| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is mutT [H]
Identifier: 197104231
GI number: 197104231
Start: 844967
End: 845371
Strand: Direct
Name: mutT [H]
Synonym: PHZ_c0765
Alternate gene names: 197104231
Gene position: 844967-845371 (Clockwise)
Preceding gene: 197104229
Following gene: 197104232
Centisome position: 21.14
GC content: 69.38
Gene sequence:
>405_bases ATGACCAAGCCCATGGTGCTCGTGGCCGCCGCGGCCCTCATCGATCCCGACGGCCGGGTGCTGATCTGCCAGCGGCCCGA AGGCAAGCAGCTGGCCGGCCTCTGGGAGTTTCCCGGCGGCAAGGTCGAACCCGGCGAGACCCCCGAGGCCTGCCTGATCC GCGAGCTGGACGAGGAGCTGGGGATCCGGGTGACGAAGTCGTGCCTCGCGTCCTTCGTTTTCGCCAGCCACGAGTACGAG AGCTTCCACCTGCTGATGCCGCTCTACCTGATCCGCCGCTGGGAGGGCCGGGTGACGGCGCGCGAGCACAAGGCGATCGC CTGGGTGAAGCCCGTGAAGCTCGCCGACTACGAGATGCCGCCGGCCGATGCGCCGCTGGTGGCCTGGCTGCGGGACTTCG TGTGA
Upstream 100 bases:
>100_bases AGGACCGCACATCGGGGTTCTGGGCGGCGAAGTCAACCCAGCGCGACCATTCGGCGAGCGCCTGTGGCCGAATTGGCGCC ATCGGGGTAAGTGCCGGCCC
Downstream 100 bases:
>100_bases TGAAGCAGGCGGCCCGCACGCTCACGGTCCAGACGCCCGGCCAGGGCCTGCACGAGATCACCCGCGAGGTCGCGGCCTTC GTCGCCGACGAGGGGATGGC
Product: NTP pyrophosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MTKPMVLVAAAALIDPDGRVLICQRPEGKQLAGLWEFPGGKVEPGETPEACLIRELDEELGIRVTKSCLASFVFASHEYE SFHLLMPLYLIRRWEGRVTAREHKAIAWVKPVKLADYEMPPADAPLVAWLRDFV
Sequences:
>Translated_134_residues MTKPMVLVAAAALIDPDGRVLICQRPEGKQLAGLWEFPGGKVEPGETPEACLIRELDEELGIRVTKSCLASFVFASHEYE SFHLLMPLYLIRRWEGRVTAREHKAIAWVKPVKLADYEMPPADAPLVAWLRDFV >Mature_133_residues TKPMVLVAAAALIDPDGRVLICQRPEGKQLAGLWEFPGGKVEPGETPEACLIRELDEELGIRVTKSCLASFVFASHEYES FHLLMPLYLIRRWEGRVTAREHKAIAWVKPVKLADYEMPPADAPLVAWLRDFV
Specific function: Specific for pyrimidine substrates. Acts on 5-methyl- dCTP, CTP and dCTP in decreasing order [H]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1788056, Length=119, Percent_Identity=42.8571428571429, Blast_Score=91, Evalue=2e-20, Organism=Escherichia coli, GI1786288, Length=124, Percent_Identity=33.8709677419355, Blast_Score=82, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.-
Molecular weight: Translated: 15086; Mature: 14955
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPMVLVAAAALIDPDGRVLICQRPEGKQLAGLWEFPGGKVEPGETPEACLIRELDEEL CCCCHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH GIRVTKSCLASFVFASHEYESFHLLMPLYLIRRWEGRVTAREHKAIAWVKPVKLADYEMP CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEECCCCCC PADAPLVAWLRDFV CCCCHHHHHHHHCC >Mature Secondary Structure TKPMVLVAAAALIDPDGRVLICQRPEGKQLAGLWEFPGGKVEPGETPEACLIRELDEEL CCCHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH GIRVTKSCLASFVFASHEYESFHLLMPLYLIRRWEGRVTAREHKAIAWVKPVKLADYEMP CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEECCCCCC PADAPLVAWLRDFV CCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 11053429 [H]