Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
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Accession | NC_011126 |
Length | 1,559,514 |
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The map label for this gene is 195952995
Identifier: 195952995
GI number: 195952995
Start: 554868
End: 555179
Strand: Direct
Name: 195952995
Synonym: HY04AAS1_0620
Alternate gene names: NA
Gene position: 554868-555179 (Clockwise)
Preceding gene: 195952994
Following gene: 195952996
Centisome position: 35.58
GC content: 36.86
Gene sequence:
>312_bases ATGAGTATGGAAATAGAAAACGAAGGGCCTCTTGTAGAAATAGCCGAGTTTTTAAAAGCTTTAGGGCATCCGGTAAGGTT GAGGATTGTGGAACTTCTGATAGAACACAAGCAATGTGTAAAAAATCTTGGGGATGTGCTAGGAATCCCACAACCTAATA TATCTCAGCACCTTGCCATACTTCGCTCAAAAGGTATTGTAGGATGGAAAAGAGAAGGACCTATAATATGTTATTTTATC AAGGACAAAAGAGCTATAGAAGTTTATAATTTATTGTTTAAGGAGGTTCAAGATGGCACAAAATGTTGTTGA
Upstream 100 bases:
>100_bases ACCGCGCTTTGTCCATTCTATTGGGGCCTTGTGCCCTTTATTTTTAAAAGCTTTTAAAAAACGCATAATATAAAAAAAAT TAGTTTATAATATTTTCATT
Downstream 100 bases:
>100_bases ACTTACAGACGCCAACTGGGAAAATGAGGTCATAAACTCCTCAGTTCCAGTTTTGGTTGATTTTTGGGCACCTTGGTGTG GGCCCTGCAGAATCATAGCC
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein ArsR; Transcriptional Regulator; ArsR Family Transcriptional Regulator; Transcriptional Regulator Arsr Family; Transcriptional Repressor PagR; AsrR Family Transcriptional Regulator
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MSMEIENEGPLVEIAEFLKALGHPVRLRIVELLIEHKQCVKNLGDVLGIPQPNISQHLAILRSKGIVGWKREGPIICYFI KDKRAIEVYNLLFKEVQDGTKCC
Sequences:
>Translated_103_residues MSMEIENEGPLVEIAEFLKALGHPVRLRIVELLIEHKQCVKNLGDVLGIPQPNISQHLAILRSKGIVGWKREGPIICYFI KDKRAIEVYNLLFKEVQDGTKCC >Mature_102_residues SMEIENEGPLVEIAEFLKALGHPVRLRIVELLIEHKQCVKNLGDVLGIPQPNISQHLAILRSKGIVGWKREGPIICYFIK DKRAIEVYNLLFKEVQDGTKCC
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11696; Mature: 11565
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMEIENEGPLVEIAEFLKALGHPVRLRIVELLIEHKQCVKNLGDVLGIPQPNISQHLAI CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LRSKGIVGWKREGPIICYFIKDKRAIEVYNLLFKEVQDGTKCC HHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SMEIENEGPLVEIAEFLKALGHPVRLRIVELLIEHKQCVKNLGDVLGIPQPNISQHLAI CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LRSKGIVGWKREGPIICYFIKDKRAIEVYNLLFKEVQDGTKCC HHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA