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The map label for this gene is yjgJ [H]

Identifier: 194737106

GI number: 194737106

Start: 1740504

End: 1741094

Strand: Reverse

Name: yjgJ [H]

Synonym: SeSA_A1799

Alternate gene names: 194737106

Gene position: 1741094-1740504 (Counterclockwise)

Preceding gene: 194735923

Following gene: 194736205

Centisome position: 36.97

GC content: 56.18

Gene sequence:

>591_bases
ATGACTACAAAACATAGTCGAACGCCGGGTCGTCCTCGCCAGTTCGATCCGGAGCAAGCCATTGAAACCGCTCAACACTT
ATTTCATTCGCGCGGCTACGACGCGGTGAGCGTAGCGGATCTGACAAAAGCGTTCGGGATCAATCCTCCCAGTTTCTATG
CGGCGTTTGGCAGCAAGCTGGGGCTGTATACCCGCGTATTAAAGCGTTACAGGATGACCGACGCGATTCCGCTCGGGGCG
CTTCTGCGTCACGATCGCCCGACCGCGAAGTGCCTTATTGATGTGCTGATGGAAGCGGCAAGACGTTACGTTGCCGATCC
TGATGCCACTGGATGTCTGGTTCTGGAGGGCGCTCATTGTAACGATAAACCGGCACGAGAGGCCGCCTGCGAGTTTTACA
TCGCTGCTGAAAACCTGATTCGCACTTATGTCGCCATGCGGTATCCGCAAGAGGCTGACCGGATGACTGACTTTATGGGG
ACGCTAATGGCGGGGCTTTCCGCCAAGGCGCGAGCGGGGTATAGCCTGGAGCGTCTTCAGGAGAGCGTACTTCTGGCTGG
AGATGTGCTGGAGCGATTACTACCGGATTAA

Upstream 100 bases:

>100_bases
GATTTGTTGCGAAATAGCATCATCAGGATGTCCTTTATGATATTGTAGTAGCCACTACAATATGCGTAATGAAATCATGC
CGTCAAGGAGTTATGTAGTA

Downstream 100 bases:

>100_bases
CGCAGCGCATCAAAAAACCTGAGCCAATCAGTACGGGCAAACAGGGAGCAATAGCCCTAATCATCCATCTTGCCGTTGCG
GTATTCGGTAAAGTACATCA

Product: transcriptional regulator, TetR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTTKHSRTPGRPRQFDPEQAIETAQHLFHSRGYDAVSVADLTKAFGINPPSFYAAFGSKLGLYTRVLKRYRMTDAIPLGA
LLRHDRPTAKCLIDVLMEAARRYVADPDATGCLVLEGAHCNDKPAREAACEFYIAAENLIRTYVAMRYPQEADRMTDFMG
TLMAGLSAKARAGYSLERLQESVLLAGDVLERLLPD

Sequences:

>Translated_196_residues
MTTKHSRTPGRPRQFDPEQAIETAQHLFHSRGYDAVSVADLTKAFGINPPSFYAAFGSKLGLYTRVLKRYRMTDAIPLGA
LLRHDRPTAKCLIDVLMEAARRYVADPDATGCLVLEGAHCNDKPAREAACEFYIAAENLIRTYVAMRYPQEADRMTDFMG
TLMAGLSAKARAGYSLERLQESVLLAGDVLERLLPD
>Mature_195_residues
TTKHSRTPGRPRQFDPEQAIETAQHLFHSRGYDAVSVADLTKAFGINPPSFYAAFGSKLGLYTRVLKRYRMTDAIPLGAL
LRHDRPTAKCLIDVLMEAARRYVADPDATGCLVLEGAHCNDKPAREAACEFYIAAENLIRTYVAMRYPQEADRMTDFMGT
LMAGLSAKARAGYSLERLQESVLLAGDVLERLLPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082397, Length=196, Percent_Identity=55.1020408163265, Blast_Score=227, Evalue=3e-61,
Organism=Escherichia coli, GI87081833, Length=207, Percent_Identity=29.4685990338164, Blast_Score=77, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21784; Mature: 21653

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKHSRTPGRPRQFDPEQAIETAQHLFHSRGYDAVSVADLTKAFGINPPSFYAAFGSKL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
GLYTRVLKRYRMTDAIPLGALLRHDRPTAKCLIDVLMEAARRYVADPDATGCLVLEGAHC
HHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
NDKPAREAACEFYIAAENLIRTYVAMRYPQEADRMTDFMGTLMAGLSAKARAGYSLERLQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHH
ESVLLAGDVLERLLPD
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTKHSRTPGRPRQFDPEQAIETAQHLFHSRGYDAVSVADLTKAFGINPPSFYAAFGSKL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
GLYTRVLKRYRMTDAIPLGALLRHDRPTAKCLIDVLMEAARRYVADPDATGCLVLEGAHC
HHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
NDKPAREAACEFYIAAENLIRTYVAMRYPQEADRMTDFMGTLMAGLSAKARAGYSLERLQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHH
ESVLLAGDVLERLLPD
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]