETKNIYLDFNEPNTATNFKVGMQPWNDAYGSLFLSADMTGVYA
TKKFDPATVSLGWFRFDDNTLATGTNTGAGKLTADLIVLDGKFALNKDMTVGASYYNIQNDTGATFSSATVGNYELLHML
GLNADLKFGDVAVKPFAAYQFGDINGTDSISGYLLGATGKAKVGSGAINFAGYYLSGDKKTTGDRDSFQTVTAGTTYFNP
ANMWLLVRPNQATNTSTSVVNNDMTVGGRGSYGVFAGYEGTDNKLFYNANIGYMAAAENRTNAGVKENGSLGTEINAQVG
YKIYDNLSASVAAAYVFLGDGLSGTTKKINGFGAANADDPYLFNVQLSYLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48146; Mature: 48015

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFQKKMLAFAAASALTAATAVPAMALENEFHGMFKFMGYQSNSLTGGNSGTVNFNSDAH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCEEEECCCCC
SGFFAEQRARLMYIAKANDNLKLVTHFELDTRFGGVTGGYKGTTGNDSGNLDADQLTLET
CCEECCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHEEEEE
KNIYLDFNEPNTATNFKVGMQPWNDAYGSLFLSADMTGVYATKKFDPATVSLGWFRFDDN
EEEEEEECCCCCCCEEEECCCCCCCCCCEEEEEECCCEEEEECCCCCCEEEEEEEEECCC
TLATGTNTGAGKLTADLIVLDGKFALNKDMTVGASYYNIQNDTGATFSSATVGNYELLHM
EEECCCCCCCCEEEEEEEEEECCEEECCCCEECEEEEEEECCCCCEEECEECCCEEEEEE
LGLNADLKFGDVAVKPFAAYQFGDINGTDSISGYLLGATGKAKVGSGAINFAGYYLSGDK
ECCCCCCEECCEEECCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEECCC
KTTGDRDSFQTVTAGTTYFNPANMWLLVRPNQATNTSTSVVNNDMTVGGRGSYGVFAGYE
CCCCCCCCCEEEECCCEEECCCCEEEEECCCCCCCCCCEEECCCEEECCCCCCCEEECCC
GTDNKLFYNANIGYMAAAENRTNAGVKENGSLGTEINAQVGYKIYDNLSASVAAAYVFLG
CCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEEECEEEECCCCCCCEEEEEEEE
DGLSGTTKKINGFGAANADDPYLFNVQLSYLF
CCCCCCCEEECCCCCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure 
SFQKKMLAFAAASALTAATAVPAMALENEFHGMFKFMGYQSNSLTGGNSGTVNFNSDAH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCEEEECCCCC
SGFFAEQRARLMYIAKANDNLKLVTHFELDTRFGGVTGGYKGTTGNDSGNLDADQLTLET
CCEECCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHEEEEE
KNIYLDFNEPNTATNFKVGMQPWNDAYGSLFLSADMTGVYATKKFDPATVSLGWFRFDDN
EEEEEEECCCCCCCEEEECCCCCCCCCCEEEEEECCCEEEEECCCCCCEEEEEEEEECCC
TLATGTNTGAGKLTADLIVLDGKFALNKDMTVGASYYNIQNDTGATFSSATVGNYELLHM
EEECCCCCCCCEEEEEEEEEECCEEECCCCEECEEEEEEECCCCCEEECEECCCEEEEEE
LGLNADLKFGDVAVKPFAAYQFGDINGTDSISGYLLGATGKAKVGSGAINFAGYYLSGDK
ECCCCCCEECCEEECCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEECCC
KTTGDRDSFQTVTAGTTYFNPANMWLLVRPNQATNTSTSVVNNDMTVGGRGSYGVFAGYE
CCCCCCCCCEEEECCCEEECCCCEEEEECCCCCCCCCCEEECCCEEECCCCCCCEEECCC
GTDNKLFYNANIGYMAAAENRTNAGVKENGSLGTEINAQVGYKIYDNLSASVAAAYVFLG
CCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEEECEEEECCCCCCCEEEEEEEE
DGLSGTTKKINGFGAANADDPYLFNVQLSYLF
CCCCCCCEEECCCCCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA