| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116761
Identifier: 197116761
GI number: 197116761
Start: 439309
End: 440115
Strand: Direct
Name: 197116761
Synonym: Gbem_0361
Alternate gene names: NA
Gene position: 439309-440115 (Clockwise)
Preceding gene: 197116760
Following gene: 197116764
Centisome position: 9.52
GC content: 62.33
Gene sequence:
>807_bases ATGCAAACTGCCCAGGACAAGTACTTGAAGTTGCAGGAAATCCTGCGCGAAATGGGGTCGCTCTTGGTCGCTTTTTCGGG CGGCGTCGACTCTACCTTTCTTCTTAAGGCCGCCTTCGACACCTTGGGCGCAGAACGGGTGTTAGCGGTCACCGCCACCT CCCCGACCTATCCCGAATCTGAACTCGCCGAGGCGAAGAGGCTCGCGACCCGGATCGGAGCCCGCCAGGAGCTCGTGGTC TCCAACGAACTGGAGATACCCGGCTTCCGCCACAACCCCAAGGACCGCTGCTACCACTGCAAAAGCGAGTTGTTCCGGAT CTGCACGGAGAAGGCGCGCGACAACGGGTTTGCCTTCGTCGCCGACGGGAGCAACACAGACGATCTGGGCGACTACCGCC CCGGCCGCACCGCCGCCTGTGAACTGAAGGTGCGTTCGCCGCTTCTGGAAGCTGGCCTCTCCAAAGGGGATATTCGCGAG TTGAGCCGCGGGCTCGGGCTCCCCACCTGGGACAAGCAGGCCTATGCCTGCCTGGCCAGCCGTTTCCCCTATGGGACCGA GATCACCGAGCAGAGGCTGAACCAGGTGGAGCGCTGCGAGGAGTTCTTGAAGGGGGAGGGGTTCACCGTGTATCGGGTGA GGTTTCACTTGGAGAGTGCGCGCATCGAATTGAGCGAGGCGGAACTGCCGCGCATGCTGGAGCCCTCCCTCAGGGGGAGG ACCATTGAGTTTTTCCGCGCCGCCGGATTCACTTATGTGTCGCTGGACCTGCAGGGGTATCGTACCGGGAGCATGAACGA GGGGTAG
Upstream 100 bases:
>100_bases GACCACCGCTTCATGTACTTCATCTAGGGGCTGGGCGGAAAGGGGACTGCCGGCAGAGACATGCTGCCGCGGCGCCGCCG GCCCTGCCCGCAAAGAACTT
Downstream 100 bases:
>100_bases GGCGCCCGGCGCCCTATTTCACCTCGACTGTTACCGGCATGACACCGGTTTTGGGTAGGACTATGGTGAGGACGCCGTAG TCGCAGCTGGCGCTGACGGC
Product: adenosine nucleotide alpha-hydrolase superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MQTAQDKYLKLQEILREMGSLLVAFSGGVDSTFLLKAAFDTLGAERVLAVTATSPTYPESELAEAKRLATRIGARQELVV SNELEIPGFRHNPKDRCYHCKSELFRICTEKARDNGFAFVADGSNTDDLGDYRPGRTAACELKVRSPLLEAGLSKGDIRE LSRGLGLPTWDKQAYACLASRFPYGTEITEQRLNQVERCEEFLKGEGFTVYRVRFHLESARIELSEAELPRMLEPSLRGR TIEFFRAAGFTYVSLDLQGYRTGSMNEG
Sequences:
>Translated_268_residues MQTAQDKYLKLQEILREMGSLLVAFSGGVDSTFLLKAAFDTLGAERVLAVTATSPTYPESELAEAKRLATRIGARQELVV SNELEIPGFRHNPKDRCYHCKSELFRICTEKARDNGFAFVADGSNTDDLGDYRPGRTAACELKVRSPLLEAGLSKGDIRE LSRGLGLPTWDKQAYACLASRFPYGTEITEQRLNQVERCEEFLKGEGFTVYRVRFHLESARIELSEAELPRMLEPSLRGR TIEFFRAAGFTYVSLDLQGYRTGSMNEG >Mature_268_residues MQTAQDKYLKLQEILREMGSLLVAFSGGVDSTFLLKAAFDTLGAERVLAVTATSPTYPESELAEAKRLATRIGARQELVV SNELEIPGFRHNPKDRCYHCKSELFRICTEKARDNGFAFVADGSNTDDLGDYRPGRTAACELKVRSPLLEAGLSKGDIRE LSRGLGLPTWDKQAYACLASRFPYGTEITEQRLNQVERCEEFLKGEGFTVYRVRFHLESARIELSEAELPRMLEPSLRGR TIEFFRAAGFTYVSLDLQGYRTGSMNEG
Specific function: Unknown
COG id: COG1606
COG function: function code R; ATP-utilizing enzymes of the PP-loop superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0830 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005232 - InterPro: IPR022310 - InterPro: IPR014729 [H]
Pfam domain/function: PF02540 NAD_synthase [H]
EC number: NA
Molecular weight: Translated: 30027; Mature: 30027
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTAQDKYLKLQEILREMGSLLVAFSGGVDSTFLLKAAFDTLGAERVLAVTATSPTYPES CCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHH ELAEAKRLATRIGARQELVVSNELEIPGFRHNPKDRCYHCKSELFRICTEKARDNGFAFV HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE ADGSNTDDLGDYRPGRTAACELKVRSPLLEAGLSKGDIRELSRGLGLPTWDKQAYACLAS ECCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH RFPYGTEITEQRLNQVERCEEFLKGEGFTVYRVRFHLESARIELSEAELPRMLEPSLRGR CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEHHHEEECHHCCCHHCCCCCCCC TIEFFRAAGFTYVSLDLQGYRTGSMNEG HHHHHHHCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure MQTAQDKYLKLQEILREMGSLLVAFSGGVDSTFLLKAAFDTLGAERVLAVTATSPTYPES CCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHH ELAEAKRLATRIGARQELVVSNELEIPGFRHNPKDRCYHCKSELFRICTEKARDNGFAFV HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE ADGSNTDDLGDYRPGRTAACELKVRSPLLEAGLSKGDIRELSRGLGLPTWDKQAYACLAS ECCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH RFPYGTEITEQRLNQVERCEEFLKGEGFTVYRVRFHLESARIELSEAELPRMLEPSLRGR CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEHHHEEECHHCCCHHCCCCCCCC TIEFFRAAGFTYVSLDLQGYRTGSMNEG HHHHHHHCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]