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The map label for this gene is ppdB [H]

Identifier: 194737655

GI number: 194737655

Start: 3061084

End: 3061608

Strand: Reverse

Name: ppdB [H]

Synonym: SeSA_A3162

Alternate gene names: 194737655

Gene position: 3061608-3061084 (Counterclockwise)

Preceding gene: 194737213

Following gene: 194734859

Centisome position: 65.02

GC content: 52.95

Gene sequence:

>525_bases
GTGCTGGCGATGGCGATAGGTTCCATTTTACTGCTTGGATCCGCACGATTTTTACCGGCGCTACAGCGTGAGATCTGGCA
CAACACGCGACAGTTATCGCTGGAAGATGAAATCTGGCAGCGAACCTATACCGTAGCGAAGCATCTTCAACGTGCGGGTT
ACTGTCATGGCCACTGTACTGGCGAAGGGTTACATCTTGCTGAACAGGGGCAATGCGTCATCGTTCAGTGGGACGGGAAT
AATAACGGTGTCTGGGATACCATACCGGCGAAAGAGGCCGACCAGACCGGGTTCCGTATGAAGGATAACGTTCTGGAAAC
ATTACGCGGAGCAACATCTTGCCAGGGGAAGGGATGGGAAAAAATGACCGATCCCAATACGGTACTCATCACGGCTTTTA
CCGTTGAGCGACGGGATATAACGGGATTCTCGCCAGTGCTCATGCTGCATCTGCGCGGCGCCAGCAAAGCCGAGCCTCAG
ACGGTTATTGACGCGCAATACAGCGTAACGGGATTTAATCTGTGA

Upstream 100 bases:

>100_bases
GGCGTCTGGTCGTCTCCTCCTGGGGGCGAATCAGGCTATGCGAGCGTAACGAGGCCGCCACGTGTCAATAACCACGCGGG
GGTTCTCGCTACTGGAGGTT

Downstream 100 bases:

>100_bases
ATCGGGAACGTGGCGCTTCTTCGCTAATACTGGCGCTTTTAATACTGATTCTGGGTAGTCTGCTACTGCAAGGCGTAAAT
CAGCAGCAGGCCAGCTATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MLAMAIGSILLLGSARFLPALQREIWHNTRQLSLEDEIWQRTYTVAKHLQRAGYCHGHCTGEGLHLAEQGQCVIVQWDGN
NNGVWDTIPAKEADQTGFRMKDNVLETLRGATSCQGKGWEKMTDPNTVLITAFTVERRDITGFSPVLMLHLRGASKAEPQ
TVIDAQYSVTGFNL

Sequences:

>Translated_174_residues
MLAMAIGSILLLGSARFLPALQREIWHNTRQLSLEDEIWQRTYTVAKHLQRAGYCHGHCTGEGLHLAEQGQCVIVQWDGN
NNGVWDTIPAKEADQTGFRMKDNVLETLRGATSCQGKGWEKMTDPNTVLITAFTVERRDITGFSPVLMLHLRGASKAEPQ
TVIDAQYSVTGFNL
>Mature_174_residues
MLAMAIGSILLLGSARFLPALQREIWHNTRQLSLEDEIWQRTYTVAKHLQRAGYCHGHCTGEGLHLAEQGQCVIVQWDGN
NNGVWDTIPAKEADQTGFRMKDNVLETLRGATSCQGKGWEKMTDPNTVLITAFTVERRDITGFSPVLMLHLRGASKAEPQ
TVIDAQYSVTGFNL

Specific function: Not yet known [H]

COG id: COG4795

COG function: function code U; Type II secretory pathway, component PulJ

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789189, Length=174, Percent_Identity=68.3908045977011, Blast_Score=270, Evalue=5e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012902
- InterPro:   IPR016419
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 19383; Mature: 19383

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAMAIGSILLLGSARFLPALQREIWHNTRQLSLEDEIWQRTYTVAKHLQRAGYCHGHCT
CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCC
GEGLHLAEQGQCVIVQWDGNNNGVWDTIPAKEADQTGFRMKDNVLETLRGATSCQGKGWE
CCCCEEECCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
KMTDPNTVLITAFTVERRDITGFSPVLMLHLRGASKAEPQTVIDAQYSVTGFNL
CCCCCCEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEECEEEEEECCC
>Mature Secondary Structure
MLAMAIGSILLLGSARFLPALQREIWHNTRQLSLEDEIWQRTYTVAKHLQRAGYCHGHCT
CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCC
GEGLHLAEQGQCVIVQWDGNNNGVWDTIPAKEADQTGFRMKDNVLETLRGATSCQGKGWE
CCCCEEECCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
KMTDPNTVLITAFTVERRDITGFSPVLMLHLRGASKAEPQTVIDAQYSVTGFNL
CCCCCCEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEECEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3520484; 9278503; 7934814 [H]