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The map label for this gene is yfgC [C]

Identifier: 197116846

GI number: 197116846

Start: 539714

End: 540592

Strand: Direct

Name: yfgC [C]

Synonym: Gbem_0448

Alternate gene names: 197116846

Gene position: 539714-540592 (Clockwise)

Preceding gene: 197116845

Following gene: 197116847

Centisome position: 11.69

GC content: 62.34

Gene sequence:

>879_bases
ATGAAATCGTTTACCATGACGCTGTTTTTGGCACTCGCCTGCCTCTGCTCCACCGAGGCGCACGCCGGCTGGCAGGACAA
GCTGCAAAACCTGATGAACCCGGAATCCAAGGAAGGGAAGATCCTCTCCGGCGCGACCCAGGTCGTATCCTCCTCGCAGG
AGATGACTTATGCCACTGAGCGGACCGTGGGGCAGAGCCTGGCGCTTGAGAGCATGCAACGCTTCGGCAAGCCGGTGTCG
AACGAGGCGCTGCAAAAGTACGTGAACCTGGTAGGAAACGCCGTGGCCAGGAACAGCCGGCGCTCCACCATCCCTTACCA
GTTCGTGGTGCTGGACAGCCCGGTGCGCAACGCCTTCGCCGCCCCAGGCGGGATGGTCTTCATCAGCCGCGGGCTTTTGG
ACGTGGTCGAGAACGAGGCGGAACTGGCGGCTGTGCTGGCGCACGAGGTAGGCCACGTGGCCGAAAAGCATGCCTTGAAG
AGCATCCGGCGCGCGCAGTTCCTCCAGGGGGTGGGGACCATCTCCGCCGCTACCATGAAGGGGAGCGAGGGGAAGAAGTT
CGAATCCATGATCGGCGACCTGCAGTCGACCCTTTTCGACAAGGGGCTGGACCAGGGGATGGAGTACGAGGCGGACCTGG
CCGCCTTGGAGACCACCTACCGCACCGGGTACGACCCGGCCGCCATGATCAGCGTGCTCCAGAAGCTGAAAAAGCTGGAG
GCGAGCGATTCCGGGAAGGGGTCGTGGTTCTCGACGCATCCCCCGCTGGACGAGCGCATCGCGCGCCTTTCTTCCAGCCT
GGAGAAGTACCCGGACCATGCCTCACTGGCAAAAGTATCGGCCAGATTCGCGAAGACTGTCAAAACGGCCAAGAAGTAA

Upstream 100 bases:

>100_bases
ACTGGACAAGATCCTTTCCCGCAAGGTGAGCGACAAGGAAGTCAGGACCTTCTTAAAGGAAGGCAAAATCGGCGAGTACG
CCCAATAAAAGGAGGATGCG

Downstream 100 bases:

>100_bases
AAGTAATGACTCTGTTTCATTCGTGTTAAATGTGGTTAATGGCACTATGTTTATAGTTTGACAAAGAAAGGGCGAACTAG
AGTTCGCCCTTTTTCTATAT

Product: peptidase lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKSFTMTLFLALACLCSTEAHAGWQDKLQNLMNPESKEGKILSGATQVVSSSQEMTYATERTVGQSLALESMQRFGKPVS
NEALQKYVNLVGNAVARNSRRSTIPYQFVVLDSPVRNAFAAPGGMVFISRGLLDVVENEAELAAVLAHEVGHVAEKHALK
SIRRAQFLQGVGTISAATMKGSEGKKFESMIGDLQSTLFDKGLDQGMEYEADLAALETTYRTGYDPAAMISVLQKLKKLE
ASDSGKGSWFSTHPPLDERIARLSSSLEKYPDHASLAKVSARFAKTVKTAKK

Sequences:

>Translated_292_residues
MKSFTMTLFLALACLCSTEAHAGWQDKLQNLMNPESKEGKILSGATQVVSSSQEMTYATERTVGQSLALESMQRFGKPVS
NEALQKYVNLVGNAVARNSRRSTIPYQFVVLDSPVRNAFAAPGGMVFISRGLLDVVENEAELAAVLAHEVGHVAEKHALK
SIRRAQFLQGVGTISAATMKGSEGKKFESMIGDLQSTLFDKGLDQGMEYEADLAALETTYRTGYDPAAMISVLQKLKKLE
ASDSGKGSWFSTHPPLDERIARLSSSLEKYPDHASLAKVSARFAKTVKTAKK
>Mature_292_residues
MKSFTMTLFLALACLCSTEAHAGWQDKLQNLMNPESKEGKILSGATQVVSSSQEMTYATERTVGQSLALESMQRFGKPVS
NEALQKYVNLVGNAVARNSRRSTIPYQFVVLDSPVRNAFAAPGGMVFISRGLLDVVENEAELAAVLAHEVGHVAEKHALK
SIRRAQFLQGVGTISAATMKGSEGKKFESMIGDLQSTLFDKGLDQGMEYEADLAALETTYRTGYDPAAMISVLQKLKKLE
ASDSGKGSWFSTHPPLDERIARLSSSLEKYPDHASLAKVSARFAKTVKTAKK

Specific function: Unknown

COG id: COG4784

COG function: function code R; Putative Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=200, Percent_Identity=29.5, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI87082185, Length=181, Percent_Identity=32.0441988950276, Blast_Score=75, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6322940, Length=182, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 31729; Mature: 31729

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFTMTLFLALACLCSTEAHAGWQDKLQNLMNPESKEGKILSGATQVVSSSQEMTYATE
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHH
RTVGQSLALESMQRFGKPVSNEALQKYVNLVGNAVARNSRRSTIPYQFVVLDSPVRNAFA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHC
APGGMVFISRGLLDVVENEAELAAVLAHEVGHVAEKHALKSIRRAQFLQGVGTISAATMK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSEGKKFESMIGDLQSTLFDKGLDQGMEYEADLAALETTYRTGYDPAAMISVLQKLKKLE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
ASDSGKGSWFSTHPPLDERIARLSSSLEKYPDHASLAKVSARFAKTVKTAKK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSFTMTLFLALACLCSTEAHAGWQDKLQNLMNPESKEGKILSGATQVVSSSQEMTYATE
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHH
RTVGQSLALESMQRFGKPVSNEALQKYVNLVGNAVARNSRRSTIPYQFVVLDSPVRNAFA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHC
APGGMVFISRGLLDVVENEAELAAVLAHEVGHVAEKHALKSIRRAQFLQGVGTISAATMK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSEGKKFESMIGDLQSTLFDKGLDQGMEYEADLAALETTYRTGYDPAAMISVLQKLKKLE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
ASDSGKGSWFSTHPPLDERIARLSSSLEKYPDHASLAKVSARFAKTVKTAKK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]