| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116944
Identifier: 197116944
GI number: 197116944
Start: 659034
End: 659684
Strand: Reverse
Name: 197116944
Synonym: Gbem_0546
Alternate gene names: NA
Gene position: 659684-659034 (Counterclockwise)
Preceding gene: 197116945
Following gene: 197116943
Centisome position: 14.29
GC content: 60.37
Gene sequence:
>651_bases ATGCTACAGTACTGCAAAATGCGCCTGGTCCAGGTGTTGGAGACGGTAAAACACGGCAGCATAAACAGCCTGCTTAGGGA GACCGTCTACCTGAACCGCGAGGCCGTGCCGGTGGAGATAGAGCTCGACAACCTGAGGCCGGTGGCGGATTTCGCCCGCC CCCATGACGAGGAGGTAGTCGAGCTGACACAGGAACTGCTGCAGAACCGGCAACTCGCCTATCCGCTCAAGAGCAGGCAC CTGAAGACGCTCAACTACCTGAAGCGCGGTTACCGCGGGTATGCCCTCGTCAAGGGAAACAAGGTGTTCGGGGATATCTG GTGCGCCGACTCCAAGGCCGGCAACGACTGCTACAAGCACCCCGACGAGTTGTGGCTGGGGGTTAGGTGCGCCCCCAAGG AGGTCTACACCTTCGATATGTTTGTCGATCCGGCCAACCGCGGCGGAAACCTCGCCGCAGCACTGCAAAACGGCGCACTC CACCTTTTGAAGCGGCATGGGTACACCAAGGCATACGGTTTTTTCTGGTCCGACAACGTCCCGGCGCTGTGGGTGCACCG GACCCTGCGCTGGCGGGAATTGAACCGCGTGAGAGCTACCCGGCTGCTTTTATCCAGGAAACTGTACGTGACCGGCGACC CGGCAGACTGA
Upstream 100 bases:
>100_bases AGATCGTTCCGGAGAACTTCGAAACCATCGGATCTGTGGTCAACTTCATCAATTACAAGCTGACTGCCAAGGGGTGAGGT GGCCAAAGGAGTGGGAGGCG
Downstream 100 bases:
>100_bases AGGCCCACGGCACGAAAGGAGTCACGATGAACAGCAAAGACATCCCCATGGTTCCCAACAGGAAGGCCTCGCTCCCTACC GTGTACGGCGACACTCCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MLQYCKMRLVQVLETVKHGSINSLLRETVYLNREAVPVEIELDNLRPVADFARPHDEEVVELTQELLQNRQLAYPLKSRH LKTLNYLKRGYRGYALVKGNKVFGDIWCADSKAGNDCYKHPDELWLGVRCAPKEVYTFDMFVDPANRGGNLAAALQNGAL HLLKRHGYTKAYGFFWSDNVPALWVHRTLRWRELNRVRATRLLLSRKLYVTGDPAD
Sequences:
>Translated_216_residues MLQYCKMRLVQVLETVKHGSINSLLRETVYLNREAVPVEIELDNLRPVADFARPHDEEVVELTQELLQNRQLAYPLKSRH LKTLNYLKRGYRGYALVKGNKVFGDIWCADSKAGNDCYKHPDELWLGVRCAPKEVYTFDMFVDPANRGGNLAAALQNGAL HLLKRHGYTKAYGFFWSDNVPALWVHRTLRWRELNRVRATRLLLSRKLYVTGDPAD >Mature_216_residues MLQYCKMRLVQVLETVKHGSINSLLRETVYLNREAVPVEIELDNLRPVADFARPHDEEVVELTQELLQNRQLAYPLKSRH LKTLNYLKRGYRGYALVKGNKVFGDIWCADSKAGNDCYKHPDELWLGVRCAPKEVYTFDMFVDPANRGGNLAAALQNGAL HLLKRHGYTKAYGFFWSDNVPALWVHRTLRWRELNRVRATRLLLSRKLYVTGDPAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24984; Mature: 24984
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQYCKMRLVQVLETVKHGSINSLLRETVYLNREAVPVEIELDNLRPVADFARPHDEEVV CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCCCHHHHH ELTQELLQNRQLAYPLKSRHLKTLNYLKRGYRGYALVKGNKVFGDIWCADSKAGNDCYKH HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCEEEEEEEECCCCCCCHHHCC PDELWLGVRCAPKEVYTFDMFVDPANRGGNLAAALQNGALHLLKRHGYTKAYGFFWSDNV CCHHEEEEEECCCCEEEEEEEECCCCCCCCEEEHHHCCHHHHHHHCCCCEEEEEEECCCC PALWVHRTLRWRELNRVRATRLLLSRKLYVTGDPAD CEEEHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCC >Mature Secondary Structure MLQYCKMRLVQVLETVKHGSINSLLRETVYLNREAVPVEIELDNLRPVADFARPHDEEVV CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCCCHHHHH ELTQELLQNRQLAYPLKSRHLKTLNYLKRGYRGYALVKGNKVFGDIWCADSKAGNDCYKH HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCEEEEEEEECCCCCCCHHHCC PDELWLGVRCAPKEVYTFDMFVDPANRGGNLAAALQNGALHLLKRHGYTKAYGFFWSDNV CCHHEEEEEECCCCEEEEEEEECCCCCCCCEEEHHHCCHHHHHHHCCCCEEEEEEECCCC PALWVHRTLRWRELNRVRATRLLLSRKLYVTGDPAD CEEEHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA