| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116809
Identifier: 197116809
GI number: 197116809
Start: 488107
End: 488439
Strand: Reverse
Name: 197116809
Synonym: Gbem_0411
Alternate gene names: NA
Gene position: 488439-488107 (Counterclockwise)
Preceding gene: 197116812
Following gene: 197116802
Centisome position: 10.58
GC content: 57.96
Gene sequence:
>333_bases ATGGCTGAGAAAAAAGGGGTGGCTCTTGGAGAGAAGCTGAATCTGGTGAACCTGGCTGGCTATCAGGATGGCGCGGTGGT GAGCAGGACGGTCATAGACAAGCCGGTGGGAACTATCACTGCGTTCGCCTTTGACGCGGGAGAGGGGCTGAGTGAGCATA CCGCCCCCTATGACGCGTTCGTGCAGGTGCTGGATGGGGAGGCGGAGATCAATATAGACGGGACCGCTCACAATGTCGCG GCGGGGGAGATCATCATCATGCCGGCGAATAAGCCGCATTCGCTTAGGGCGGTGAAGCCGTTCAAGATGCTGCTGGTGAT GATCAGGGCTTAA
Upstream 100 bases:
>100_bases GCAGAATTTTACCATTAGATTGACCTGCATCAATTGCATCACTGTCTGATCGGGTTACAGTTCCTATCAAGAACGAAACC TATGTGAGAGGAGAATGGAT
Downstream 100 bases:
>100_bases AGCACTCACCACAGCGGAACACAGAGGAACCACAGAGGGAAACAACTTCTAAAAGCTCTAAACAGGGATGAAAGGGATAC AGGGGATAACTGCATAAAAC
Product: cupin superfamily barrel domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin Region; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain Protein; Cupin 2 Barrel; 5-Nucleotidase SurE; Cupin Domain-Containing Protein; Cytoplasmic Protein; Cupin Domain Containing Protein; Cupin Superfamily Barrel Domain-Containing Protein; Cupin 2 Conserved Barrel; Cupin 2 Conserved Barrel Protein
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MAEKKGVALGEKLNLVNLAGYQDGAVVSRTVIDKPVGTITAFAFDAGEGLSEHTAPYDAFVQVLDGEAEINIDGTAHNVA AGEIIIMPANKPHSLRAVKPFKMLLVMIRA
Sequences:
>Translated_110_residues MAEKKGVALGEKLNLVNLAGYQDGAVVSRTVIDKPVGTITAFAFDAGEGLSEHTAPYDAFVQVLDGEAEINIDGTAHNVA AGEIIIMPANKPHSLRAVKPFKMLLVMIRA >Mature_109_residues AEKKGVALGEKLNLVNLAGYQDGAVVSRTVIDKPVGTITAFAFDAGEGLSEHTAPYDAFVQVLDGEAEINIDGTAHNVAA GEIIIMPANKPHSLRAVKPFKMLLVMIRA
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11631; Mature: 11499
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKKGVALGEKLNLVNLAGYQDGAVVSRTVIDKPVGTITAFAFDAGEGLSEHTAPYDAF CCCCCCCCCCCCCCEEEECCCCCCCEEEEEHHCCCCCEEEEEEEECCCCCCCCCCCHHHH VQVLDGEAEINIDGTAHNVAAGEIIIMPANKPHSLRAVKPFKMLLVMIRA HEEECCCEEEEECCCCCCCCCCEEEEEECCCCCCCEEECHHHHHHEEECC >Mature Secondary Structure AEKKGVALGEKLNLVNLAGYQDGAVVSRTVIDKPVGTITAFAFDAGEGLSEHTAPYDAF CCCCCCCCCCCCCEEEECCCCCCCEEEEEHHCCCCCEEEEEEEECCCCCCCCCCCHHHH VQVLDGEAEINIDGTAHNVAAGEIIIMPANKPHSLRAVKPFKMLLVMIRA HEEECCCEEEEECCCCCCCCCCEEEEEECCCCCCCEEECHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA