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The map label for this gene is csgC [C]

Identifier: 194737637

GI number: 194737637

Start: 1190455

End: 1190781

Strand: Direct

Name: csgC [C]

Synonym: SeSA_A1211

Alternate gene names: 194737637

Gene position: 1190455-1190781 (Clockwise)

Preceding gene: 194736345

Following gene: 194734505

Centisome position: 25.28

GC content: 43.73

Gene sequence:

>327_bases
ATGCATAATTTATTGCTCCTTGCCGCACTTTCAAATCAGATTACGTTTACCACAACTCAGCAAGGCGATATTTACACGGT
GATCCCTCAGGTAACATTAAACGAACCCTGCGTCTGTCAGGTGCAAATTCTCTCTGTGCGCGACGGTGTCGGGGGACAAA
GCCATACACAGCAAAAACAAACGCTATCTTTACCTGCTAATCAACCGATTGAGTTGTCTCGTCTTAGTGTAAATATATCT
TCAGAGGACTCGGTTAAAATTATTGTTACTGTTTCGGACGGACAATCACTGCATTTATCACAACAATGGCCGCCTTCTGC
ACAGTAG

Upstream 100 bases:

>100_bases
GTTGGTTTTGGCAACAACGCCACGGCTAACCAGTATTAATTTAGCGTCTGCGCTAATAAAAAAACAGGGCTTACGCCCTG
TTTTTTTTCGGGAGGAAATT

Downstream 100 bases:

>100_bases
TTTTTGATGGTGGCGGAAATGGATTGGCTGACCTGGGTATTAAAGAGGCGATAAAAGCGTCTCATCGTCTCGGCATGTCG
CTAAAAGGTAACGCCGAACC

Product: putative autoagglutination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MHNLLLLAALSNQITFTTTQQGDIYTVIPQVTLNEPCVCQVQILSVRDGVGGQSHTQQKQTLSLPANQPIELSRLSVNIS
SEDSVKIIVTVSDGQSLHLSQQWPPSAQ

Sequences:

>Translated_108_residues
MHNLLLLAALSNQITFTTTQQGDIYTVIPQVTLNEPCVCQVQILSVRDGVGGQSHTQQKQTLSLPANQPIELSRLSVNIS
SEDSVKIIVTVSDGQSLHLSQQWPPSAQ
>Mature_108_residues
MHNLLLLAALSNQITFTTTQQGDIYTVIPQVTLNEPCVCQVQILSVRDGVGGQSHTQQKQTLSLPANQPIELSRLSVNIS
SEDSVKIIVTVSDGQSLHLSQQWPPSAQ

Specific function: Plays a role in the extracellular assembly of CsgA into thin aggregative fimbriae (Tafi) fibers. Assembly may also require CsgE. Tafi are thought to be assembled via an extracellular nucleation-precipitation (ENP) pathway, and possibly also via an intrace

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsgC/AgfC family [H]

Homologues:

Organism=Escherichia coli, GI1787280, Length=96, Percent_Identity=71.875, Blast_Score=150, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014491 [H]

Pfam domain/function: PF10610 Tafi-CsgC [H]

EC number: NA

Molecular weight: Translated: 11734; Mature: 11734

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNLLLLAALSNQITFTTTQQGDIYTVIPQVTLNEPCVCQVQILSVRDGVGGQSHTQQKQ
CCCEEEEEECCCCEEEEEECCCCEEEEECCEECCCCCEEEEEEEEEECCCCCCCCCCCCE
TLSLPANQPIELSRLSVNISSEDSVKIIVTVSDGQSLHLSQQWPPSAQ
EEECCCCCCEEEEEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCC
>Mature Secondary Structure
MHNLLLLAALSNQITFTTTQQGDIYTVIPQVTLNEPCVCQVQILSVRDGVGGQSHTQQKQ
CCCEEEEEECCCCEEEEEECCCCEEEEECCEECCCCCEEEEEEEEEECCCCCCCCCCCCE
TLSLPANQPIELSRLSVNISSEDSVKIIVTVSDGQSLHLSQQWPPSAQ
EEECCCCCCEEEEEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA