Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is 194736983
Identifier: 194736983
GI number: 194736983
Start: 1861077
End: 1862342
Strand: Reverse
Name: 194736983
Synonym: SeSA_A1926
Alternate gene names: NA
Gene position: 1862342-1861077 (Counterclockwise)
Preceding gene: 194736556
Following gene: 194736703
Centisome position: 39.55
GC content: 37.76
Gene sequence:
>1266_bases ATGAAAAATAACATCAGATTTGACTTGTCCGATTATTTGATTCATTTTTTTCGGGACGTTGATTTAGAGACCGGTAGCCA TATTTATTTCCCTGAACACTGTGGTTTTAATAATCAGCACCACGCATGTTTCATTGATGCTAAATATTTACTTCGATTAT CTTTACGCAGTCATAAAATTTTCTCGTCCTGGTCATACCGAAATGGGCAACGAACCGTATATGGTGACTCCCCGGTGGTA TGCTTTACAGATATGCCGATTGCAGCTTATTTAGAAACTGGTGTTCGCCGATTAGAACGAAAAGAAAAAATCGGTTTATA TGCAATCGTTTTACCTAAAGAGCAAATGTTTAATTATGGGGCAAGGCCAGTCATATATGGGTTGGATGAGCATAACAATG CTAGATGCTCGCAAGGCAGAAACGGGGAACGTATTCTTGATGAAACTGCTCTTCCTTTGATTGAACAATATAGATATGTT ACTTATGTTCCAGGTAAGATTGACTGGACGCATGAACGCGAATGGCGATGGCCATATCGTGGCGATATTAAAAAATTCCT TAATCATATTAAAGAGTATGGTATTCCGGAAAACATTGAAAGCACCCCAGGGTTTGATTTTAAATCAAGCGAAATAAGTG GTGCGGGAATAATCGTCCCATTTGTAGAAGATATTCCTACCGTAGCTCACGATATTTTAACTTTAATTGACCGGGGTATC ATTGGAAGAAATACTTTCAAATTCATTATAGCTGTAGAGAGTTTACAATCATGGACCCAGCTCTCGGAACCGGGCGCGTT ACTGTCCTGTATTAATGATAATACATTTGAATTTGAATCTTTTTTTGATTTATCTGCATCTAAAGTAAAAAATTATGCTG ATTCTATCAATGATTATGTAAATGAATTATATTCAAAAAAAGATTTTTTAAATGATAGTTATGCAATGGAATTTGGAAAT GCCTGGGTCTGGATTCATGATAACCAATCCCAGGTGGTACGGGCGTTACTGCAGGCTGGAATGATCAAGGTTAATAAAGA AGGGCGGTACTTATTAGATGTTAATTTGGCTTCTGTTGATTGGCCATTAAGAAGAAAAGAAGCTTTCGCAAGTCATATTG CGGGATGGCTCAAACATCGTTTTGATATCGAAGCGGGAAGGTATTCCGTTCAGGGAAAAGATCATTATGATGCGATCCCA AGTTATGAGACGCCGCTAAAGGATCAGCATCCTTTTTATAATCATACAGTGAATGTCGACTGGTAA
Upstream 100 bases:
>100_bases CATCGTTAAAAGAAGCATACTTCGTGAAGATTTTTATATAAAATAGTGATGCTGGTTTTAAAGGAATGCAAAAAAGAGAC CGTTTGAAAGAGGGCGTCCC
Downstream 100 bases:
>100_bases TTAAGAAAAGAACTTACCCTGTTAGCTCTGCGTTAATTTAACGCATTGATTTTACAGATGAATGAAAGACATTAGAGGCT ATTATAAAATAGACTGTAAT
Product: putative cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MKNNIRFDLSDYLIHFFRDVDLETGSHIYFPEHCGFNNQHHACFIDAKYLLRLSLRSHKIFSSWSYRNGQRTVYGDSPVV CFTDMPIAAYLETGVRRLERKEKIGLYAIVLPKEQMFNYGARPVIYGLDEHNNARCSQGRNGERILDETALPLIEQYRYV TYVPGKIDWTHEREWRWPYRGDIKKFLNHIKEYGIPENIESTPGFDFKSSEISGAGIIVPFVEDIPTVAHDILTLIDRGI IGRNTFKFIIAVESLQSWTQLSEPGALLSCINDNTFEFESFFDLSASKVKNYADSINDYVNELYSKKDFLNDSYAMEFGN AWVWIHDNQSQVVRALLQAGMIKVNKEGRYLLDVNLASVDWPLRRKEAFASHIAGWLKHRFDIEAGRYSVQGKDHYDAIP SYETPLKDQHPFYNHTVNVDW
Sequences:
>Translated_421_residues MKNNIRFDLSDYLIHFFRDVDLETGSHIYFPEHCGFNNQHHACFIDAKYLLRLSLRSHKIFSSWSYRNGQRTVYGDSPVV CFTDMPIAAYLETGVRRLERKEKIGLYAIVLPKEQMFNYGARPVIYGLDEHNNARCSQGRNGERILDETALPLIEQYRYV TYVPGKIDWTHEREWRWPYRGDIKKFLNHIKEYGIPENIESTPGFDFKSSEISGAGIIVPFVEDIPTVAHDILTLIDRGI IGRNTFKFIIAVESLQSWTQLSEPGALLSCINDNTFEFESFFDLSASKVKNYADSINDYVNELYSKKDFLNDSYAMEFGN AWVWIHDNQSQVVRALLQAGMIKVNKEGRYLLDVNLASVDWPLRRKEAFASHIAGWLKHRFDIEAGRYSVQGKDHYDAIP SYETPLKDQHPFYNHTVNVDW >Mature_421_residues MKNNIRFDLSDYLIHFFRDVDLETGSHIYFPEHCGFNNQHHACFIDAKYLLRLSLRSHKIFSSWSYRNGQRTVYGDSPVV CFTDMPIAAYLETGVRRLERKEKIGLYAIVLPKEQMFNYGARPVIYGLDEHNNARCSQGRNGERILDETALPLIEQYRYV TYVPGKIDWTHEREWRWPYRGDIKKFLNHIKEYGIPENIESTPGFDFKSSEISGAGIIVPFVEDIPTVAHDILTLIDRGI IGRNTFKFIIAVESLQSWTQLSEPGALLSCINDNTFEFESFFDLSASKVKNYADSINDYVNELYSKKDFLNDSYAMEFGN AWVWIHDNQSQVVRALLQAGMIKVNKEGRYLLDVNLASVDWPLRRKEAFASHIAGWLKHRFDIEAGRYSVQGKDHYDAIP SYETPLKDQHPFYNHTVNVDW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48942; Mature: 48942
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNIRFDLSDYLIHFFRDVDLETGSHIYFPEHCGFNNQHHACFIDAKYLLRLSLRSHKI CCCCEEECHHHHHHHHHHHCCCCCCCEEECCHHCCCCCCCCEEEEEHHHHHHHHHHHHHH FSSWSYRNGQRTVYGDSPVVCFTDMPIAAYLETGVRRLERKEKIGLYAIVLPKEQMFNYG HHCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCC ARPVIYGLDEHNNARCSQGRNGERILDETALPLIEQYRYVTYVPGKIDWTHEREWRWPYR CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCH GDIKKFLNHIKEYGIPENIESTPGFDFKSSEISGAGIIVPFVEDIPTVAHDILTLIDRGI HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCC IGRNTFKFIIAVESLQSWTQLSEPGALLSCINDNTFEFESFFDLSASKVKNYADSINDYV CCCCCEEEEEEHHHHHHHHHHCCCCCEEEECCCCCEEHHHHHCCCHHHHHHHHHHHHHHH NELYSKKDFLNDSYAMEFGNAWVWIHDNQSQVVRALLQAGMIKVNKEGRYLLDVNLASVD HHHHHHHHHCCCCCEEEECCEEEEEECCHHHHHHHHHHCCCEEECCCCCEEEEEEEECCC WPLRRKEAFASHIAGWLKHRFDIEAGRYSVQGKDHYDAIPSYETPLKDQHPFYNHTVNVD CCHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEC W C >Mature Secondary Structure MKNNIRFDLSDYLIHFFRDVDLETGSHIYFPEHCGFNNQHHACFIDAKYLLRLSLRSHKI CCCCEEECHHHHHHHHHHHCCCCCCCEEECCHHCCCCCCCCEEEEEHHHHHHHHHHHHHH FSSWSYRNGQRTVYGDSPVVCFTDMPIAAYLETGVRRLERKEKIGLYAIVLPKEQMFNYG HHCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCC ARPVIYGLDEHNNARCSQGRNGERILDETALPLIEQYRYVTYVPGKIDWTHEREWRWPYR CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCH GDIKKFLNHIKEYGIPENIESTPGFDFKSSEISGAGIIVPFVEDIPTVAHDILTLIDRGI HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCC IGRNTFKFIIAVESLQSWTQLSEPGALLSCINDNTFEFESFFDLSASKVKNYADSINDYV CCCCCEEEEEEHHHHHHHHHHCCCCCEEEECCCCCEEHHHHHCCCHHHHHHHHHHHHHHH NELYSKKDFLNDSYAMEFGNAWVWIHDNQSQVVRALLQAGMIKVNKEGRYLLDVNLASVD HHHHHHHHHCCCCCEEEECCEEEEEECCHHHHHHHHHHCCCEEECCCCCEEEEEEEECCC WPLRRKEAFASHIAGWLKHRFDIEAGRYSVQGKDHYDAIPSYETPLKDQHPFYNHTVNVD CCHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEC W C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA