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The map label for this gene is yciC [C]

Identifier: 194736608

GI number: 194736608

Start: 1806677

End: 1807420

Strand: Direct

Name: yciC [C]

Synonym: SeSA_A1867

Alternate gene names: 194736608

Gene position: 1806677-1807420 (Clockwise)

Preceding gene: 194737269

Following gene: 194738214

Centisome position: 38.37

GC content: 51.08

Gene sequence:

>744_bases
ATGTCTATCACGGCGAAGTCCGTTTACCGTGACGCCGGAAATTTTTTCCGAAATCAATTTATTACTATCTTGCTGGTTTC
GTTGCTGTGCGCATTTATCACGGTGGTCTTAGGTCATGCCTTTTCACCCAGCGATGCGCAAATCGCGCAACTCAGTGAAG
GAGAACATCTGGCAGGCAGCGCTGGCCTGTTTGAGCTGGTACAAAATATGACGCCGGAGCAGCAGCAGATCCTGTTGCGC
GCCTCTGCCGCCTCGACGTTTTCCGGGCTTATCGGCAATGCTATTCTGGCTGGCGGTACCATCCTGATGATTCAGTTAGT
TTCAGCGGGACATCGGGTTAGCGCGCTGCGCGCTATCGGCGCCAGCGCCCCTGCATTGCCTAAACTGTTTATTCTCATTT
TTCTGACTACCCTGTTAGTGCAAATCGGTATAATGCTGATTGTCGTTCCGGGGATTATTATGGCCATTGTGCTGGCGCTT
GCGCCAGTGATGTTGGTTGAAGAGAAAATGGGCGTGTTTGCCGCAATGCGCAGCAGTATGCGTTTAGCCTGGGCTAACAT
GAGACTGGTCGCGCCTGCGGTGATAGGCTGGTTACTGGCTAAAACATTGCTATTGCTGTTCGCGCCCAGCTTCGCTGTAC
TGACCCCAAATGTAGGCGCTGTACTGGCGAATACGTTGAGCAATCTGATTTCCGCAGTATTGCTTATCTACTTATTCCGC
CTGTATATGTTGATTCGCCAATAA

Upstream 100 bases:

>100_bases
AAAGATATGCTTTTCCATACAACTGCTGATGCTGCCACTGTAGAGTTATCCAGGGTACAATTGCCCGCAAATTAACACCT
GCAAAACTCAAGGAGAGTGC

Downstream 100 bases:

>100_bases
TCCGCAATGCGCCGTTACGCGGCGCATTCGACGCTCGTTGATGATGGAATCGAAGAATGAAGCAGTTTCTGGATTTTTTA
CCGCTGGTTGTCTTTTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSITAKSVYRDAGNFFRNQFITILLVSLLCAFITVVLGHAFSPSDAQIAQLSEGEHLAGSAGLFELVQNMTPEQQQILLR
ASAASTFSGLIGNAILAGGTILMIQLVSAGHRVSALRAIGASAPALPKLFILIFLTTLLVQIGIMLIVVPGIIMAIVLAL
APVMLVEEKMGVFAAMRSSMRLAWANMRLVAPAVIGWLLAKTLLLLFAPSFAVLTPNVGAVLANTLSNLISAVLLIYLFR
LYMLIRQ

Sequences:

>Translated_247_residues
MSITAKSVYRDAGNFFRNQFITILLVSLLCAFITVVLGHAFSPSDAQIAQLSEGEHLAGSAGLFELVQNMTPEQQQILLR
ASAASTFSGLIGNAILAGGTILMIQLVSAGHRVSALRAIGASAPALPKLFILIFLTTLLVQIGIMLIVVPGIIMAIVLAL
APVMLVEEKMGVFAAMRSSMRLAWANMRLVAPAVIGWLLAKTLLLLFAPSFAVLTPNVGAVLANTLSNLISAVLLIYLFR
LYMLIRQ
>Mature_246_residues
SITAKSVYRDAGNFFRNQFITILLVSLLCAFITVVLGHAFSPSDAQIAQLSEGEHLAGSAGLFELVQNMTPEQQQILLRA
SAASTFSGLIGNAILAGGTILMIQLVSAGHRVSALRAIGASAPALPKLFILIFLTTLLVQIGIMLIVVPGIIMAIVLALA
PVMLVEEKMGVFAAMRSSMRLAWANMRLVAPAVIGWLLAKTLLLLFAPSFAVLTPNVGAVLANTLSNLISAVLLIYLFRL
YMLIRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0259 family [H]

Homologues:

Organism=Escherichia coli, GI1787508, Length=247, Percent_Identity=87.0445344129555, Blast_Score=410, Evalue=1e-116,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009627 [H]

Pfam domain/function: PF06790 UPF0259 [H]

EC number: NA

Molecular weight: Translated: 26359; Mature: 26228

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITAKSVYRDAGNFFRNQFITILLVSLLCAFITVVLGHAFSPSDAQIAQLSEGEHLAGS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCH
AGLFELVQNMTPEQQQILLRASAASTFSGLIGNAILAGGTILMIQLVSAGHRVSALRAIG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHC
ASAPALPKLFILIFLTTLLVQIGIMLIVVPGIIMAIVLALAPVMLVEEKMGVFAAMRSSM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLAWANMRLVAPAVIGWLLAKTLLLLFAPSFAVLTPNVGAVLANTLSNLISAVLLIYLFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LYMLIRQ
HHHHHCC
>Mature Secondary Structure 
SITAKSVYRDAGNFFRNQFITILLVSLLCAFITVVLGHAFSPSDAQIAQLSEGEHLAGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCH
AGLFELVQNMTPEQQQILLRASAASTFSGLIGNAILAGGTILMIQLVSAGHRVSALRAIG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHC
ASAPALPKLFILIFLTTLLVQIGIMLIVVPGIIMAIVLALAPVMLVEEKMGVFAAMRSSM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLAWANMRLVAPAVIGWLLAKTLLLLFAPSFAVLTPNVGAVLANTLSNLISAVLLIYLFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LYMLIRQ
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA