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The map label for this gene is cckA [C]

Identifier: 197104399

GI number: 197104399

Start: 1023921

End: 1026026

Strand: Direct

Name: cckA [C]

Synonym: PHZ_c0933

Alternate gene names: 197104399

Gene position: 1023921-1026026 (Clockwise)

Preceding gene: 197104398

Following gene: 197104400

Centisome position: 25.62

GC content: 72.27

Gene sequence:

>2106_bases
ATGCAGACGATTGATTCGCCGGAGGCGCCGTCGCTCGCCATGGCCGAGCCGCCGTCCAAGCCAAAGCCGCGCTTCGACCT
CCTGACGGGGGCCGCCGTCGTCTTCTTCCTGATGGCGGTGGCGTTCGCGGCTGCGCCGGCGCTCGACGCCGGACCCGAGA
CCCTGGCCAGCATGCTGCTGCTGATCGGCTTGGCCGGCGTCTCGTGCCTGGGCCTCTTCGTGCTGCGCACGGGGACAGAG
CCCGCGGCCGAGCCGGAGCAGGGCGCCGACGTCTTCCTCCAGGCGCTGGACGAGCCGGCCGCCATCGCCACGCCCGACGG
ACGGCTGTCGTTCGCCAACGCGGCCTGGCGCGAGGCGATGGGTCCGGCCATGCGCCTGCCCAAGACCGGCGCGGCCGCCG
CCAGCCTGTTCGGCGCCCTGGCCGCCGCCCGCCGGGGCGAGCTGGGCCGCGCCCTGCTGAAGGCCGCGGGCGAGGAGCGC
ACGGCGCTCATTTCGCCGGTCGGCCCGCGCCGCTATCTCGTGCGCCTCACCGGCGGCGGCGGAACGCTGGCGCTGCCATC
CGCGGCCATGGAGGTGCTGAACGCCTTCCAGACGGCCAAGGCCCCGCCGCCCAAGGTGCTGGACGCCTTCGCCGCCGCCT
CGCCCTTCGGCGCCGCCCTGCTGGATGGCGAGGACCCGTTCCTGGCCACCATCGTCGAGGCCAACCCGGCGCTGAAGGCG
GTGGCCGGCGGCGGCCAGGCGGGCCAGGCGTTCGGCGGCCTGATCGAGCCCGCCAGCCGGGCCGACGCGGCCCAGCGGCT
GGCCGACGGCAAGGCGCCGCTGGAGGTCCGCCTCGCCCATGACCCGACCCGCATCGCCCACCTGTACCTCTCCAAGAGCG
ACGGCCGCTGGGTGGCCTATCTGGTCGACGTCTCGGAGCAGAAGCAGATCGAGCTGCAGCTCGCGCAGAGCCAGAAGATG
CAGGCCATCGGCCAGCTCGCCGGCGGCGTGGCCCACGACTTCAACAACCTGCTTACCGCCATCCTGATGCAGCTCGACGT
GCTGGCGACCCGGCACCCGGTGGGCGATCCCTCGTACGAGGGGCTGAACGAGATCAAGCAGACCTCGATGCGGGCCGCCG
ACCTCGTCCGCAAGCTGCTGGCGTTCTCGCGCAAGCAGACGGTCCAGCGCGAGATCCTGGACGTGGGCGAGATGATCTCG
GAATCCGAGGTGCTGCTCCGTCGCCTGCTGCCAGAGGACGTCAAGCTCGCGACCGACTACGGCCGCAACCTGCCGCAGGT
GCGCGCCGACCGCGGGCAGCTCGACACGGCCATCATGAACCTGGTGGTCAACGCCCGCGACGCGATCAAGACCCACGGCG
GCGGCGCGATCCGCATCCGCACGGCCAGGCTGACCCAGGAGGAGGCCCGCGGCATGGGCTATCCCACGGCCCAGGGCGAC
CAGGCGCTGATCGAGGTTTCGGACGACGGCCCCGGCATCCCCCCCGAGGCGCTGGACAAGATCTTCGACCCCTTCTTCAC
CACCAAGCCGGTGGGCGAGGGCACGGGCCTGGGGCTCGCCACCGTCTACGGCATCGTCAAGCAGTCCGACGGCTGGATCA
GCGTGGACTCCAGGCCCGGCGAAGGCGCGGCCTTCCGGATCTTCCTGCCGGTCCACGTGCCGGCGGCCGTGGTGGCTCCG
GCGCCGCAGCCCATCGCCAAGGCCAAGCGGCCCGCCGCCCGCGACCTGTCGGGCGCCGGCCGGATCCTGTTCGTCGAGGA
CGAGGACGCCGTCCGCGGCGTGGCGGCCAAGCTGCTGCGGGCCCGCGGCTACGAGGTGATCGAGGCGGCCAGCGGCGAGG
AGGCCCTGGAACTGGCCGAGGCCAACGCCGGCAAGATCGACCTGATGATCTCGGACGTGGTCATGCCCGGCATGCAGGGG
CCCGACCTGCTCAAGCAGGCCCGCGGCTATCTGGGGGCGGCTCCGGTGATGTTCATCTCGGGCTACGCCGAGAGCGAGTT
CTCGGACCTGCTCGAGGGGGAACGGAACGTCTCGTTCCTGCCCAAGCCCATCGACATCAAGACCCTGGCCGAGCGCGTGA
AGCAGGAGCTGCAGAAGGCCGCGTGA

