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The map label for this gene is tse [H]

Identifier: 194736435

GI number: 194736435

Start: 3219766

End: 3221409

Strand: Reverse

Name: tse [H]

Synonym: SeSA_A3335

Alternate gene names: 194736435

Gene position: 3221409-3219766 (Counterclockwise)

Preceding gene: 194737412

Following gene: 194736900

Centisome position: 68.41

GC content: 57.0

Gene sequence:

>1644_bases
ATGCGTTTGCTGCAAAACTTTACTATTCGTATGGTCATGCTGACGATACTGGGACTTTTTTGTCTACTCTGGTCGGGGGT
GGGGTTATACAGCGTCCATGCTTTATCCGAAGTTTCGGAAGGAAATGATATTGACCGGCATCTTGTGCGGCAAATGACGG
TGCTAAGCCAGGGTAACGATCAATATTTCCGCTTTGTTACCCGCCTTAGCCGCGCGATGGATGTAAAAATCGGCGGCGGC
ACGCCCGATTTTGCGCCCGCCCGGCAGTCGCTCGAGAATATGCGTCAGAAGCTGGAGGAGATGAAAGCGCTATCGCCAGG
GCCGATGAACCCTGATATCTCAAGGGAGGTCTTGTCCAACTGGCAGGCCTTGCTGGAGAAAGGCGTCGTTCCTCAAATGC
AACTGGCGCAGCAAGGATCGCTGACCGCCTGGAGCGAACATGCCAGTACGGTCACGCCCGCACTCAGTCGCGCGTTCGGT
GCCAGCGCGGAACGGTTTAGTCATGAAGCTGGCGCCATGCTGGATAACACACGTGTGATGGTCGATGGTAAAACCTATAC
CATCCGCATCCTGCTTATCACGGCGGTGATTCTGGGCATTGCTATCCTGATTTTTACCGATCGCTATCTGGTTGCAATGA
TGGTGAAACCGCTGGAGCGCATCCGTCAGCAATTTCAGCGCATCGCGCAAGGCGATCTTAGCCAGCCGATTGAAGCGTTG
GGGCGTAACTGCGTAGGCCGGTTGGTGCCGCTACTGCGCGCGATGCAGGACAGTTTACGCGAAGCCGTGAGTACGATCCG
CGCCGGAAGCGACAATATCTGGCGCGGCGCGACGGAAATTTCTACTGGTAATAACGATCTCTCTTCCCGAACGGAAGAAC
AGGCCGCCGCGCTGGAAGAAACTGCCGCCAGCATGGAACAGCTTACCGCAACGGTGAAAATGAACGCCGAACACGCTCGC
CAGGCGAGTCAGCTTGCGGATGCCGCCTCGCTAACGGCAGGAAAAGGCGGTGAACTGGTTTCCGATGTGGTAGAAACCAT
GGACGGTATTTCCGCCAGTTCGCAGCAGATCGCCGAAATTACTACCGTGATTAATAGTATTGCTTTCCAGACCAATATTC
TGGCCTTGAACGCAGCGGTAGAAGCGGCCAGAGCGGGCGAGCAGGGACGCGGCTTCGCGGTGGTCGCCGGTGAGGTACGT
AACCTGGCCAGCCGCAGCGCGGGGGCGGCGAAAGAAATTGAAGCCTTAATTGGCGAATCGGTACGTCGCGTAGCGCAGGG
CGCGCAGTTGGTCCAGGAGACCGGTGCGACGATGGAAGCCATCCTGCGCGGCGTCACGGAAGTGACGACGATTATGAAAC
AGATCGCATCCGCCTCCGAAGATCAGAGTAAAGGTATCTCTCAGGTTGGCGTGGCGATCACGCAAATGGATAGCGTTACG
CAACAAAACGCCGCGCTGGTTGAGCAGGTTTCCGCGGCGGCGGCGGCGCTGGAACGGCAGACGGAGGATTTGCAACGCTC
CGTACAGCAGTTCCGGCTTTCCGCTAGTGAGCCGCAACAACGCGTAACGGCGAAAGCGGCGCCTGGCGTTCAGAGAATGG
CGTCGGCTCCCGCACAGTCTACTGATGAATGGGTTTCTTTCTGA

Upstream 100 bases:

>100_bases
AAAAAATGGAGAATGCATTATATATTCTCCGCGCCTTGCCGATAACGAGAGTGCGTCATCGTCTGATGACTAATCTCTTA
TATTCAGCAAGGAAATTCAT

Downstream 100 bases:

>100_bases
TGTGAAGCAAAAAAGCGCGTAATGCGCTGGTCTTCATTTAATCAATCGCTATATAATTTATTATATAGCGATTGAGGAGG
TCAGATGAATAATCATTTTG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MRLLQNFTIRMVMLTILGLFCLLWSGVGLYSVHALSEVSEGNDIDRHLVRQMTVLSQGNDQYFRFVTRLSRAMDVKIGGG
TPDFAPARQSLENMRQKLEEMKALSPGPMNPDISREVLSNWQALLEKGVVPQMQLAQQGSLTAWSEHASTVTPALSRAFG
ASAERFSHEAGAMLDNTRVMVDGKTYTIRILLITAVILGIAILIFTDRYLVAMMVKPLERIRQQFQRIAQGDLSQPIEAL
GRNCVGRLVPLLRAMQDSLREAVSTIRAGSDNIWRGATEISTGNNDLSSRTEEQAAALEETAASMEQLTATVKMNAEHAR
QASQLADAASLTAGKGGELVSDVVETMDGISASSQQIAEITTVINSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR
NLASRSAGAAKEIEALIGESVRRVAQGAQLVQETGATMEAILRGVTEVTTIMKQIASASEDQSKGISQVGVAITQMDSVT
QQNAALVEQVSAAAAALERQTEDLQRSVQQFRLSASEPQQRVTAKAAPGVQRMASAPAQSTDEWVSF

Sequences:

>Translated_547_residues
MRLLQNFTIRMVMLTILGLFCLLWSGVGLYSVHALSEVSEGNDIDRHLVRQMTVLSQGNDQYFRFVTRLSRAMDVKIGGG
TPDFAPARQSLENMRQKLEEMKALSPGPMNPDISREVLSNWQALLEKGVVPQMQLAQQGSLTAWSEHASTVTPALSRAFG
ASAERFSHEAGAMLDNTRVMVDGKTYTIRILLITAVILGIAILIFTDRYLVAMMVKPLERIRQQFQRIAQGDLSQPIEAL
GRNCVGRLVPLLRAMQDSLREAVSTIRAGSDNIWRGATEISTGNNDLSSRTEEQAAALEETAASMEQLTATVKMNAEHAR
QASQLADAASLTAGKGGELVSDVVETMDGISASSQQIAEITTVINSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR
NLASRSAGAAKEIEALIGESVRRVAQGAQLVQETGATMEAILRGVTEVTTIMKQIASASEDQSKGISQVGVAITQMDSVT
QQNAALVEQVSAAAAALERQTEDLQRSVQQFRLSASEPQQRVTAKAAPGVQRMASAPAQSTDEWVSF
>Mature_547_residues
MRLLQNFTIRMVMLTILGLFCLLWSGVGLYSVHALSEVSEGNDIDRHLVRQMTVLSQGNDQYFRFVTRLSRAMDVKIGGG
TPDFAPARQSLENMRQKLEEMKALSPGPMNPDISREVLSNWQALLEKGVVPQMQLAQQGSLTAWSEHASTVTPALSRAFG
ASAERFSHEAGAMLDNTRVMVDGKTYTIRILLITAVILGIAILIFTDRYLVAMMVKPLERIRQQFQRIAQGDLSQPIEAL
GRNCVGRLVPLLRAMQDSLREAVSTIRAGSDNIWRGATEISTGNNDLSSRTEEQAAALEETAASMEQLTATVKMNAEHAR
QASQLADAASLTAGKGGELVSDVVETMDGISASSQQIAEITTVINSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR
NLASRSAGAAKEIEALIGESVRRVAQGAQLVQETGATMEAILRGVTEVTTIMKQIASASEDQSKGISQVGVAITQMDSVT
QQNAALVEQVSAAAAALERQTEDLQRSVQQFRLSASEPQQRVTAKAAPGVQRMASAPAQSTDEWVSF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=424, Percent_Identity=49.7641509433962, Blast_Score=349, Evalue=3e-97,
Organism=Escherichia coli, GI2367378, Length=378, Percent_Identity=54.4973544973545, Blast_Score=326, Evalue=2e-90,
Organism=Escherichia coli, GI1788195, Length=339, Percent_Identity=56.047197640118, Blast_Score=319, Evalue=2e-88,
Organism=Escherichia coli, GI1788194, Length=335, Percent_Identity=55.2238805970149, Blast_Score=318, Evalue=7e-88,
Organism=Escherichia coli, GI1789453, Length=324, Percent_Identity=38.5802469135802, Blast_Score=209, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 58900; Mature: 58900

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS50885 HAMP ; PS00538 CHEMOTAXIS_TRANSDUC_1 ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLQNFTIRMVMLTILGLFCLLWSGVGLYSVHALSEVSEGNDIDRHLVRQMTVLSQGND
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCH
QYFRFVTRLSRAMDVKIGGGTPDFAPARQSLENMRQKLEEMKALSPGPMNPDISREVLSN
HHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
WQALLEKGVVPQMQLAQQGSLTAWSEHASTVTPALSRAFGASAERFSHEAGAMLDNTRVM
HHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEE
VDGKTYTIRILLITAVILGIAILIFTDRYLVAMMVKPLERIRQQFQRIAQGDLSQPIEAL
ECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
GRNCVGRLVPLLRAMQDSLREAVSTIRAGSDNIWRGATEISTGNNDLSSRTEEQAAALEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHH
TAASMEQLTATVKMNAEHARQASQLADAASLTAGKGGELVSDVVETMDGISASSQQIAEI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
TTVINSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAGAAKEIEALIGES
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHH
VRRVAQGAQLVQETGATMEAILRGVTEVTTIMKQIASASEDQSKGISQVGVAITQMDSVT
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHH
QQNAALVEQVSAAAAALERQTEDLQRSVQQFRLSASEPQQRVTAKAAPGVQRMASAPAQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHCCCCCC
TDEWVSF
CHHHHCC
>Mature Secondary Structure
MRLLQNFTIRMVMLTILGLFCLLWSGVGLYSVHALSEVSEGNDIDRHLVRQMTVLSQGND
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCH
QYFRFVTRLSRAMDVKIGGGTPDFAPARQSLENMRQKLEEMKALSPGPMNPDISREVLSN
HHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
WQALLEKGVVPQMQLAQQGSLTAWSEHASTVTPALSRAFGASAERFSHEAGAMLDNTRVM
HHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEE
VDGKTYTIRILLITAVILGIAILIFTDRYLVAMMVKPLERIRQQFQRIAQGDLSQPIEAL
ECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
GRNCVGRLVPLLRAMQDSLREAVSTIRAGSDNIWRGATEISTGNNDLSSRTEEQAAALEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHH
TAASMEQLTATVKMNAEHARQASQLADAASLTAGKGGELVSDVVETMDGISASSQQIAEI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
TTVINSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAGAAKEIEALIGES
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHH
VRRVAQGAQLVQETGATMEAILRGVTEVTTIMKQIASASEDQSKGISQVGVAITQMDSVT
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHH
QQNAALVEQVSAAAAALERQTEDLQRSVQQFRLSASEPQQRVTAKAAPGVQRMASAPAQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHCCCCCC
TDEWVSF
CHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]