| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116753
Identifier: 197116753
GI number: 197116753
Start: 434785
End: 435156
Strand: Direct
Name: 197116753
Synonym: Gbem_0353
Alternate gene names: NA
Gene position: 434785-435156 (Clockwise)
Preceding gene: 197116748
Following gene: 197116759
Centisome position: 9.42
GC content: 63.44
Gene sequence:
>372_bases ATGAGACTTGCAGAACTCTTTCCAGAGGGGGGACGAGGCATCATCGCCACCGCTGACGCGGCAGGCGTGGTCAACCAGGC GGTCTTCGCCATACCTCATGTAGTGGACGAGCAGACGCTGGCCTGGGGCTTCAGCGAGGGGCGCACGATCGCCAACTTGA GGGAGAACCCGCACGCGAGCTACCTTTACCTCGCACCGTCCAGGGGATACAACGGCTGGAGATTGACCTTGACCATGGCC GAGGAAGCCGGCGAGGGGGAAATGCTGGAGAACATCAGGGAAAGGACGGCGCAGGTGGCGAGCCCTCAGGCGAGCGCTGC GGTGACCCGGGTGGCCTACTTCAAGGTGGAAGAGGTGCGCCCCCTGATGTGA
Upstream 100 bases:
>100_bases CTCATTGGCGCAGCGCTCCCAGCTGTTATGGACAATCCTTTTGAACCTGCTAAGTTATCATAGTGCTAAATCAGCTTAAA GGAAAAAGGGGGTGCAACAC
Downstream 100 bases:
>100_bases CTAGCGCTTGGGCGGGGTCTCCAGGATGAAGGTCACCGGACCGTCGTTCACCAGGGAGACCTCCATATCAGCCTGAAAGA TCCCGCTTTGCACCGGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MRLAELFPEGGRGIIATADAAGVVNQAVFAIPHVVDEQTLAWGFSEGRTIANLRENPHASYLYLAPSRGYNGWRLTLTMA EEAGEGEMLENIRERTAQVASPQASAAVTRVAYFKVEEVRPLM
Sequences:
>Translated_123_residues MRLAELFPEGGRGIIATADAAGVVNQAVFAIPHVVDEQTLAWGFSEGRTIANLRENPHASYLYLAPSRGYNGWRLTLTMA EEAGEGEMLENIRERTAQVASPQASAAVTRVAYFKVEEVRPLM >Mature_123_residues MRLAELFPEGGRGIIATADAAGVVNQAVFAIPHVVDEQTLAWGFSEGRTIANLRENPHASYLYLAPSRGYNGWRLTLTMA EEAGEGEMLENIRERTAQVASPQASAAVTRVAYFKVEEVRPLM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13448; Mature: 13448
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLAELFPEGGRGIIATADAAGVVNQAVFAIPHVVDEQTLAWGFSEGRTIANLRENPHAS CCCHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCCC YLYLAPSRGYNGWRLTLTMAEEAGEGEMLENIRERTAQVASPQASAAVTRVAYFKVEEVR EEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHEEEHHCCC PLM CCC >Mature Secondary Structure MRLAELFPEGGRGIIATADAAGVVNQAVFAIPHVVDEQTLAWGFSEGRTIANLRENPHAS CCCHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCCC YLYLAPSRGYNGWRLTLTMAEEAGEGEMLENIRERTAQVASPQASAAVTRVAYFKVEEVR EEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHEEEHHCCC PLM CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA