| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is proW [C]
Identifier: 197116829
GI number: 197116829
Start: 509468
End: 511204
Strand: Reverse
Name: proW [C]
Synonym: Gbem_0431
Alternate gene names: 197116829
Gene position: 511204-509468 (Counterclockwise)
Preceding gene: 197116830
Following gene: 197116828
Centisome position: 11.08
GC content: 62.41
Gene sequence:
>1737_bases ATGGCCAACCGGTCGACACCGTTCAGTAAAACAACAGGAAGAGCCGCTCCCAACTTTTGGGACCTGGCCGCCTTTCTCAT GGTCATGGGGCTCGTCACGCTCTTTGCCTGGGGCAGCCGCGAGATGGGGATACCCTATATGCCGGGTGAGCAGATCCCCC TTTCGCTCGACCCCGTTAACCTCCCCGAGTACGCGCTGCGCACCGTCTTGCGCATGGCGGCGGCACTGGCGTTTTCGCTC CTTTTCACCTTCAGCTACGGAACGCTCGCGGCGAAGAGCCGCCGCGCCGAGCGGATACTCGTTCCGCTTTTGAACATACT CCAGTCGGTCCCCATCCTCGGCTTTCTCTCGGTCACCGTCACCGGCTTCATCGCCATGTTCCCTGGAAAACTTCTCGGGG TGGAGTGCGCCGCCATCTTCGCCATCTTCACCTCCCAGGCCTGGAACATGGCCTTCAGCTTTTACCAGTCGCTAAAGACC ATCCCCTCCGACCTGAGCGAGGCCTCGGTCCTCTTCGGGCTCTCTCCCTGGCAGCGCTTCTGGAAGCTGGATGCCCCCTT CGCCATGCCCCCCTTGATCTGGAACATGATGATGTCGGTCTCGGGGGGATGGTTCTTCGTGGTGGCGTCGGAGGCGATCA CGGTGGGGAAGACTTCGGTAACCCTCCCCGGGATAGGCTCCTACGTGGCGCAGGCCATCCACTACCGCAGCCTCTCCGCC ATCGGCTGGGCGCTTTTGACCATGCTGCTGGTGATCCTCGTCTACGACCAGCTGCTCTTTCGCCCCATGGTGGCCTGGGC CGACAAGTTCAAGTTCGAAACGACCGAAAGCGGCGAGGGAAGCGGCTCCTGGGTGCTGACCCTGTTCCAGCGCGCGAGGC TCCTGCGCGCCGCCGGACGTTTCCTGGTCAACCGGTGGATCCGGCTCACCGACCTGCTCCCCAGGAGAAAGCAGCGCGCG AGCTTCCGTGACGCAACGCAGGCCACGATCCCCAAGGCGCAGGAAATTGCCTGGAACGCGCTTCTAGCCATTGGCGTCGC CGGGGGCGCGTGGCTTTTGGTCCAGTTCGTCGGGGGAGAGGTAGACGGCGCCGAAATTTGGAAGGTCTTCTATCTCGGCT TCCTGACCCTGGTTCGGGTCACGGTGCTTTTGATCATCGCCAGCCTGATCTGGGTACCCATCGGGGTGTATATCGGGCTC AACCCGAAATGGGCGACGAGAGTCCAGCCCCTGGCGCAGTTTCTGGCCGCGTTCCCCGCGAACCTTTTCTTCCCGGTGGC GGTCTTCTTCATGGTCCACTACCACCTCTCACCGGAGATCTGGACCGCCCCGCTGATGATCCTGGGGACTCAGTGGTACA TCCTTTTCAACGTGATCGGCGGCGCCTCGGCCATCCCTACCGACCTGCGCGAGGCGGCCCGCAACTTCGGCGTCTCCGGG TGGAAGCTTTGGAAAACGCTGCTTCTCCCCGGCATTTTCCCATCGCTTGTCACCGGGCTCGTCACCGCTGCAGGGGGGAC CTGGAACGCCAGCATCGTCGCCGAGATCGTCACCTGGGGGAATACGACCCTTACCGCAACCGGTCTCGGGTCGTACATCG CCATCTGGACCGAGAAAGGGGATTACCCCCGCATCGCCCTGGGCATAGCAGTCATGAGTATTTACGTCTTGGTACTGAAC CGGTTTTTCTGGGAGCGGCTGTTCACCGTCAGCCAGACCCGCTACCGGCTCGGCTAG
Upstream 100 bases:
>100_bases GTCCGCGCGTGCTCCGGCATGAGGCCAGGACGACCCGCGTCCGGATAGCTGCGCCTTTACGCAAAAGGGGTAGAGTATCC GGCAGCACGGAGGAAGCAGG
Downstream 100 bases:
>100_bases AGGAGAAGAAGGATGGAAGCGACAGACAATAAAGTTCCGCTGCTCAAGCTGAGCAACATAAGAAAGTCGTACAAGAAGTC CGACTCGGGCGAGCACCTGG
Product: ABC transporter membrane protein
Products: ADP; phosphate; L-proline [Cytoplasm] [C]
Alternate protein names: ABC Transporter Permease; ABC Transporter Membrane Protein; ABC Transporter Nitrate Permease; ABC Transporter; ABC Anion Transporter; ABC-Type Anion Transport System Permease Component; Anion Transporter Permease Protein; Nitrate ABC Transporter Permease; ABC Transporter Inner Membrane Subunit; ABC Transporter Transmembrane Permease Protein; ABC-Type Anion Transport System; ABC-Type Nitrate Transport Permease; ABC Transport System Permease Protein; Transmembrane ABC Transporter Protein; Nitrate Transport System Permease Protein; Nitrate ABC Transporter Permease Protein; Anion ABC Transporter Permease; Taurine ABC Transporter Permease Protein; Sugar ABC Transporter; Sugar ABC Transporter 1 Permease Protein; Sulfonate Transport Permease Protein; Nitrate Transport System Permease
Number of amino acids: Translated: 578; Mature: 577
Protein sequence:
>578_residues MANRSTPFSKTTGRAAPNFWDLAAFLMVMGLVTLFAWGSREMGIPYMPGEQIPLSLDPVNLPEYALRTVLRMAAALAFSL LFTFSYGTLAAKSRRAERILVPLLNILQSVPILGFLSVTVTGFIAMFPGKLLGVECAAIFAIFTSQAWNMAFSFYQSLKT IPSDLSEASVLFGLSPWQRFWKLDAPFAMPPLIWNMMMSVSGGWFFVVASEAITVGKTSVTLPGIGSYVAQAIHYRSLSA IGWALLTMLLVILVYDQLLFRPMVAWADKFKFETTESGEGSGSWVLTLFQRARLLRAAGRFLVNRWIRLTDLLPRRKQRA SFRDATQATIPKAQEIAWNALLAIGVAGGAWLLVQFVGGEVDGAEIWKVFYLGFLTLVRVTVLLIIASLIWVPIGVYIGL NPKWATRVQPLAQFLAAFPANLFFPVAVFFMVHYHLSPEIWTAPLMILGTQWYILFNVIGGASAIPTDLREAARNFGVSG WKLWKTLLLPGIFPSLVTGLVTAAGGTWNASIVAEIVTWGNTTLTATGLGSYIAIWTEKGDYPRIALGIAVMSIYVLVLN RFFWERLFTVSQTRYRLG
Sequences:
>Translated_578_residues MANRSTPFSKTTGRAAPNFWDLAAFLMVMGLVTLFAWGSREMGIPYMPGEQIPLSLDPVNLPEYALRTVLRMAAALAFSL LFTFSYGTLAAKSRRAERILVPLLNILQSVPILGFLSVTVTGFIAMFPGKLLGVECAAIFAIFTSQAWNMAFSFYQSLKT IPSDLSEASVLFGLSPWQRFWKLDAPFAMPPLIWNMMMSVSGGWFFVVASEAITVGKTSVTLPGIGSYVAQAIHYRSLSA IGWALLTMLLVILVYDQLLFRPMVAWADKFKFETTESGEGSGSWVLTLFQRARLLRAAGRFLVNRWIRLTDLLPRRKQRA SFRDATQATIPKAQEIAWNALLAIGVAGGAWLLVQFVGGEVDGAEIWKVFYLGFLTLVRVTVLLIIASLIWVPIGVYIGL NPKWATRVQPLAQFLAAFPANLFFPVAVFFMVHYHLSPEIWTAPLMILGTQWYILFNVIGGASAIPTDLREAARNFGVSG WKLWKTLLLPGIFPSLVTGLVTAAGGTWNASIVAEIVTWGNTTLTATGLGSYIAIWTEKGDYPRIALGIAVMSIYVLVLN RFFWERLFTVSQTRYRLG >Mature_577_residues ANRSTPFSKTTGRAAPNFWDLAAFLMVMGLVTLFAWGSREMGIPYMPGEQIPLSLDPVNLPEYALRTVLRMAAALAFSLL FTFSYGTLAAKSRRAERILVPLLNILQSVPILGFLSVTVTGFIAMFPGKLLGVECAAIFAIFTSQAWNMAFSFYQSLKTI PSDLSEASVLFGLSPWQRFWKLDAPFAMPPLIWNMMMSVSGGWFFVVASEAITVGKTSVTLPGIGSYVAQAIHYRSLSAI GWALLTMLLVILVYDQLLFRPMVAWADKFKFETTESGEGSGSWVLTLFQRARLLRAAGRFLVNRWIRLTDLLPRRKQRAS FRDATQATIPKAQEIAWNALLAIGVAGGAWLLVQFVGGEVDGAEIWKVFYLGFLTLVRVTVLLIIASLIWVPIGVYIGLN PKWATRVQPLAQFLAAFPANLFFPVAVFFMVHYHLSPEIWTAPLMILGTQWYILFNVIGGASAIPTDLREAARNFGVSGW KLWKTLLLPGIFPSLVTGLVTAAGGTWNASIVAEIVTWGNTTLTATGLGSYIAIWTEKGDYPRIALGIAVMSIYVLVLNR FFWERLFTVSQTRYRLG
Specific function: Involved In A Multicomponent Binding-Protein-Dependent Transport System For Glycine Betaine/L-Proline. [C]
COG id: COG4986
COG function: function code P; ABC-type anion transport system, duplicated permease component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63996; Mature: 63865
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANRSTPFSKTTGRAAPNFWDLAAFLMVMGLVTLFAWGSREMGIPYMPGEQIPLSLDPVN CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC LPEYALRTVLRMAAALAFSLLFTFSYGTLAAKSRRAERILVPLLNILQSVPILGFLSVTV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH TGFIAMFPGKLLGVECAAIFAIFTSQAWNMAFSFYQSLKTIPSDLSEASVLFGLSPWQRF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHH WKLDAPFAMPPLIWNMMMSVSGGWFFVVASEAITVGKTSVTLPGIGSYVAQAIHYRSLSA HCCCCCCCCHHHHHHHHHHCCCCEEEEEECCEEEECCCEEECCCHHHHHHHHHHHHHHHH IGWALLTMLLVILVYDQLLFRPMVAWADKFKFETTESGEGSGSWVLTLFQRARLLRAAGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH FLVNRWIRLTDLLPRRKQRASFRDATQATIPKAQEIAWNALLAIGVAGGAWLLVQFVGGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCC VDGAEIWKVFYLGFLTLVRVTVLLIIASLIWVPIGVYIGLNPKWATRVQPLAQFLAAFPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCH NLFFPVAVFFMVHYHLSPEIWTAPLMILGTQWYILFNVIGGASAIPTDLREAARNFGVSG HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCH WKLWKTLLLPGIFPSLVTGLVTAAGGTWNASIVAEIVTWGNTTLTATGLGSYIAIWTEKG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEECCC DYPRIALGIAVMSIYVLVLNRFFWERLFTVSQTRYRLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANRSTPFSKTTGRAAPNFWDLAAFLMVMGLVTLFAWGSREMGIPYMPGEQIPLSLDPVN CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC LPEYALRTVLRMAAALAFSLLFTFSYGTLAAKSRRAERILVPLLNILQSVPILGFLSVTV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH TGFIAMFPGKLLGVECAAIFAIFTSQAWNMAFSFYQSLKTIPSDLSEASVLFGLSPWQRF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHH WKLDAPFAMPPLIWNMMMSVSGGWFFVVASEAITVGKTSVTLPGIGSYVAQAIHYRSLSA HCCCCCCCCHHHHHHHHHHCCCCEEEEEECCEEEECCCEEECCCHHHHHHHHHHHHHHHH IGWALLTMLLVILVYDQLLFRPMVAWADKFKFETTESGEGSGSWVLTLFQRARLLRAAGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH FLVNRWIRLTDLLPRRKQRASFRDATQATIPKAQEIAWNALLAIGVAGGAWLLVQFVGGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCC VDGAEIWKVFYLGFLTLVRVTVLLIIASLIWVPIGVYIGLNPKWATRVQPLAQFLAAFPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCH NLFFPVAVFFMVHYHLSPEIWTAPLMILGTQWYILFNVIGGASAIPTDLREAARNFGVSG HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCH WKLWKTLLLPGIFPSLVTGLVTAAGGTWNASIVAEIVTWGNTTLTATGLGSYIAIWTEKG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEECCC DYPRIALGIAVMSIYVLVLNRFFWERLFTVSQTRYRLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-proline [Periplasm]; H2O [C]
Specific reaction: ATP + L-proline [Periplasm] + H2O = ADP + phosphate + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA