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The map label for this gene is ygdR [C]

Identifier: 194736205

GI number: 194736205

Start: 1740140

End: 1740376

Strand: Reverse

Name: ygdR [C]

Synonym: SeSA_A1798

Alternate gene names: 194736205

Gene position: 1740376-1740140 (Counterclockwise)

Preceding gene: 194737106

Following gene: 194735914

Centisome position: 36.96

GC content: 45.99

Gene sequence:

>237_bases
ATGCAAAAATGTAGTCTTATTACGGTACTTAGCTTATCAGTGTTGATGCTAGCCGGATGTACAACGACCTATACCATGAC
GACCCGGACGGGAGATATTATTGAAACGCAGGGTAAGCCGGAGGTTGACACCGCAACCGGAATGACGAAATACGCTGATG
CTTATGGTTATCATCGCGTCATTAAAACCAGTGAAATAGTGCAGACGACAGAAGGCGCATCGAAACTGGACTGGTAA

Upstream 100 bases:

>100_bases
TCAGTACGGGCAAACAGGGAGCAATAGCCCTAATCATCCATCTTGCCGTTGCGGTATTCGGTAAAGTACATCAAAAATAG
AGGTGTCAGGGAAACGAGAG

Downstream 100 bases:

>100_bases
TGCGCTAAAGCAGTTGGGAGGCCGTGTCCTGTATGGGTACCGGACAGTTTCTGGGCCTGAATTGAATAGAGTGCCTGTAT
AGCCGAATTCCGGGTCTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MQKCSLITVLSLSVLMLAGCTTTYTMTTRTGDIIETQGKPEVDTATGMTKYADAYGYHRVIKTSEIVQTTEGASKLDW

Sequences:

>Translated_78_residues
MQKCSLITVLSLSVLMLAGCTTTYTMTTRTGDIIETQGKPEVDTATGMTKYADAYGYHRVIKTSEIVQTTEGASKLDW
>Mature_78_residues
MQKCSLITVLSLSVLMLAGCTTTYTMTTRTGDIIETQGKPEVDTATGMTKYADAYGYHRVIKTSEIVQTTEGASKLDW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8527; Mature: 8527

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKCSLITVLSLSVLMLAGCTTTYTMTTRTGDIIETQGKPEVDTATGMTKYADAYGYHRV
CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHH
IKTSEIVQTTEGASKLDW
HHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQKCSLITVLSLSVLMLAGCTTTYTMTTRTGDIIETQGKPEVDTATGMTKYADAYGYHRV
CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHH
IKTSEIVQTTEGASKLDW
HHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA