| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116907
Identifier: 197116907
GI number: 197116907
Start: 617353
End: 617715
Strand: Direct
Name: 197116907
Synonym: Gbem_0509
Alternate gene names: NA
Gene position: 617353-617715 (Clockwise)
Preceding gene: 197116906
Following gene: 308535169
Centisome position: 13.38
GC content: 52.07
Gene sequence:
>363_bases ATGATAGCCATAACCTACAATGACCGATTCTTTAAGGCGGTAAGCAATTCTGAAAATGGCGAGGTGGATGAGAGCACCAT CTTCCATTACCGGCAGACGGATGACCTCGTGTGGGGCACCTACCAAGGAGGACAAGTCCGGTTCGGTACGCTCGTCGCCA AGGTTCTTCCAGATGCGTCTCTGGAAATGAGATACAGCCATGTGAACCTCAACGGCGAGATGATGACAGGGGAGTGCCGC TCGACGCCGGAATTGTTGAAGGATGGACGCATCAAACTGAACGAGAAATGGCAGTGGACCTGCGGCGATTGCTCTGAAGG TGAATCTGCCGTGGAAGAATTACTCTCAGGCGATTTAAGCTAG
Upstream 100 bases:
>100_bases TGGCGTCAAGCCGGAGCTCAAGTTAAGACGGGCTCCGAGATTTAATCCGACGTCCAGCCCGAGCGGTGTTATTCCCTGGT TGCACTATTAAAGAGGCGAA
Downstream 100 bases:
>100_bases CAGCCTGCTCGCCCACCGCCCACTTCTGCTCCGGCATCCGCTTTTAAAAGAGTGCAAACACTTCAGGGGCATACTCTCGT GCCCTTTTCAACGACCCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MIAITYNDRFFKAVSNSENGEVDESTIFHYRQTDDLVWGTYQGGQVRFGTLVAKVLPDASLEMRYSHVNLNGEMMTGECR STPELLKDGRIKLNEKWQWTCGDCSEGESAVEELLSGDLS
Sequences:
>Translated_120_residues MIAITYNDRFFKAVSNSENGEVDESTIFHYRQTDDLVWGTYQGGQVRFGTLVAKVLPDASLEMRYSHVNLNGEMMTGECR STPELLKDGRIKLNEKWQWTCGDCSEGESAVEELLSGDLS >Mature_120_residues MIAITYNDRFFKAVSNSENGEVDESTIFHYRQTDDLVWGTYQGGQVRFGTLVAKVLPDASLEMRYSHVNLNGEMMTGECR STPELLKDGRIKLNEKWQWTCGDCSEGESAVEELLSGDLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13519; Mature: 13519
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAITYNDRFFKAVSNSENGEVDESTIFHYRQTDDLVWGTYQGGQVRFGTLVAKVLPDAS CEEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEHHHHHHHHCCCCC LEMRYSHVNLNGEMMTGECRSTPELLKDGRIKLNEKWQWTCGDCSEGESAVEELLSGDLS CEEEEEEECCCCEEEECCCCCCHHHHCCCCEEECCEEEEECCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MIAITYNDRFFKAVSNSENGEVDESTIFHYRQTDDLVWGTYQGGQVRFGTLVAKVLPDAS CEEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEHHHHHHHHCCCCC LEMRYSHVNLNGEMMTGECRSTPELLKDGRIKLNEKWQWTCGDCSEGESAVEELLSGDLS CEEEEEEECCCCEEEECCCCCCHHHHCCCCEEECCEEEEECCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA