| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104458
Identifier: 197104458
GI number: 197104458
Start: 1100709
End: 1101794
Strand: Direct
Name: 197104458
Synonym: PHZ_c0992
Alternate gene names: NA
Gene position: 1100709-1101794 (Clockwise)
Preceding gene: 197104457
Following gene: 197104459
Centisome position: 27.54
GC content: 75.87
Gene sequence:
>1086_bases ATGAACCTGCGCACGCTGCTGGCCGACCTGCCGATCCCGATCCTCCAGGCCCCCATGGTCGGAGCGACGACGGCGGGCAT CGCGCTGGCGGTGAGCCGCGCCGGGGGCATGGGCTGGCTGGCGGCGGGGGCCATGGCGGCGGCGGACATCGAGGCCGAGG TCGCCGCGCTGAAGGCCGCGCTCGACGCGCCGTTCGGCGTGAACCTGCTGATGGCGCCCAAGGCTGCGCCCGAGCGGTGG GAGGTGGACGCCGCGCTCGCCCGCCTGGCCCCGTGGTACGAGGAGTTGGGCGCGGCGAGGCCGGCGCTGCCCAACCAGTA CGCGCCGGACTTCGACTCCCAGCTGGAGGCGGTGATCCGCTCGGCTCCGCCGGTCGCCTCCTTCACCTTCGACATTCTGA CGCGGGATCAGGTGGACGCCCTGCACGGCGCCGGCACCCTGGTGATCGGCACGGCGGCGACCGTCGCCGAGGCGCGCGCG TGGGCGCAGGCCGGCGCCGACGGCGTCTGCGCCCAGGGCTTCGAGGCCGGCGGCCACCGGGGCAATTTCCTGGCGGGGAT CGAGGGCAGCCTGGTCGGGACGATGGCGCTGGTGACGACGATCCGCGAGGCGGTGGACCTGCCGGTGATCGCCGCGGGCG GGATCATGGACGGGCGCGGGGTCGCCGCCGCCCTGGCGCTCGGCGCGGACGCGGTCCAGATGGGCACCGCCTTCCTGCTG GCCGACGAGGCGGCGACCGGCGCCACCTGGCGCGGCGCGCTGGCGGCCGCCGCAGACGACCCGACCCGGCTCACGCGCGC CTTCACCGGCCGCTATGCCCGCGGCGTCGAGAACCGCTTCATGCGCGAGATGCACGACGTCCAGGAGGACGTGCCCGCCT ATCCCGTGCAGAACCGCCTGACCCAGCCGCTCCGTGCGGCCGCGGACCGGGCGGGCGATCCCGAAATGATGTCCCTGTGG GCCGGGCAGGGGGTGAAGCTCGCGCGGCCGGGCCCGGCGGGCGAGCTGATCCGCCGGTGGTGGGACGAGGCCCGGACCGC CGGGGACGCGGTCGTCCGGCGTACAAGGGGAGAGGAGGGGCCATGA
Upstream 100 bases:
>100_bases AGGAGGTCCGCACTCTGCGGGGCGTGGTCACCGCCCTGTCCCGCGGACGCGGCAAGGTGCTGGAGAAGATCGCCCGCAAG GGCGCGCCCGAGGGCGACGG
Downstream 100 bases:
>100_bases CCGACCTGAGAACCGCGGCCCGCGAGGCCTGGATCTACACCCTGCCGCTGGTGGAGGTGGCCACCACGCGGCAGCGGGGC CAGGCCCTGGGTCACCACAT
Product: 2-nitropropane dioxygenase-like protein
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MNLRTLLADLPIPILQAPMVGATTAGIALAVSRAGGMGWLAAGAMAAADIEAEVAALKAALDAPFGVNLLMAPKAAPERW EVDAALARLAPWYEELGAARPALPNQYAPDFDSQLEAVIRSAPPVASFTFDILTRDQVDALHGAGTLVIGTAATVAEARA WAQAGADGVCAQGFEAGGHRGNFLAGIEGSLVGTMALVTTIREAVDLPVIAAGGIMDGRGVAAALALGADAVQMGTAFLL ADEAATGATWRGALAAAADDPTRLTRAFTGRYARGVENRFMREMHDVQEDVPAYPVQNRLTQPLRAAADRAGDPEMMSLW AGQGVKLARPGPAGELIRRWWDEARTAGDAVVRRTRGEEGP
Sequences:
>Translated_361_residues MNLRTLLADLPIPILQAPMVGATTAGIALAVSRAGGMGWLAAGAMAAADIEAEVAALKAALDAPFGVNLLMAPKAAPERW EVDAALARLAPWYEELGAARPALPNQYAPDFDSQLEAVIRSAPPVASFTFDILTRDQVDALHGAGTLVIGTAATVAEARA WAQAGADGVCAQGFEAGGHRGNFLAGIEGSLVGTMALVTTIREAVDLPVIAAGGIMDGRGVAAALALGADAVQMGTAFLL ADEAATGATWRGALAAAADDPTRLTRAFTGRYARGVENRFMREMHDVQEDVPAYPVQNRLTQPLRAAADRAGDPEMMSLW AGQGVKLARPGPAGELIRRWWDEARTAGDAVVRRTRGEEGP >Mature_361_residues MNLRTLLADLPIPILQAPMVGATTAGIALAVSRAGGMGWLAAGAMAAADIEAEVAALKAALDAPFGVNLLMAPKAAPERW EVDAALARLAPWYEELGAARPALPNQYAPDFDSQLEAVIRSAPPVASFTFDILTRDQVDALHGAGTLVIGTAATVAEARA WAQAGADGVCAQGFEAGGHRGNFLAGIEGSLVGTMALVTTIREAVDLPVIAAGGIMDGRGVAAALALGADAVQMGTAFLL ADEAATGATWRGALAAAADDPTRLTRAFTGRYARGVENRFMREMHDVQEDVPAYPVQNRLTQPLRAAADRAGDPEMMSLW AGQGVKLARPGPAGELIRRWWDEARTAGDAVVRRTRGEEGP
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=363, Percent_Identity=28.099173553719, Blast_Score=108, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 37492; Mature: 37492
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRTLLADLPIPILQAPMVGATTAGIALAVSRAGGMGWLAAGAMAAADIEAEVAALKAA CCHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LDAPFGVNLLMAPKAAPERWEVDAALARLAPWYEELGAARPALPNQYAPDFDSQLEAVIR HCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH SAPPVASFTFDILTRDQVDALHGAGTLVIGTAATVAEARAWAQAGADGVCAQGFEAGGHR CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GNFLAGIEGSLVGTMALVTTIREAVDLPVIAAGGIMDGRGVAAALALGADAVQMGTAFLL CCEEECCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCHHHHHCCEEEE ADEAATGATWRGALAAAADDPTRLTRAFTGRYARGVENRFMREMHDVQEDVPAYPVQNRL ECCCCCCCCHHCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH TQPLRAAADRAGDPEMMSLWAGQGVKLARPGPAGELIRRWWDEARTAGDAVVRRTRGEEG HHHHHHHHHCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC P C >Mature Secondary Structure MNLRTLLADLPIPILQAPMVGATTAGIALAVSRAGGMGWLAAGAMAAADIEAEVAALKAA CCHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LDAPFGVNLLMAPKAAPERWEVDAALARLAPWYEELGAARPALPNQYAPDFDSQLEAVIR HCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH SAPPVASFTFDILTRDQVDALHGAGTLVIGTAATVAEARAWAQAGADGVCAQGFEAGGHR CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GNFLAGIEGSLVGTMALVTTIREAVDLPVIAAGGIMDGRGVAAALALGADAVQMGTAFLL CCEEECCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCHHHHHCCEEEE ADEAATGATWRGALAAAADDPTRLTRAFTGRYARGVENRFMREMHDVQEDVPAYPVQNRL ECCCCCCCCHHCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH TQPLRAAADRAGDPEMMSLWAGQGVKLARPGPAGELIRRWWDEARTAGDAVVRRTRGEEG HHHHHHHHHCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA