| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116766
Identifier: 197116766
GI number: 197116766
Start: 443951
End: 444940
Strand: Direct
Name: 197116766
Synonym: Gbem_0366
Alternate gene names: NA
Gene position: 443951-444940 (Clockwise)
Preceding gene: 197116765
Following gene: 197116769
Centisome position: 9.62
GC content: 66.06
Gene sequence:
>990_bases ATGACCGAGCAGTTGGAGCAGTACCAAGCGCATTTCCAGGAAGGTGGACGGGTCAGGGTAGGGGTGCCGCTGAAGGGGGG AGGCGCCTTCTCCGAATGGGGAACAGTGGCTTCGCTGGACGACGACCTCCTCCAGCTCTACCTCTCAAGGGACTCGCTTC CCGAGCAGGCGCGCCTGGAACTGGGGCGGACCCTGGATCTGGCGCTCGACGGAAAGCAGGGGCCGCTCGCCTGCCGCGGC GTGCTGGTCGCCGACCATGCAGCGGACCACCGCCTGGTGCTGCGGCTGGTGGAGGACGTGGTCCCGTATGAGCCGAGGGA ATACTTCCGTCAGGACGTCTACCTTCCCCTGATCTATCGGCGCACCTTGAGCCAGGTTGCCGAGGAGGTCCGGCTGCGCT GGGAGCACTCGCGCCGGGAGATCGAGCTGGCCGCGCAAGACCCGGATCCGGACGAGCCTGAGGAAGTGGCGGACGCAAGG GAGGAGATCAGGGCGAGGCTGGAAAAGCGCAAGACGGCGCCCCCTTTGGCCGCCAACCTAAGCGGCGGGGGGGCGAGGCT CAACATCGCCGAGCGTTTTGCCGAGGGGGAGTTGGTGGAGTTGAGCATCTACCTGCCACAGCACTCCAGGATGATAGAAA TCATCGGCGAGGTGGTCCAGGTGACGGCGCTTCCGGACCGGGTGCGTTTTAGCACGGCGCTCAGGTACCGCTTCATCGAC GAGGCCGACCGGGACCGGCTGATCGGCTACATTTCGGCCGAGCAGTTGCACCAGATGTCGCAACATGGGCCGCGGGTGCT GCTCCCCCCGCCGGAGGAGCCTTCAGTTTGGCGCCGCCGCCTGCAGGTGACCTTCGTTCTTGCGCTTCTGGCGGGATTCC TCGGCTGCCAGGCGCGGGCCATTCTGGTGGCGAAACAGCGGGGCGAGAAGTGGGAGGTGCAGCGGGTCTTCGACCAGGGG TTCATGGAATTCCTCAGGCGGCAGAGGTGA
Upstream 100 bases:
>100_bases TTTCGGGCTTAACTGGAGCGAGGCGCACTAGATCAGGGAGCGGGGTGGCCAGCGATTAGACTGGTCAGGTTGATATTAAA GGCTTTCCGGAGAGGCGATT
Downstream 100 bases:
>100_bases CGGTGACCATCTCCATGGCGTCCTCGATGGTGATTTCCAGCTCGGCCAGCATGATCTCCTTGATGCCCATCCCCTGGGCC TCGAAGGTTGCGGCGAGCAT
Product: PilZ domain-containing protein
Products: NA
Alternate protein names: PilZ Domain-Containing Protein
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTEQLEQYQAHFQEGGRVRVGVPLKGGGAFSEWGTVASLDDDLLQLYLSRDSLPEQARLELGRTLDLALDGKQGPLACRG VLVADHAADHRLVLRLVEDVVPYEPREYFRQDVYLPLIYRRTLSQVAEEVRLRWEHSRREIELAAQDPDPDEPEEVADAR EEIRARLEKRKTAPPLAANLSGGGARLNIAERFAEGELVELSIYLPQHSRMIEIIGEVVQVTALPDRVRFSTALRYRFID EADRDRLIGYISAEQLHQMSQHGPRVLLPPPEEPSVWRRRLQVTFVLALLAGFLGCQARAILVAKQRGEKWEVQRVFDQG FMEFLRRQR
Sequences:
>Translated_329_residues MTEQLEQYQAHFQEGGRVRVGVPLKGGGAFSEWGTVASLDDDLLQLYLSRDSLPEQARLELGRTLDLALDGKQGPLACRG VLVADHAADHRLVLRLVEDVVPYEPREYFRQDVYLPLIYRRTLSQVAEEVRLRWEHSRREIELAAQDPDPDEPEEVADAR EEIRARLEKRKTAPPLAANLSGGGARLNIAERFAEGELVELSIYLPQHSRMIEIIGEVVQVTALPDRVRFSTALRYRFID EADRDRLIGYISAEQLHQMSQHGPRVLLPPPEEPSVWRRRLQVTFVLALLAGFLGCQARAILVAKQRGEKWEVQRVFDQG FMEFLRRQR >Mature_328_residues TEQLEQYQAHFQEGGRVRVGVPLKGGGAFSEWGTVASLDDDLLQLYLSRDSLPEQARLELGRTLDLALDGKQGPLACRGV LVADHAADHRLVLRLVEDVVPYEPREYFRQDVYLPLIYRRTLSQVAEEVRLRWEHSRREIELAAQDPDPDEPEEVADARE EIRARLEKRKTAPPLAANLSGGGARLNIAERFAEGELVELSIYLPQHSRMIEIIGEVVQVTALPDRVRFSTALRYRFIDE ADRDRLIGYISAEQLHQMSQHGPRVLLPPPEEPSVWRRRLQVTFVLALLAGFLGCQARAILVAKQRGEKWEVQRVFDQGF MEFLRRQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37646; Mature: 37515
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQLEQYQAHFQEGGRVRVGVPLKGGGAFSEWGTVASLDDDLLQLYLSRDSLPEQARLE CCHHHHHHHHHHHCCCEEEEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHH LGRTLDLALDGKQGPLACRGVLVADHAADHRLVLRLVEDVVPYEPREYFRQDVYLPLIYR HCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHH RTLSQVAEEVRLRWEHSRREIELAAQDPDPDEPEEVADAREEIRARLEKRKTAPPLAANL HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECC SGGGARLNIAERFAEGELVELSIYLPQHSRMIEIIGEVVQVTALPDRVRFSTALRYRFID CCCCEEEHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC EADRDRLIGYISAEQLHQMSQHGPRVLLPPPEEPSVWRRRLQVTFVLALLAGFLGCQARA CCCCCCEEEEECHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHE ILVAKQRGEKWEVQRVFDQGFMEFLRRQR EEEEHHCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TEQLEQYQAHFQEGGRVRVGVPLKGGGAFSEWGTVASLDDDLLQLYLSRDSLPEQARLE CHHHHHHHHHHHCCCEEEEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHH LGRTLDLALDGKQGPLACRGVLVADHAADHRLVLRLVEDVVPYEPREYFRQDVYLPLIYR HCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHH RTLSQVAEEVRLRWEHSRREIELAAQDPDPDEPEEVADAREEIRARLEKRKTAPPLAANL HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECC SGGGARLNIAERFAEGELVELSIYLPQHSRMIEIIGEVVQVTALPDRVRFSTALRYRFID CCCCEEEHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC EADRDRLIGYISAEQLHQMSQHGPRVLLPPPEEPSVWRRRLQVTFVLALLAGFLGCQARA CCCCCCEEEEECHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHE ILVAKQRGEKWEVQRVFDQGFMEFLRRQR EEEEHHCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA