Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is csgA
Identifier: 194736345
GI number: 194736345
Start: 1189938
End: 1190393
Strand: Direct
Name: csgA
Synonym: SeSA_A1210
Alternate gene names: 194736345
Gene position: 1189938-1190393 (Clockwise)
Preceding gene: 194734708
Following gene: 194737637
Centisome position: 25.27
GC content: 51.54
Gene sequence:
>456_bases ATGAAACTTTTAAAAGTGGCAGCATTCGCAGCAATCGTAGTTTCTGGCAGTGCTCTGGCAGGCGTCGTTCCACAATGGGG CGGCGGTGGCAATCATAACGGCGGCGGCAATAGTTCCGGCCCGGACTCAACGTTGAGCATTTATCAGTACGGTTCCGCTA ACGCTGCGCTTGCTCTGCAAAGCGATGCCCGTAAATCTGAAACGACCATTACCCAGAGCGGTTATGGTAACGGCGCCGAT GTAGGCCAGGGTGCGGATAATAGTACTATTGAACTGACTCAGAATGGTTTCAGAAACAATGCCACCATCGACCAGTGGAA CGCTAAAAACTCCGATATTACTGTCGGCCAATACGGCGGTAATAACGCCGCGCTGGTTAATCAGACCGCATCTGATTCCA GCGTAATGGTGCGTCAGGTTGGTTTTGGCAACAACGCCACGGCTAACCAGTATTAA
Upstream 100 bases:
>100_bases AAACAGCAGTTGTAGTGCAGAAACAGTCGCAGATGGCTATTCGCGTCACCCAACGCTAATACCGTTACGACTTTTAAATC AATCCGATGGGGGTTTTACC
Downstream 100 bases:
>100_bases TTTAGCGTCTGCGCTAATAAAAAAACAGGGCTTACGCCCTGTTTTTTTTCGGGAGGAAATTATGCATAATTTATTGCTCC TTGCCGCACTTTCAAATCAG
Product: cryptic curlin major subunit
Products: NA
Alternate protein names: Fimbrin SEF17
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKLLKVAAFAAIVVSGSALAGVVPQWGGGGNHNGGGNSSGPDSTLSIYQYGSANAALALQSDARKSETTITQSGYGNGAD VGQGADNSTIELTQNGFRNNATIDQWNAKNSDITVGQYGGNNAALVNQTASDSSVMVRQVGFGNNATANQY
Sequences:
>Translated_151_residues MKLLKVAAFAAIVVSGSALAGVVPQWGGGGNHNGGGNSSGPDSTLSIYQYGSANAALALQSDARKSETTITQSGYGNGAD VGQGADNSTIELTQNGFRNNATIDQWNAKNSDITVGQYGGNNAALVNQTASDSSVMVRQVGFGNNATANQY >Mature_151_residues MKLLKVAAFAAIVVSGSALAGVVPQWGGGGNHNGGGNSSGPDSTLSIYQYGSANAALALQSDARKSETTITQSGYGNGAD VGQGADNSTIELTQNGFRNNATIDQWNAKNSDITVGQYGGNNAALVNQTASDSSVMVRQVGFGNNATANQY
Specific function: Curlin is the structural subunit of the curli. Curli are coiled surface structures that assemble preferentially at growth temperatures below 37 degrees Celsius. Curli can bind to fibronectin
COG id: NA
COG function: NA
Gene ontology:
Cell location: Fimbrium. Note=Part of the curli surface structure
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CsgA/CsgB family
Homologues:
Organism=Escherichia coli, GI1787279, Length=151, Percent_Identity=74.8344370860927, Blast_Score=186, Evalue=4e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CSGA_SALEN (P0A1E7)
Other databases:
- EMBL: U43280 - PIR: JC6039 - GO: GO:0009289 - InterPro: IPR009742
Pfam domain/function: PF07012 Curlin_rpt
EC number: NA
Molecular weight: Translated: 15305; Mature: 15305
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLKVAAFAAIVVSGSALAGVVPQWGGGGNHNGGGNSSGPDSTLSIYQYGSANAALALQ CCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEC SDARKSETTITQSGYGNGADVGQGADNSTIELTQNGFRNNATIDQWNAKNSDITVGQYGG CCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCEEEEEECC NNAALVNQTASDSSVMVRQVGFGNNATANQY CCEEEEECCCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure MKLLKVAAFAAIVVSGSALAGVVPQWGGGGNHNGGGNSSGPDSTLSIYQYGSANAALALQ CCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEC SDARKSETTITQSGYGNGADVGQGADNSTIELTQNGFRNNATIDQWNAKNSDITVGQYGG CCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCEEEEEECC NNAALVNQTASDSSVMVRQVGFGNNATANQY CCEEEEECCCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8550497; 8104955; 1677357