| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is exuT [H]
Identifier: 197104135
GI number: 197104135
Start: 723428
End: 724756
Strand: Direct
Name: exuT [H]
Synonym: PHZ_c0669
Alternate gene names: 197104135
Gene position: 723428-724756 (Clockwise)
Preceding gene: 197104134
Following gene: 197104136
Centisome position: 18.1
GC content: 71.78
Gene sequence:
>1329_bases ATGGCGTCCTCCTCCCCGACGCCGGCCGCGGCCGACTCCTCCGCGAGTCCGGCCGCGGCCCTGCGGCCCGCCAAGGGCGC CTGGCCCGTCCTGGCGATCCTCTGCTTCGTCTACGTGCTGAACTTCCTGGACCGGCAGCTGCTGTCGATCCTGGCCAAGC CGATCCAGGACGACCTCGGGGTCACCGACGGCCAGCTCGGGCTGATCAGCGGCCTCTACTTCGCGCTGTTCTACTGCCTG ATCTCGATCCCGGTGGGCTGGCTGGCCGACCGGACCAACCGAGTGCGGGTGCTGGCCTTCGCCTGCGGCCTGTGGAGCGC GGCCACCGTGGCCTGCGGCCTGTCGGCGAACTATCCGCAGCTCGTCCTCGCCCGGATGACGGTCGGCGTCGGCGAAGCGG GCGGGGTGCCGCCGTCCTACGCCATCATCACCGACTACTTCCCGCCCGGGCAGCGGGGCACGGCGCTCGGCCTGTTCAAC CTCGGACCGCCCATCGGCCAGGCCCTGGGCGTGGCCTTCGGCGCGGCCATCGCGGCGGCCTACAGCTGGCGGATGGCCTT CATCCTGCTGGGCGCCGTCGGCATCGTCACGGCCATCGCCGTCCTGGCGGGCGTGCGCGAGCCCGAGCGGGGCGCCCTGG ACCGTGCGGCGGGGCAGGCGCCCAAGCTGCAGGCCGGGCCGGCGAAGTTCTGGCCCACGGTGCGGATGTTCTTCTCGACG CCCGCCCTGGCCCTCGTCGCCTCGGCCAGCGCGGCGACCCAGATCATCACCTACGGCGCGGGCAACTTCACCGTCCTGTT CCTGATGCGCGAGAAGGGCATGACTCTCGAGGACGTGTCGCTCTGGTACGCCCTGGTGGTCGCCGTCGGCATGGGCGGCG GGATCTTCGTCTCGGGCCGGGTGATCGACAAGTACACCCGTCGCACGAAGGCGGCCTACGCCCTGGCGCCGGCGGTGTCG CTGGCGCTCGCGGTGCCGGCGTACCTGGCCTTCGTCTGGGCGCCGTCGTGGCCGCTGGCCCTGGCGTTCCTGCTGTTCCC GACGTTCCTGAACTACTTCTACCTGTCATCCGCCGTGGCGCTGGTGCAGGAGGAGGTGGCGCCCGAGCAGCGCGTGCTGT CCGGCGCCCTGCTGCTGCTGGTGATGAACCTGATCGGGATGGGCGTGGGCCCGACGTTCGTCGGGGCGGTGAGCGACCTC GTCCGGGCCGCCCATCCGGAGAATTCGCTTCAGATCGCGTTCTATGCGCTGGCGCCGATGTACCTCGTCGCCGTGGGGCT GTTCGTGGCGCTGGCGCGGGTGCTGAGGCGCGAGGAGACCGGCGCGTGA
Upstream 100 bases:
>100_bases CAAGATCACCTACGTGCATCCGGAGGCGTTCCTCGCCAGCCGGTACGCCGAGCAGCGTCCGCGCACCTTCGGGGTGCGGG TCGGCTACGACTTCTAGGCC
Downstream 100 bases:
>100_bases GGGCCCGGGTCGGCACGCTGCGGGGTCTGGGCCTGGCTCTGGGCCTGGCTCTGGGCCTCGCCCTGGCGCTGGGCGCCGGG CCGGCCCTGGCGCGGTCGGC
Product: major facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MASSSPTPAAADSSASPAAALRPAKGAWPVLAILCFVYVLNFLDRQLLSILAKPIQDDLGVTDGQLGLISGLYFALFYCL ISIPVGWLADRTNRVRVLAFACGLWSAATVACGLSANYPQLVLARMTVGVGEAGGVPPSYAIITDYFPPGQRGTALGLFN LGPPIGQALGVAFGAAIAAAYSWRMAFILLGAVGIVTAIAVLAGVREPERGALDRAAGQAPKLQAGPAKFWPTVRMFFST PALALVASASAATQIITYGAGNFTVLFLMREKGMTLEDVSLWYALVVAVGMGGGIFVSGRVIDKYTRRTKAAYALAPAVS LALAVPAYLAFVWAPSWPLALAFLLFPTFLNYFYLSSAVALVQEEVAPEQRVLSGALLLLVMNLIGMGVGPTFVGAVSDL VRAAHPENSLQIAFYALAPMYLVAVGLFVALARVLRREETGA
Sequences:
>Translated_442_residues MASSSPTPAAADSSASPAAALRPAKGAWPVLAILCFVYVLNFLDRQLLSILAKPIQDDLGVTDGQLGLISGLYFALFYCL ISIPVGWLADRTNRVRVLAFACGLWSAATVACGLSANYPQLVLARMTVGVGEAGGVPPSYAIITDYFPPGQRGTALGLFN LGPPIGQALGVAFGAAIAAAYSWRMAFILLGAVGIVTAIAVLAGVREPERGALDRAAGQAPKLQAGPAKFWPTVRMFFST PALALVASASAATQIITYGAGNFTVLFLMREKGMTLEDVSLWYALVVAVGMGGGIFVSGRVIDKYTRRTKAAYALAPAVS LALAVPAYLAFVWAPSWPLALAFLLFPTFLNYFYLSSAVALVQEEVAPEQRVLSGALLLLVMNLIGMGVGPTFVGAVSDL VRAAHPENSLQIAFYALAPMYLVAVGLFVALARVLRREETGA >Mature_441_residues ASSSPTPAAADSSASPAAALRPAKGAWPVLAILCFVYVLNFLDRQLLSILAKPIQDDLGVTDGQLGLISGLYFALFYCLI SIPVGWLADRTNRVRVLAFACGLWSAATVACGLSANYPQLVLARMTVGVGEAGGVPPSYAIITDYFPPGQRGTALGLFNL GPPIGQALGVAFGAAIAAAYSWRMAFILLGAVGIVTAIAVLAGVREPERGALDRAAGQAPKLQAGPAKFWPTVRMFFSTP ALALVASASAATQIITYGAGNFTVLFLMREKGMTLEDVSLWYALVVAVGMGGGIFVSGRVIDKYTRRTKAAYALAPAVSL ALAVPAYLAFVWAPSWPLALAFLLFPTFLNYFYLSSAVALVQEEVAPEQRVLSGALLLLVMNLIGMGVGPTFVGAVSDLV RAAHPENSLQIAFYALAPMYLVAVGLFVALARVLRREETGA
Specific function: Aldohexuronate transport system [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI215490096, Length=422, Percent_Identity=26.0663507109005, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI14042968, Length=422, Percent_Identity=26.0663507109005, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI194239645, Length=455, Percent_Identity=26.5934065934066, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI185136021, Length=404, Percent_Identity=27.4752475247525, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI215490102, Length=236, Percent_Identity=27.9661016949153, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI215490100, Length=392, Percent_Identity=25.2551020408163, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI215490098, Length=236, Percent_Identity=26.271186440678, Blast_Score=69, Evalue=9e-12, Organism=Escherichia coli, GI2367379, Length=228, Percent_Identity=29.3859649122807, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI87082320, Length=194, Percent_Identity=28.3505154639175, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1789152, Length=360, Percent_Identity=23.0555555555556, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1789515, Length=317, Percent_Identity=23.6593059936909, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI2367193, Length=217, Percent_Identity=27.1889400921659, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI87082231, Length=185, Percent_Identity=25.9459459459459, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17557872, Length=458, Percent_Identity=25.1091703056769, Blast_Score=117, Evalue=9e-27, Organism=Caenorhabditis elegans, GI193209775, Length=452, Percent_Identity=25.6637168141593, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17539092, Length=429, Percent_Identity=25.6410256410256, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI71992409, Length=444, Percent_Identity=23.8738738738739, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24654037, Length=414, Percent_Identity=24.6376811594203, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24654041, Length=414, Percent_Identity=24.6376811594203, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI17864456, Length=411, Percent_Identity=24.330900243309, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24654039, Length=411, Percent_Identity=24.330900243309, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24654044, Length=205, Percent_Identity=28.2926829268293, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24640209, Length=343, Percent_Identity=25.6559766763848, Blast_Score=76, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46355; Mature: 46224
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSSPTPAAADSSASPAAALRPAKGAWPVLAILCFVYVLNFLDRQLLSILAKPIQDDLG CCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VTDGQLGLISGLYFALFYCLISIPVGWLADRTNRVRVLAFACGLWSAATVACGLSANYPQ CCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCCCHH LVLARMTVGVGEAGGVPPSYAIITDYFPPGQRGTALGLFNLGPPIGQALGVAFGAAIAAA HHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH YSWRMAFILLGAVGIVTAIAVLAGVREPERGALDRAAGQAPKLQAGPAKFWPTVRMFFST HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCC PALALVASASAATQIITYGAGNFTVLFLMREKGMTLEDVSLWYALVVAVGMGGGIFVSGR CHHHHHHHHHHHHHEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECH VIDKYTRRTKAAYALAPAVSLALAVPAYLAFVWAPSWPLALAFLLFPTFLNYFYLSSAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LVQEEVAPEQRVLSGALLLLVMNLIGMGVGPTFVGAVSDLVRAAHPENSLQIAFYALAPM HHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHH YLVAVGLFVALARVLRREETGA HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ASSSPTPAAADSSASPAAALRPAKGAWPVLAILCFVYVLNFLDRQLLSILAKPIQDDLG CCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VTDGQLGLISGLYFALFYCLISIPVGWLADRTNRVRVLAFACGLWSAATVACGLSANYPQ CCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCCCHH LVLARMTVGVGEAGGVPPSYAIITDYFPPGQRGTALGLFNLGPPIGQALGVAFGAAIAAA HHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH YSWRMAFILLGAVGIVTAIAVLAGVREPERGALDRAAGQAPKLQAGPAKFWPTVRMFFST HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCC PALALVASASAATQIITYGAGNFTVLFLMREKGMTLEDVSLWYALVVAVGMGGGIFVSGR CHHHHHHHHHHHHHEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECH VIDKYTRRTKAAYALAPAVSLALAVPAYLAFVWAPSWPLALAFLLFPTFLNYFYLSSAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LVQEEVAPEQRVLSGALLLLVMNLIGMGVGPTFVGAVSDLVRAAHPENSLQIAFYALAPM HHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHH YLVAVGLFVALARVLRREETGA HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]