| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is tauD [H]
Identifier: 197104403
GI number: 197104403
Start: 1028523
End: 1029392
Strand: Direct
Name: tauD [H]
Synonym: PHZ_c0937
Alternate gene names: 197104403
Gene position: 1028523-1029392 (Clockwise)
Preceding gene: 197104402
Following gene: 197104406
Centisome position: 25.74
GC content: 70.57
Gene sequence:
>870_bases ATGAGCCAGAGCCTTCAGATCCGCCGCATCGCCGGCGCCCTGGGCGCCGAGATCTCCGGCGTGGACCTGTCGCAGGACCT GCCCGACCAGACGATCGCCGCCATCCGCCGGGCCCTCGTCGAGCATCAGGTGATCTTCTTCCGCGGCCAGGCGCTGACGC CCGAGCGGCAGGTCGCCTTCGGCGCCCGTTTCGGCCCGCTGAACGTCCATCCCTTCGTCGCCGGCATGGCGGGCCAGCCC GCGGTCATGGAGATCATCAAGGAGCCGCAGGACCGGGTGAACTTCGGCGGCGGCTGGCACTCGGACATGAGCTTCCTGGA GCGGCCGTCGATCGGCTCGATCCTCTACGCCGTGGAGGTTCCGGACTTCGGCGGCGACACCCTGTTCGCCAGCCAGGCGG CCGCCTTCGAGGCCCTGTCGCCCGGCCTGCAGAAGACGCTGGAAGGGCTGAACGCCGTCCACTCGGCCAGCCGCGAGTAC TCCGCCAGGGGCCACTCGGCCCAGAAGCGCAGCGCGATGTCCGTCGCCGAGGCCGACGGCTACGTCGGCGAGTACGTCCA CCCGGTGGTGCTCGTCCACCCCGAGACGGGCCGCAAGGCGCTCTACGTCAATCCGGCCTTCACCCTGCGGATCGACGGCT GGTCCAAGCGGGAATCCAAGCCGCTGCTCGACTACCTCTTCGAGCATTCCCGCTACGAGGGCTTCACCTGCCGGTTCCGG TGGGAGCCGGGCTCGGTGGCCTTCTGGGACAACCGTTCTGTCTGGCACTTCGCCCTGAACGACTACCCCGGCCAGCGCCG CCACATGCGCCGGGTGACGGTCGACCCCTGGCCGGTGGAGGCCTCAGCCCGCGCGGGCGCCGCCGCCTAG
Upstream 100 bases:
>100_bases CCGCCGCTAGGGCCTTTCAGCGGGGCTGCAAGCCTCATCAGTCTTCCCCCGGTGGCGCCGTCGCCTGCGCGTAGTAGCGT TCGGCCAGGAGGAGCCTCGG
Downstream 100 bases:
>100_bases CTGCGCCAGCACCCCGTCGGCCGCCGCCAGGCCCGTGGCGAAGCTCGCCTGCAGCAGGTAGCCGCCGGTGGGGGCTTCCC AGTCCAGCATCTCGCCGGCG
Product: alpha-ketoglutarate-dependent taurine dioxygenase
Products: NA
Alternate protein names: 2-aminoethanesulfonate dioxygenase; Sulfate starvation-induced protein 3; SSI3 [H]
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSQSLQIRRIAGALGAEISGVDLSQDLPDQTIAAIRRALVEHQVIFFRGQALTPERQVAFGARFGPLNVHPFVAGMAGQP AVMEIIKEPQDRVNFGGGWHSDMSFLERPSIGSILYAVEVPDFGGDTLFASQAAAFEALSPGLQKTLEGLNAVHSASREY SARGHSAQKRSAMSVAEADGYVGEYVHPVVLVHPETGRKALYVNPAFTLRIDGWSKRESKPLLDYLFEHSRYEGFTCRFR WEPGSVAFWDNRSVWHFALNDYPGQRRHMRRVTVDPWPVEASARAGAAA
Sequences:
