Click here to switch to the map view.

The map label for this gene is fucO [H]

Identifier: 194737275

GI number: 194737275

Start: 3028780

End: 3029928

Strand: Reverse

Name: fucO [H]

Synonym: SeSA_A3133

Alternate gene names: 194737275

Gene position: 3029928-3028780 (Counterclockwise)

Preceding gene: 194734317

Following gene: 194736136

Centisome position: 64.34

GC content: 55.61

Gene sequence:

>1149_bases
ATGGCGAACAGAATGATTCTGAATGAAACGGCATGGTTTGGCCGGGGAGCGGTGGACGCATTAACCGATGAGGTGACGCG
CCGCGGTTATCATAAAGCGCTGATTGTTACGGATAAAACGCTGGTGCAATGCGGTGTGGTCGATAAAGTGACAAGCAGAA
TGGATGCCGCAGGGCTGGCGTGGGAAATCTATGCGGGCGTGATCCCTAATCCTACGATTTCCGTTGTCCAGGAAGGGCTT
AAGGTCTTTACCCAAAGCGGCGCGGACTATCTCATCGCCATTGGCGGCGGTTCTCCGCAGGATACCTGCAAAGCGATCGG
TATTATCAGTAACAATCCGGAATTTGCCGATGTGCGCAGTCTGGAAGGGCTATCGCCGACCCGTAAACCCAGCGTGCCGA
TTATGGCGATCCCGACAACGGCGGGAACCGCGGCGGAAGTCACTATCAATTATGTGATTACCGATGAAGAGAAACGGCGC
AAATTCGTTTGTGTCGATCCACATGATATTCCGCAGGCGGCATTTATCGATGCCGATATGATGGACGGTATGCCGCCCGC
GCTGAAAGCGGCAACGGGCGTGGATGCGCTAACCCATGCTATTGAAGGCTATATTACCCGGGCCGCATGGGCGCTGACGG
ATGCATTACATATCAAAGCCATTGAGATTATTGCTGGCGCGCTACGCGGCGCCGTAGCCGGAGAAAAAGAGGCCGGTGAG
GCGATGGCGCTGGGGCAATACGTTGCCGGGATGGGGTTTTCCAATGTGGGGCTGGGACTGGTGCATGGGATGGCGCATCC
GTTGGGCGCGTTTTACAACACGCCGCACGGCGTCGCGAATGCTATTTTGCTTCCGCATGTGATGCGTTTCAATGCCGGGT
CTACCAACGAGAAATTCCGTGATATCGCCCGGGCGATGGGGGTGAAGGTAGAAGGATTGAGTCTTGAAGAGGCGCGTAAT
GCCGCAGTGGAAGCCGTATTTGCGTTAAATCGCGATGTGGGAATTCCGCTGCATTTGCGTGATGTCGGCGTTCGAAAAGA
GGATATCCCGGCGCTGGCGCAGGCGGCGTTCGATGATGTCTGTACGGGCGGCAATCCGCGTGAAGCGAGTCTGGCGGACA
TTGTCGAACTGTATCATATCGCCTGGTAA

Upstream 100 bases:

>100_bases
GATCCGGTACCGGTACTGGATGACGGGGCGATCGCTATCGTACTGGAGAAATTTAAAACTTACGGATTACGTATTGAAGA
GTGATGTCAGGAGACAGGCG

Downstream 100 bases:

>100_bases
TTTTGCCGGATGGCGCTGCGCTTATCCGCTCTACATTTCGTGCAGTCCTGTAGGCAGGATAAGGCGTTCACGCCGCCATC
CGGCAACAAAACTACCGCGC

Product: L-1,2-propanediol oxidoreductase

Products: NA

Alternate protein names: Propanediol oxidoreductase [H]

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MANRMILNETAWFGRGAVDALTDEVTRRGYHKALIVTDKTLVQCGVVDKVTSRMDAAGLAWEIYAGVIPNPTISVVQEGL
KVFTQSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTRKPSVPIMAIPTTAGTAAEVTINYVITDEEKRR
KFVCVDPHDIPQAAFIDADMMDGMPPALKAATGVDALTHAIEGYITRAAWALTDALHIKAIEIIAGALRGAVAGEKEAGE
AMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRFNAGSTNEKFRDIARAMGVKVEGLSLEEARN
AAVEAVFALNRDVGIPLHLRDVGVRKEDIPALAQAAFDDVCTGGNPREASLADIVELYHIAW

Sequences:

>Translated_382_residues
MANRMILNETAWFGRGAVDALTDEVTRRGYHKALIVTDKTLVQCGVVDKVTSRMDAAGLAWEIYAGVIPNPTISVVQEGL
KVFTQSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTRKPSVPIMAIPTTAGTAAEVTINYVITDEEKRR
KFVCVDPHDIPQAAFIDADMMDGMPPALKAATGVDALTHAIEGYITRAAWALTDALHIKAIEIIAGALRGAVAGEKEAGE
AMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRFNAGSTNEKFRDIARAMGVKVEGLSLEEARN
AAVEAVFALNRDVGIPLHLRDVGVRKEDIPALAQAAFDDVCTGGNPREASLADIVELYHIAW
>Mature_381_residues
ANRMILNETAWFGRGAVDALTDEVTRRGYHKALIVTDKTLVQCGVVDKVTSRMDAAGLAWEIYAGVIPNPTISVVQEGLK
VFTQSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTRKPSVPIMAIPTTAGTAAEVTINYVITDEEKRRK
FVCVDPHDIPQAAFIDADMMDGMPPALKAATGVDALTHAIEGYITRAAWALTDALHIKAIEIIAGALRGAVAGEKEAGEA
MALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRFNAGSTNEKFRDIARAMGVKVEGLSLEEARNA
AVEAVFALNRDVGIPLHLRDVGVRKEDIPALAQAAFDDVCTGGNPREASLADIVELYHIAW

Specific function: Fucose metabolism; fourth step. [C]

COG id: COG1454

COG function: function code C; Alcohol dehydrogenase, class IV

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI133922590, Length=406, Percent_Identity=28.0788177339901, Blast_Score=114, Evalue=1e-25,
Organism=Escherichia coli, GI1789163, Length=382, Percent_Identity=91.0994764397906, Blast_Score=712, Evalue=0.0,
Organism=Escherichia coli, GI48994951, Length=369, Percent_Identity=43.9024390243902, Blast_Score=292, Evalue=2e-80,
Organism=Escherichia coli, GI87082107, Length=369, Percent_Identity=39.2953929539295, Blast_Score=225, Evalue=3e-60,
Organism=Escherichia coli, GI1787493, Length=402, Percent_Identity=34.0796019900498, Blast_Score=212, Evalue=3e-56,
Organism=Escherichia coli, GI1789386, Length=356, Percent_Identity=25.8426966292135, Blast_Score=92, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17537053, Length=415, Percent_Identity=24.578313253012, Blast_Score=118, Evalue=4e-27,
Organism=Saccharomyces cerevisiae, GI6321181, Length=376, Percent_Identity=38.2978723404255, Blast_Score=261, Evalue=1e-70,
Organism=Drosophila melanogaster, GI24657991, Length=409, Percent_Identity=25.6723716381418, Blast_Score=97, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001670
- InterPro:   IPR018211
- InterPro:   IPR013460 [H]

Pfam domain/function: PF00465 Fe-ADH [H]

EC number: =1.1.1.77 [H]

Molecular weight: Translated: 40521; Mature: 40390

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00913 ADH_IRON_1 ; PS00060 ADH_IRON_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANRMILNETAWFGRGAVDALTDEVTRRGYHKALIVTDKTLVQCGVVDKVTSRMDAAGLA
CCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHCCHHHHHHHHHHCCCE
WEIYAGVIPNPTISVVQEGLKVFTQSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRS
EEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHEEEEECCCCCCHHHHH
LEGLSPTRKPSVPIMAIPTTAGTAAEVTINYVITDEEKRRKFVCVDPHDIPQAAFIDADM
CCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEEECHHHCCCEEEECCCCCCCHHEECCHH
MDGMPPALKAATGVDALTHAIEGYITRAAWALTDALHIKAIEIIAGALRGAVAGEKEAGE
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRFNAGSTNEKFR
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHH
DIARAMGVKVEGLSLEEARNAAVEAVFALNRDVGIPLHLRDVGVRKEDIPALAQAAFDDV
HHHHHHCCEEECCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH
CTGGNPREASLADIVELYHIAW
HCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
ANRMILNETAWFGRGAVDALTDEVTRRGYHKALIVTDKTLVQCGVVDKVTSRMDAAGLA
CCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHCCHHHHHHHHHHCCCE
WEIYAGVIPNPTISVVQEGLKVFTQSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRS
EEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHEEEEECCCCCCHHHHH
LEGLSPTRKPSVPIMAIPTTAGTAAEVTINYVITDEEKRRKFVCVDPHDIPQAAFIDADM
CCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEEECHHHCCCEEEECCCCCCCHHEECCHH
MDGMPPALKAATGVDALTHAIEGYITRAAWALTDALHIKAIEIIAGALRGAVAGEKEAGE
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRFNAGSTNEKFR
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHH
DIARAMGVKVEGLSLEEARNAAVEAVFALNRDVGIPLHLRDVGVRKEDIPALAQAAFDDV
HHHHHHCCEEECCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH
CTGGNPREASLADIVELYHIAW
HCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]