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The map label for this gene is 197116946

Identifier: 197116946

GI number: 197116946

Start: 660264

End: 661937

Strand: Direct

Name: 197116946

Synonym: Gbem_0548

Alternate gene names: NA

Gene position: 660264-661937 (Clockwise)

Preceding gene: 197116928

Following gene: 308535172

Centisome position: 14.31

GC content: 64.52

Gene sequence:

>1674_bases
ATGTCACGCAAAAGCATTGAAAAAAGACGCGCCCTTCTCGCCGGCGAGAGCGGCGGCGAGCACAGAAACAGCGGCGGCAG
GCTTTCCTGCTGCCTGGTCTACCCCAACCGCTACCACTCCGCCATGAGCAACCTGGGCTTCCAGGCCGTCCAGGCCATGA
TGAACGCGCACCCGGAGGTGATCTGCGAGCGCGCCTTCCTGCCGGAGCGCGACGAGCTGGCGGAACTGGAGCGGACCGAG
GGGACGCTTCTCTCGCTGGAGGGGCAGCGCCCGCTCTCCTCGTTCGACCTCGTCGCCTTCTCCGTTTCCTTTGAAAGCGA
TTACCTGAACCTCCCCACCATCTTCCGGCTCTCGGGGATGAGCCCCTGGGCCGCCGAGCGTTCGGCGCTGCAACCGCTCG
TTTTGGCTGGTGGGGCGGCGCTCTTTCTGAACCCCGAGCCGGTCGCCCCGTTCCTCGACCTGGTCTGCATCGGCGAAGCG
GAACCGATCCTCCCGGATCTGCTGGAACTGCTGAAGGACGGCCGCCGCTCCCGCGCCGAACTCTTGTTGCAGGCCTGCCG
TCTCCCCGGCGTCTACGTCCCGTCGCTGTACCAGCCGCAGTATGACGCCGGCCGCTTCAGAGGGGTGCAGCCGCTTCCTG
GGGCGCCGGCCAGGGTGCGCCGCGTTTGGGAAAAGGAGCTCGATCGCAGGCAGACGGTGACCGAGATCCACACCGACGCC
ACCGAGTTCTCCGGAATGCATCTGGTCGAACTTTCCCGTGGCTGCCCTCGTGCCTGCCGCTTCTGCGCAGCCGGCTTCAT
CTACCTCCCCTACCGCAGCCGTTCGCTGGAAGGAGTAAGGGAGGAGGTGCTCAAAGGGGTGGCGCAGGGAAGAAAGGTGG
GACTGGTCGCGGCCGCCGTCTCGGACTACACCGGCATCGGGGAATTGTGCGGAGAGATCGTCGCGGCCGGCGGGAAGTTC
TCGGTCTCCTCCTTCCGCATCGACCACCTCGACGCCGGGATGATCGAGGCGCTCAAGGCCAGTGGGCAAAAGAGCGTGGC
ACTGGCGCCGGAGGGGGGAAGCCAAAGGCTGCGCGACCTGGTGAAAAAGGGGATCGACGAGGAGCAGATCCTGGCGGCTT
GCGACAAGCTGATCAGCCACGACATCCTAAACCTGAAGCTCTATTTCATCATAGGCCTCCCCACCGAGACGGAAAAGGAC
CTGGAGGAACTGGTCCTGTTGGTGACCCGGATCAGGGAGCGGGTGCTGGCGGCGGCCAAAAAGAACAAGCGCCTGGGGGA
GCTGCAGCTCTCGGTGAACCCGTTCATTCCCAAGCCTTTCACCCCCTTCCAGTGGTGCGGCATGGAGCCGGTCAAGTCGC
TGGAATCGAAGTGGAAGTACCTGCAGAAGGCGCTGGGGAAGCTGTCCAACCTGAAGCTGCAAATGGAGAGCCCGCGGGAG
GCATACCAGCAGGCGCTTTTGTCGCGGGGGGACCGCAGGCTTGCGCAACTGCTGGTCCTCGCGGACCGGACCGGGAGCTG
GAAACAGGCGCTGCGTGAGGCCGGTTTAGATGCCGACGCCGAGGTTCACCGTCAAGTGGGGCTGGACGAGCCGCTGCCGT
GGGATTTTATAGATGGCGGCGACTGCGAGAGGCTTAAGCGGGAATACCGCAGGGCTTTCGAGGAAGGGAATTAA