>Translated_289_residues MSQSLQIRRIAGALGAEISGVDLSQDLPDQTIAAIRRALVEHQVIFFRGQALTPERQVAFGARFGPLNVHPFVAGMAGQP AVMEIIKEPQDRVNFGGGWHSDMSFLERPSIGSILYAVEVPDFGGDTLFASQAAAFEALSPGLQKTLEGLNAVHSASREY SARGHSAQKRSAMSVAEADGYVGEYVHPVVLVHPETGRKALYVNPAFTLRIDGWSKRESKPLLDYLFEHSRYEGFTCRFR WEPGSVAFWDNRSVWHFALNDYPGQRRHMRRVTVDPWPVEASARAGAAA >Mature_288_residues SQSLQIRRIAGALGAEISGVDLSQDLPDQTIAAIRRALVEHQVIFFRGQALTPERQVAFGARFGPLNVHPFVAGMAGQPA VMEIIKEPQDRVNFGGGWHSDMSFLERPSIGSILYAVEVPDFGGDTLFASQAAAFEALSPGLQKTLEGLNAVHSASREYS ARGHSAQKRSAMSVAEADGYVGEYVHPVVLVHPETGRKALYVNPAFTLRIDGWSKRESKPLLDYLFEHSRYEGFTCRFRW EPGSVAFWDNRSVWHFALNDYPGQRRHMRRVTVDPWPVEASARAGAAA
Specific function: Catalyzes the conversion of taurine and alpha ketoglutarate to sulfite, aminoacetaldehyde and succinate. Required for the utilization of taurine (2-aminoethanesulfonic acid) as an alternative sulfur source. Pentane-sulfonic acid, 3- (N-morpholino)propanes
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tfdA dioxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786565, Length=274, Percent_Identity=39.051094890511, Blast_Score=203, Evalue=9e-54, Organism=Saccharomyces cerevisiae, GI6322971, Length=284, Percent_Identity=32.7464788732394, Blast_Score=144, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: =1.14.11.17 [H]
Molecular weight: Translated: 31936; Mature: 31805
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSLQIRRIAGALGAEISGVDLSQDLPDQTIAAIRRALVEHQVIFFRGQALTPERQVAF CCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCHHHEE GARFGPLNVHPFVAGMAGQPAVMEIIKEPQDRVNFGGGWHSDMSFLERPSIGSILYAVEV CCCCCCCCCCHHEECCCCCHHHHHHHHCCHHHCCCCCCCCHHHHHHCCCCCCCEEEEEEC PDFGGDTLFASQAAAFEALSPGLQKTLEGLNAVHSASREYSARGHSAQKRSAMSVAEADG CCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC YVGEYVHPVVLVHPETGRKALYVNPAFTLRIDGWSKRESKPLLDYLFEHSRYEGFTCRFR CCCCCCCCEEEEECCCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEE WEPGSVAFWDNRSVWHFALNDYPGQRRHMRRVTVDPWPVEASARAGAAA ECCCCEEEECCCCEEEEEECCCCCCHHHHEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure SQSLQIRRIAGALGAEISGVDLSQDLPDQTIAAIRRALVEHQVIFFRGQALTPERQVAF CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCHHHEE GARFGPLNVHPFVAGMAGQPAVMEIIKEPQDRVNFGGGWHSDMSFLERPSIGSILYAVEV CCCCCCCCCCHHEECCCCCHHHHHHHHCCHHHCCCCCCCCHHHHHHCCCCCCCEEEEEEC PDFGGDTLFASQAAAFEALSPGLQKTLEGLNAVHSASREYSARGHSAQKRSAMSVAEADG CCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC YVGEYVHPVVLVHPETGRKALYVNPAFTLRIDGWSKRESKPLLDYLFEHSRYEGFTCRFR CCCCCCCCEEEEECCCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEE WEPGSVAFWDNRSVWHFALNDYPGQRRHMRRVTVDPWPVEASARAGAAA ECCCCEEEECCCCEEEEEECCCCCCHHHHEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 2656410; 8774726; 7984428; 9287300; 11955067 [H]