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The map label for this gene is ppdC [H]

Identifier: 194736858

GI number: 194736858

Start: 3060375

End: 3060623

Strand: Reverse

Name: ppdC [H]

Synonym: SeSA_A3160

Alternate gene names: 194736858

Gene position: 3060623-3060375 (Counterclockwise)

Preceding gene: 194734859

Following gene: 194737570

Centisome position: 64.99

GC content: 55.02

Gene sequence:

>249_bases
ATGATCGTCACCGCGCTGTCAGGCTATCAGCGGGTATTAATGCACAGTTTTGCATTACGACACCAGTATCTCCAGATCTG
GCGGCAGGCGTGGCAGCAAACGGCGCTGTATCCATTTTCGCCTGCTGAAGGCTGGAAGGCCAACCGGATGCAGACAACGC
AATCGGGATGTGTCAGCATCAGCGTCACGATGGTTTCACCCTCTGGCAGGCAGGGGCAGATGACGCGCTTGCATTGTCCA
AATCGTTAA

Upstream 100 bases:

>100_bases
ATTTTTGTCCGTTAAAAGAGGTGGCGTTATGTCGCATCCCCTGAATTTACAACGCGGGTTTAGCCTCCCGGAAGTTTTAG
TGGCGATGGTTCTAATAGTA

Downstream 100 bases:

>100_bases
TCGTCAGGAGTAATTATGTTAAGGGTCTACCACTCCAATCGTCTGGATGTGCTGGAAGCGTTGATGGAGTTCATCGTCGA
ACGCGAGCGGCTGGATGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MIVTALSGYQRVLMHSFALRHQYLQIWRQAWQQTALYPFSPAEGWKANRMQTTQSGCVSISVTMVSPSGRQGQMTRLHCP
NR

Sequences:

>Translated_82_residues
MIVTALSGYQRVLMHSFALRHQYLQIWRQAWQQTALYPFSPAEGWKANRMQTTQSGCVSISVTMVSPSGRQGQMTRLHCP
NR
>Mature_82_residues
MIVTALSGYQRVLMHSFALRHQYLQIWRQAWQQTALYPFSPAEGWKANRMQTTQSGCVSISVTMVSPSGRQGQMTRLHCP
NR

Specific function: Not yet known [H]

COG id: COG4967

COG function: function code NU; Tfp pilus assembly protein PilV

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789187, Length=82, Percent_Identity=69.5121951219512, Blast_Score=125, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022204
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF12528 DUF3728 [H]

EC number: NA

Molecular weight: Translated: 9412; Mature: 9412

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVTALSGYQRVLMHSFALRHQYLQIWRQAWQQTALYPFSPAEGWKANRMQTTQSGCVSI
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE
SVTMVSPSGRQGQMTRLHCPNR
EEEEECCCCCCCCEEEECCCCC
>Mature Secondary Structure
MIVTALSGYQRVLMHSFALRHQYLQIWRQAWQQTALYPFSPAEGWKANRMQTTQSGCVSI
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE
SVTMVSPSGRQGQMTRLHCPNR
EEEEECCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3520484; 9278503; 7934814 [H]