Upstream 100 bases:

>100_bases
AGTGTACATTTAGGGTTCGGTGTGTCAAGCGGGGGCGGGAGTGCGGCAATGCGAGCTTTTTTACTTTCATAGCGCTTCCC
AAAGATGATACTTTGGCGCA

Downstream 100 bases:

>100_bases
GGAGCGAGAGTGGAGGATTTGCGGCGGCAGGGGAGTTGACCCTGCCGCCTTTTTTCGTCTGCGTGCTAGTTGAAGAAGAA
CCTGGCGCCGACCGTGACTG

Product: radical SAM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MSRKSIEKRRALLAGESGGEHRNSGGRLSCCLVYPNRYHSAMSNLGFQAVQAMMNAHPEVICERAFLPERDELAELERTE
GTLLSLEGQRPLSSFDLVAFSVSFESDYLNLPTIFRLSGMSPWAAERSALQPLVLAGGAALFLNPEPVAPFLDLVCIGEA
EPILPDLLELLKDGRRSRAELLLQACRLPGVYVPSLYQPQYDAGRFRGVQPLPGAPARVRRVWEKELDRRQTVTEIHTDA
TEFSGMHLVELSRGCPRACRFCAAGFIYLPYRSRSLEGVREEVLKGVAQGRKVGLVAAAVSDYTGIGELCGEIVAAGGKF
SVSSFRIDHLDAGMIEALKASGQKSVALAPEGGSQRLRDLVKKGIDEEQILAACDKLISHDILNLKLYFIIGLPTETEKD
LEELVLLVTRIRERVLAAAKKNKRLGELQLSVNPFIPKPFTPFQWCGMEPVKSLESKWKYLQKALGKLSNLKLQMESPRE
AYQQALLSRGDRRLAQLLVLADRTGSWKQALREAGLDADAEVHRQVGLDEPLPWDFIDGGDCERLKREYRRAFEEGN

Sequences:

>Translated_557_residues
MSRKSIEKRRALLAGESGGEHRNSGGRLSCCLVYPNRYHSAMSNLGFQAVQAMMNAHPEVICERAFLPERDELAELERTE
GTLLSLEGQRPLSSFDLVAFSVSFESDYLNLPTIFRLSGMSPWAAERSALQPLVLAGGAALFLNPEPVAPFLDLVCIGEA
EPILPDLLELLKDGRRSRAELLLQACRLPGVYVPSLYQPQYDAGRFRGVQPLPGAPARVRRVWEKELDRRQTVTEIHTDA
TEFSGMHLVELSRGCPRACRFCAAGFIYLPYRSRSLEGVREEVLKGVAQGRKVGLVAAAVSDYTGIGELCGEIVAAGGKF
SVSSFRIDHLDAGMIEALKASGQKSVALAPEGGSQRLRDLVKKGIDEEQILAACDKLISHDILNLKLYFIIGLPTETEKD
LEELVLLVTRIRERVLAAAKKNKRLGELQLSVNPFIPKPFTPFQWCGMEPVKSLESKWKYLQKALGKLSNLKLQMESPRE
AYQQALLSRGDRRLAQLLVLADRTGSWKQALREAGLDADAEVHRQVGLDEPLPWDFIDGGDCERLKREYRRAFEEGN
>Mature_556_residues
SRKSIEKRRALLAGESGGEHRNSGGRLSCCLVYPNRYHSAMSNLGFQAVQAMMNAHPEVICERAFLPERDELAELERTEG
TLLSLEGQRPLSSFDLVAFSVSFESDYLNLPTIFRLSGMSPWAAERSALQPLVLAGGAALFLNPEPVAPFLDLVCIGEAE
PILPDLLELLKDGRRSRAELLLQACRLPGVYVPSLYQPQYDAGRFRGVQPLPGAPARVRRVWEKELDRRQTVTEIHTDAT
EFSGMHLVELSRGCPRACRFCAAGFIYLPYRSRSLEGVREEVLKGVAQGRKVGLVAAAVSDYTGIGELCGEIVAAGGKFS
VSSFRIDHLDAGMIEALKASGQKSVALAPEGGSQRLRDLVKKGIDEEQILAACDKLISHDILNLKLYFIIGLPTETEKDL
EELVLLVTRIRERVLAAAKKNKRLGELQLSVNPFIPKPFTPFQWCGMEPVKSLESKWKYLQKALGKLSNLKLQMESPREA
YQQALLSRGDRRLAQLLVLADRTGSWKQALREAGLDADAEVHRQVGLDEPLPWDFIDGGDCERLKREYRRAFEEGN

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 61898; Mature: 61767

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKSIEKRRALLAGESGGEHRNSGGRLSCCLVYPNRYHSAMSNLGFQAVQAMMNAHPEV
CCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHCCCHHH
ICERAFLPERDELAELERTEGTLLSLEGQRPLSSFDLVAFSVSFESDYLNLPTIFRLSGM
HHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCC
SPWAAERSALQPLVLAGGAALFLNPEPVAPFLDLVCIGEAEPILPDLLELLKDGRRSRAE
CCCHHHHHHCCCCEEECCEEEEECCCCCCHHHHEEECCCCCCCHHHHHHHHHCCCHHHHH
LLLQACRLPGVYVPSLYQPQYDAGRFRGVQPLPGAPARVRRVWEKELDRRQTVTEIHTDA
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
TEFSGMHLVELSRGCPRACRFCAAGFIYLPYRSRSLEGVREEVLKGVAQGRKVGLVAAAV
HHHCCEEEEHHHCCCHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEHHHH
SDYTGIGELCGEIVAAGGKFSVSSFRIDHLDAGMIEALKASGQKSVALAPEGGSQRLRDL
HHCCCHHHHHHHHHHCCCCEEECEEEECCCCHHHHHHHHCCCCCCEEECCCCCHHHHHHH
VKKGIDEEQILAACDKLISHDILNLKLYFIIGLPTETEKDLEELVLLVTRIRERVLAAAK
HHHCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
KNKRLGELQLSVNPFIPKPFTPFQWCGMEPVKSLESKWKYLQKALGKLSNLKLQMESPRE
HCCCCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHH
AYQQALLSRGDRRLAQLLVLADRTGSWKQALREAGLDADAEVHRQVGLDEPLPWDFIDGG
HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCC
DCERLKREYRRAFEEGN
CHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRKSIEKRRALLAGESGGEHRNSGGRLSCCLVYPNRYHSAMSNLGFQAVQAMMNAHPEV
CCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHCCCHHH
ICERAFLPERDELAELERTEGTLLSLEGQRPLSSFDLVAFSVSFESDYLNLPTIFRLSGM
HHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCC
SPWAAERSALQPLVLAGGAALFLNPEPVAPFLDLVCIGEAEPILPDLLELLKDGRRSRAE
CCCHHHHHHCCCCEEECCEEEEECCCCCCHHHHEEECCCCCCCHHHHHHHHHCCCHHHHH
LLLQACRLPGVYVPSLYQPQYDAGRFRGVQPLPGAPARVRRVWEKELDRRQTVTEIHTDA
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
TEFSGMHLVELSRGCPRACRFCAAGFIYLPYRSRSLEGVREEVLKGVAQGRKVGLVAAAV
HHHCCEEEEHHHCCCHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEHHHH
SDYTGIGELCGEIVAAGGKFSVSSFRIDHLDAGMIEALKASGQKSVALAPEGGSQRLRDL
HHCCCHHHHHHHHHHCCCCEEECEEEECCCCHHHHHHHHCCCCCCEEECCCCCHHHHHHH
VKKGIDEEQILAACDKLISHDILNLKLYFIIGLPTETEKDLEELVLLVTRIRERVLAAAK
HHHCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
KNKRLGELQLSVNPFIPKPFTPFQWCGMEPVKSLESKWKYLQKALGKLSNLKLQMESPRE
HCCCCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHH
AYQQALLSRGDRRLAQLLVLADRTGSWKQALREAGLDADAEVHRQVGLDEPLPWDFIDGG
HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCC
DCERLKREYRRAFEEGN
CHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]