Upstream 100 bases:

>100_bases
GACGACATGATCCCCCCCGCCCACTACGAGGCGGTGGCCAAGATCATCGGCTTCATCCTCAACCGCGGACGTCGTGCCGT
GGCCAAGCCCCTGTGACACA

Downstream 100 bases:

>100_bases
CGCTTGCCTCCGCGGCCGGGCGCCTCCAAAGATCGGCGTTCCATCCCAAGCGAAGCGTCCGACGTGTCCAGTTCCCCTCC
GGCCGAACCGCAGGCCCCTG

Product: cell cycle histidine kinase

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 701; Mature: 701

Protein sequence:

>701_residues
MQTIDSPEAPSLAMAEPPSKPKPRFDLLTGAAVVFFLMAVAFAAAPALDAGPETLASMLLLIGLAGVSCLGLFVLRTGTE
PAAEPEQGADVFLQALDEPAAIATPDGRLSFANAAWREAMGPAMRLPKTGAAAASLFGALAAARRGELGRALLKAAGEER
TALISPVGPRRYLVRLTGGGGTLALPSAAMEVLNAFQTAKAPPPKVLDAFAAASPFGAALLDGEDPFLATIVEANPALKA
VAGGGQAGQAFGGLIEPASRADAAQRLADGKAPLEVRLAHDPTRIAHLYLSKSDGRWVAYLVDVSEQKQIELQLAQSQKM
QAIGQLAGGVAHDFNNLLTAILMQLDVLATRHPVGDPSYEGLNEIKQTSMRAADLVRKLLAFSRKQTVQREILDVGEMIS
ESEVLLRRLLPEDVKLATDYGRNLPQVRADRGQLDTAIMNLVVNARDAIKTHGGGAIRIRTARLTQEEARGMGYPTAQGD
QALIEVSDDGPGIPPEALDKIFDPFFTTKPVGEGTGLGLATVYGIVKQSDGWISVDSRPGEGAAFRIFLPVHVPAAVVAP
APQPIAKAKRPAARDLSGAGRILFVEDEDAVRGVAAKLLRARGYEVIEAASGEEALELAEANAGKIDLMISDVVMPGMQG
PDLLKQARGYLGAAPVMFISGYAESEFSDLLEGERNVSFLPKPIDIKTLAERVKQELQKAA

Sequences:

>Translated_701_residues
MQTIDSPEAPSLAMAEPPSKPKPRFDLLTGAAVVFFLMAVAFAAAPALDAGPETLASMLLLIGLAGVSCLGLFVLRTGTE
PAAEPEQGADVFLQALDEPAAIATPDGRLSFANAAWREAMGPAMRLPKTGAAAASLFGALAAARRGELGRALLKAAGEER
TALISPVGPRRYLVRLTGGGGTLALPSAAMEVLNAFQTAKAPPPKVLDAFAAASPFGAALLDGEDPFLATIVEANPALKA
VAGGGQAGQAFGGLIEPASRADAAQRLADGKAPLEVRLAHDPTRIAHLYLSKSDGRWVAYLVDVSEQKQIELQLAQSQKM
QAIGQLAGGVAHDFNNLLTAILMQLDVLATRHPVGDPSYEGLNEIKQTSMRAADLVRKLLAFSRKQTVQREILDVGEMIS
ESEVLLRRLLPEDVKLATDYGRNLPQVRADRGQLDTAIMNLVVNARDAIKTHGGGAIRIRTARLTQEEARGMGYPTAQGD
QALIEVSDDGPGIPPEALDKIFDPFFTTKPVGEGTGLGLATVYGIVKQSDGWISVDSRPGEGAAFRIFLPVHVPAAVVAP
APQPIAKAKRPAARDLSGAGRILFVEDEDAVRGVAAKLLRARGYEVIEAASGEEALELAEANAGKIDLMISDVVMPGMQG
PDLLKQARGYLGAAPVMFISGYAESEFSDLLEGERNVSFLPKPIDIKTLAERVKQELQKAA
>Mature_701_residues
MQTIDSPEAPSLAMAEPPSKPKPRFDLLTGAAVVFFLMAVAFAAAPALDAGPETLASMLLLIGLAGVSCLGLFVLRTGTE
PAAEPEQGADVFLQALDEPAAIATPDGRLSFANAAWREAMGPAMRLPKTGAAAASLFGALAAARRGELGRALLKAAGEER
TALISPVGPRRYLVRLTGGGGTLALPSAAMEVLNAFQTAKAPPPKVLDAFAAASPFGAALLDGEDPFLATIVEANPALKA
VAGGGQAGQAFGGLIEPASRADAAQRLADGKAPLEVRLAHDPTRIAHLYLSKSDGRWVAYLVDVSEQKQIELQLAQSQKM
QAIGQLAGGVAHDFNNLLTAILMQLDVLATRHPVGDPSYEGLNEIKQTSMRAADLVRKLLAFSRKQTVQREILDVGEMIS
ESEVLLRRLLPEDVKLATDYGRNLPQVRADRGQLDTAIMNLVVNARDAIKTHGGGAIRIRTARLTQEEARGMGYPTAQGD
QALIEVSDDGPGIPPEALDKIFDPFFTTKPVGEGTGLGLATVYGIVKQSDGWISVDSRPGEGAAFRIFLPVHVPAAVVAP
APQPIAKAKRPAARDLSGAGRILFVEDEDAVRGVAAKLLRARGYEVIEAASGEEALELAEANAGKIDLMISDVVMPGMQG
PDLLKQARGYLGAAPVMFISGYAESEFSDLLEGERNVSFLPKPIDIKTLAERVKQELQKAA

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790436, Length=242, Percent_Identity=32.2314049586777, Blast_Score=116, Evalue=5e-27,
Organism=Escherichia coli, GI1788549, Length=268, Percent_Identity=31.3432835820896, Blast_Score=115, Evalue=1e-26,
Organism=Escherichia coli, GI1790300, Length=260, Percent_Identity=31.1538461538462, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI87081816, Length=290, Percent_Identity=26.551724137931, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788713, Length=286, Percent_Identity=27.6223776223776, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI145693157, Length=312, Percent_Identity=26.2820512820513, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI48994928, Length=226, Percent_Identity=30.0884955752212, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1786912, Length=246, Percent_Identity=27.2357723577236, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1790346, Length=245, Percent_Identity=27.3469387755102, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 73795; Mature: 73795

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTIDSPEAPSLAMAEPPSKPKPRFDLLTGAAVVFFLMAVAFAAAPALDAGPETLASMLL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LIGLAGVSCLGLFVLRTGTEPAAEPEQGADVFLQALDEPAAIATPDGRLSFANAAWREAM
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHC
GPAMRLPKTGAAAASLFGALAAARRGELGRALLKAAGEERTALISPVGPRRYLVRLTGGG
CHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCC
GTLALPSAAMEVLNAFQTAKAPPPKVLDAFAAASPFGAALLDGEDPFLATIVEANPALKA
CCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCHHH
VAGGGQAGQAFGGLIEPASRADAAQRLADGKAPLEVRLAHDPTRIAHLYLSKSDGRWVAY
CCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECCCCCEEEE
LVDVSEQKQIELQLAQSQKMQAIGQLAGGVAHDFNNLLTAILMQLDVLATRHPVGDPSYE
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
GLNEIKQTSMRAADLVRKLLAFSRKQTVQREILDVGEMISESEVLLRRLLPEDVKLATDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GRNLPQVRADRGQLDTAIMNLVVNARDAIKTHGGGAIRIRTARLTQEEARGMGYPTAQGD
CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCHHHHCCCCCCCCCCC
QALIEVSDDGPGIPPEALDKIFDPFFTTKPVGEGTGLGLATVYGIVKQSDGWISVDSRPG
CEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCC
EGAAFRIFLPVHVPAAVVAPAPQPIAKAKRPAARDLSGAGRILFVEDEDAVRGVAAKLLR
CCCEEEEEEEECCCCCEECCCCCHHHHCCCCCHHCCCCCCCEEEECCCHHHHHHHHHHHH
ARGYEVIEAASGEEALELAEANAGKIDLMISDVVMPGMQGPDLLKQARGYLGAAPVMFIS
HCCCCEEECCCCHHHHHHHHCCCCEEEEEEHHHHCCCCCCHHHHHHHHCCCCCCHHHHEE
GYAESEFSDLLEGERNVSFLPKPIDIKTLAERVKQELQKAA
CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQTIDSPEAPSLAMAEPPSKPKPRFDLLTGAAVVFFLMAVAFAAAPALDAGPETLASMLL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LIGLAGVSCLGLFVLRTGTEPAAEPEQGADVFLQALDEPAAIATPDGRLSFANAAWREAM
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHC
GPAMRLPKTGAAAASLFGALAAARRGELGRALLKAAGEERTALISPVGPRRYLVRLTGGG
CHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCC
GTLALPSAAMEVLNAFQTAKAPPPKVLDAFAAASPFGAALLDGEDPFLATIVEANPALKA
CCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCHHH
VAGGGQAGQAFGGLIEPASRADAAQRLADGKAPLEVRLAHDPTRIAHLYLSKSDGRWVAY
CCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECCCCCEEEE
LVDVSEQKQIELQLAQSQKMQAIGQLAGGVAHDFNNLLTAILMQLDVLATRHPVGDPSYE
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
GLNEIKQTSMRAADLVRKLLAFSRKQTVQREILDVGEMISESEVLLRRLLPEDVKLATDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GRNLPQVRADRGQLDTAIMNLVVNARDAIKTHGGGAIRIRTARLTQEEARGMGYPTAQGD
CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCHHHHCCCCCCCCCCC
QALIEVSDDGPGIPPEALDKIFDPFFTTKPVGEGTGLGLATVYGIVKQSDGWISVDSRPG
CEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCC
EGAAFRIFLPVHVPAAVVAPAPQPIAKAKRPAARDLSGAGRILFVEDEDAVRGVAAKLLR
CCCEEEEEEEECCCCCEECCCCCHHHHCCCCCHHCCCCCCCEEEECCCHHHHHHHHHHHH
ARGYEVIEAASGEEALELAEANAGKIDLMISDVVMPGMQGPDLLKQARGYLGAAPVMFIS
HCCCCEEECCCCHHHHHHHHCCCCEEEEEEHHHHCCCCCCHHHHHHHHCCCCCCHHHHEE
GYAESEFSDLLEGERNVSFLPKPIDIKTLAERVKQELQKAA
CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA