| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116767
Identifier: 197116767
GI number: 197116767
Start: 444924
End: 445781
Strand: Reverse
Name: 197116767
Synonym: Gbem_0367
Alternate gene names: NA
Gene position: 445781-444924 (Counterclockwise)
Preceding gene: 197116768
Following gene: 197116763
Centisome position: 9.66
GC content: 61.19
Gene sequence:
>858_bases ATGCACAGCAGACCCTTTGTCGAGGTAGTAAAGGAGCAGCTAGAATCAGAATCGCTCAACCTGCCGGTGTTCCACCCCAT CGCCCTAAAGTTGCAGGGGATCCTGGCGGCCACGGACTTCAGCATCGATCAGGTGGTGGCGCTGATCATCAAGGACCAGG CGCTCACCAGCCAGATCCTGAGGCTCGCCAACTCCGCCTTTTTCAGCGGTCTCGCCAAGGTCACCACCATCACCGACGCG GTAATACGGCTGGGGGCGCGGGAGATCGCCAGCGTCGCCATGCTCGCCTCACAGCAAAGCAGCTACAACAGCTTCACCAT GCCCGAGTTGAAGAGCCACTCCCAGCTTTTGTGGAAGCACGCCATCGGCTGCGCCATCGGGACCAGGTGGCTGTGCGAGA AAAGCGGCTATAAGCAGCTAGCGCAAGAGGGGTTCATCGCCGGGCTCCTGCACGACATCGGCTGCCTGTTGATTCTCAGG GTGCTGGAGGGGATCATGCTCGCGGACAGCGGGCAGAAAGGGGTGTCACGGGAGTTGACCAACGAGATCATGACTGCGAT GCACGCCGAAACGGGGTACCAGCTGATGCAGAAGTGGAACCTCCCGGAGATTTACTGCACCATCGTCAGGGACCACCACA AGGAGCAAAGCGACACGAGCGACGTGCTCCTCACCCTGGTGCGCTTGGTGGATCACGCCTGCCGCAAACTCGGGCTCGGC TCGCCGCCGGAGCCGAACCTGATGCTCGCCGCAACCTTCGAGGCCCAGGGGATGGGCATCAAGGAGATCATGCTGGCCGA GCTGGAAATCACCATCGAGGACGCCATGGAGATGGTCACCGTCACCTCTGCCGCCTGA
Upstream 100 bases:
>100_bases GCCGCGGGGCTGGTGTCGCTGCACGACACGGTGCGGCTCCTCCCCAGGATCGGCAAACCGCGCCCGATTTCCGAGATCAG GCGCCTTTTGGGGGATTGAC
Downstream 100 bases:
>100_bases GGAATTCCATGAACCCCTGGTCGAAGACCCGCTGCACCTCCCACTTCTCGCCCCGCTGTTTCGCCACCAGAATGGCCCGC GCCTGGCAGCCGAGGAATCC
Product: metal-dependent phosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MHSRPFVEVVKEQLESESLNLPVFHPIALKLQGILAATDFSIDQVVALIIKDQALTSQILRLANSAFFSGLAKVTTITDA VIRLGAREIASVAMLASQQSSYNSFTMPELKSHSQLLWKHAIGCAIGTRWLCEKSGYKQLAQEGFIAGLLHDIGCLLILR VLEGIMLADSGQKGVSRELTNEIMTAMHAETGYQLMQKWNLPEIYCTIVRDHHKEQSDTSDVLLTLVRLVDHACRKLGLG SPPEPNLMLAATFEAQGMGIKEIMLAELEITIEDAMEMVTVTSAA
Sequences:
>Translated_285_residues MHSRPFVEVVKEQLESESLNLPVFHPIALKLQGILAATDFSIDQVVALIIKDQALTSQILRLANSAFFSGLAKVTTITDA VIRLGAREIASVAMLASQQSSYNSFTMPELKSHSQLLWKHAIGCAIGTRWLCEKSGYKQLAQEGFIAGLLHDIGCLLILR VLEGIMLADSGQKGVSRELTNEIMTAMHAETGYQLMQKWNLPEIYCTIVRDHHKEQSDTSDVLLTLVRLVDHACRKLGLG SPPEPNLMLAATFEAQGMGIKEIMLAELEITIEDAMEMVTVTSAA >Mature_285_residues MHSRPFVEVVKEQLESESLNLPVFHPIALKLQGILAATDFSIDQVVALIIKDQALTSQILRLANSAFFSGLAKVTTITDA VIRLGAREIASVAMLASQQSSYNSFTMPELKSHSQLLWKHAIGCAIGTRWLCEKSGYKQLAQEGFIAGLLHDIGCLLILR VLEGIMLADSGQKGVSRELTNEIMTAMHAETGYQLMQKWNLPEIYCTIVRDHHKEQSDTSDVLLTLVRLVDHACRKLGLG SPPEPNLMLAATFEAQGMGIKEIMLAELEITIEDAMEMVTVTSAA
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR013976 [H]
Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]
EC number: NA
Molecular weight: Translated: 31303; Mature: 31303
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSRPFVEVVKEQLESESLNLPVFHPIALKLQGILAATDFSIDQVVALIIKDQALTSQIL CCCCHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RLANSAFFSGLAKVTTITDAVIRLGAREIASVAMLASQQSSYNSFTMPELKSHSQLLWKH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH AIGCAIGTRWLCEKSGYKQLAQEGFIAGLLHDIGCLLILRVLEGIMLADSGQKGVSRELT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH NEIMTAMHAETGYQLMQKWNLPEIYCTIVRDHHKEQSDTSDVLLTLVRLVDHACRKLGLG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC SPPEPNLMLAATFEAQGMGIKEIMLAELEITIEDAMEMVTVTSAA CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHSRPFVEVVKEQLESESLNLPVFHPIALKLQGILAATDFSIDQVVALIIKDQALTSQIL CCCCHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RLANSAFFSGLAKVTTITDAVIRLGAREIASVAMLASQQSSYNSFTMPELKSHSQLLWKH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH AIGCAIGTRWLCEKSGYKQLAQEGFIAGLLHDIGCLLILRVLEGIMLADSGQKGVSRELT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH NEIMTAMHAETGYQLMQKWNLPEIYCTIVRDHHKEQSDTSDVLLTLVRLVDHACRKLGLG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC SPPEPNLMLAATFEAQGMGIKEIMLAELEITIEDAMEMVTVTSAA CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]