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The map label for this gene is ychO [H]

Identifier: 194735922

GI number: 194735922

Start: 1842747

End: 1844171

Strand: Reverse

Name: ychO [H]

Synonym: SeSA_A1905

Alternate gene names: 194735922

Gene position: 1844171-1842747 (Counterclockwise)

Preceding gene: 194737233

Following gene: 194737659

Centisome position: 39.16

GC content: 53.33

Gene sequence:

>1425_bases
ATGCCATTCCTCTTATCTTTTGTTGTAGAAGTTGCCGACACGTTGAGCCGTATTGTTTTTCGTTCATTCTCACTCTCGCT
TCTCTTGCTGACTGCCAGTGGTACGATCTGTGCGCAGGCGCAAGATCCTTTCACGCAAAACCGTCTGCCGGATTTAGGCA
TGATGCCGGAATCCCACGAAGGGGAAAAGCATTTTGCCGAGATGGCCAAAGCGTTTGGCGAAGCCAGCATGAAAAATAAC
GATCTGGATACTGGTGAACAGGCGCGGCAATTCGCTTTCGGACAGGTACGCGATGTGGTCAGCGAGCAGGTTAACCAGCA
GCTTGAAAGCTGGTTATCAGCCTGGGGCAGCGCCAGCGTTGATATTAACGTCGATAACGAAGGTCATTTTAACGGCAGTC
GCGGAAGCTGGTTTATCCCTTTACAGGATAAACAGCGCTATCTGACCTGGAGCCAGCTTGGCCTTACGCAACAGACTGAC
GGACTGGTAAGCAACGTTGGCGTAGGACAGCGCTGGGCGCAGGATGGCTGGCTTCTTGGCTATAATACCTTTTACGATAA
TCTGCTGGATGAAAATCTGCAGCGCGCCGGCTTTGGCGCGGAGGCGTGGGGCGAATATTTGCGTTTATCCGCCAACTATT
ATCAGCCTTTTGCCGACTGGCAGACGCATACGGCGACCTTAGAACAGCGAATGGCGCGCGGATATGATATCAACGCGCAA
ATGCGCCTGCCGTTTTACCAGCATATCAATACCAGCGTTAGTCTGGAGCAGTACTTTGGCGATAGCGTGGATCTGTTTGA
CTCCGGAACGGGGTATCACAATCCTGTCGCGTTAAAACTGGGTCTCAACTATACGCCAGTACCTTTGCTTACCGTGACCG
CCCAGCACAAACAGGGCGAGAGCGGGGTCAGTCAGAATAACCTGGGGCTGACGCTTAACTACCGCTTCGGCATGTCGCTC
AAAAAGCAGCTTGCCGCCAGTGAAGTGGCGCAAAGCCAGTCATTACGCGGTAGCCGCTATGATACGCCGCAACGTAACTC
GCTGCCGACAATGGAGTATCGGCAGCGTAAAACGTTAACGGTTTTTCTGGCGACGCCGCCCTGGGATCTTACGCCTGGTG
AGACGGTTGCGTTAAAATTGCAGGTGCGCAGCGTGCACGGTATTCGTCATTTGAGCTGGCAGGGCGATACACAGGCATTA
AGTTTGACGGCAGGAACGGACACCCGCAGTACCGAGGGCTGGACAATCATTATGCCGGCCTGGGATCACCGCGAAGGCGC
GGCAAATCGCTGGCGTTTATCGGTGGTAGTTGAGGATGAAAAAGGTCAGCGTGTCTCTTCCAATGAGATCACGCTCGCGC
TGACTGAACCGTTTATCACGATGCCGGACGATAATCCGCATTGGCAACCGTTCCAAGAGCAATAA

Upstream 100 bases:

>100_bases
TGGATAAAATCCCGGGACGCTCTGCGGAAAAAATAAGGATATTCCTGGAAGCACGAGAAAAGGCTGCAAAACCTGTCCGG
ACACGTTATGGTTTACTCTG

Downstream 100 bases:

>100_bases
TTAAAAGATACGTTCCTGATGCACCCAGACGGCGGCCTCCACGCGCGATTTCAGCTTCATTTTCTTGAGCATATGTTTCA
CGTGCACTTTGACCGTACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MPFLLSFVVEVADTLSRIVFRSFSLSLLLLTASGTICAQAQDPFTQNRLPDLGMMPESHEGEKHFAEMAKAFGEASMKNN
DLDTGEQARQFAFGQVRDVVSEQVNQQLESWLSAWGSASVDINVDNEGHFNGSRGSWFIPLQDKQRYLTWSQLGLTQQTD
GLVSNVGVGQRWAQDGWLLGYNTFYDNLLDENLQRAGFGAEAWGEYLRLSANYYQPFADWQTHTATLEQRMARGYDINAQ
MRLPFYQHINTSVSLEQYFGDSVDLFDSGTGYHNPVALKLGLNYTPVPLLTVTAQHKQGESGVSQNNLGLTLNYRFGMSL
KKQLAASEVAQSQSLRGSRYDTPQRNSLPTMEYRQRKTLTVFLATPPWDLTPGETVALKLQVRSVHGIRHLSWQGDTQAL
SLTAGTDTRSTEGWTIIMPAWDHREGAANRWRLSVVVEDEKGQRVSSNEITLALTEPFITMPDDNPHWQPFQEQ

Sequences:

>Translated_474_residues
MPFLLSFVVEVADTLSRIVFRSFSLSLLLLTASGTICAQAQDPFTQNRLPDLGMMPESHEGEKHFAEMAKAFGEASMKNN
DLDTGEQARQFAFGQVRDVVSEQVNQQLESWLSAWGSASVDINVDNEGHFNGSRGSWFIPLQDKQRYLTWSQLGLTQQTD
GLVSNVGVGQRWAQDGWLLGYNTFYDNLLDENLQRAGFGAEAWGEYLRLSANYYQPFADWQTHTATLEQRMARGYDINAQ
MRLPFYQHINTSVSLEQYFGDSVDLFDSGTGYHNPVALKLGLNYTPVPLLTVTAQHKQGESGVSQNNLGLTLNYRFGMSL
KKQLAASEVAQSQSLRGSRYDTPQRNSLPTMEYRQRKTLTVFLATPPWDLTPGETVALKLQVRSVHGIRHLSWQGDTQAL
SLTAGTDTRSTEGWTIIMPAWDHREGAANRWRLSVVVEDEKGQRVSSNEITLALTEPFITMPDDNPHWQPFQEQ
>Mature_473_residues
PFLLSFVVEVADTLSRIVFRSFSLSLLLLTASGTICAQAQDPFTQNRLPDLGMMPESHEGEKHFAEMAKAFGEASMKNND
LDTGEQARQFAFGQVRDVVSEQVNQQLESWLSAWGSASVDINVDNEGHFNGSRGSWFIPLQDKQRYLTWSQLGLTQQTDG
LVSNVGVGQRWAQDGWLLGYNTFYDNLLDENLQRAGFGAEAWGEYLRLSANYYQPFADWQTHTATLEQRMARGYDINAQM
RLPFYQHINTSVSLEQYFGDSVDLFDSGTGYHNPVALKLGLNYTPVPLLTVTAQHKQGESGVSQNNLGLTLNYRFGMSLK
KQLAASEVAQSQSLRGSRYDTPQRNSLPTMEYRQRKTLTVFLATPPWDLTPGETVALKLQVRSVHGIRHLSWQGDTQALS
LTAGTDTRSTEGWTIIMPAWDHREGAANRWRLSVVVEDEKGQRVSSNEITLALTEPFITMPDDNPHWQPFQEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intimin/invasin family [H]

Homologues:

Organism=Escherichia coli, GI145693120, Length=464, Percent_Identity=74.5689655172414, Blast_Score=694, Evalue=0.0,
Organism=Escherichia coli, GI145693153, Length=407, Percent_Identity=29.97542997543, Blast_Score=170, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53346; Mature: 53215

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFLLSFVVEVADTLSRIVFRSFSLSLLLLTASGTICAQAQDPFTQNRLPDLGMMPESHE
CCHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCEEECCCCCCHHCCCCCCCCCCCCCC
GEKHFAEMAKAFGEASMKNNDLDTGEQARQFAFGQVRDVVSEQVNQQLESWLSAWGSASV
CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
DINVDNEGHFNGSRGSWFIPLQDKQRYLTWSQLGLTQQTDGLVSNVGVGQRWAQDGWLLG
EEEECCCCCCCCCCCEEEEEECCCCCEEEHHHCCCCCCCCCHHHCCCCCCCCCCCCEEEE
YNTFYDNLLDENLQRAGFGAEAWGEYLRLSANYYQPFADWQTHTATLEQRMARGYDINAQ
HHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEE
MRLPFYQHINTSVSLEQYFGDSVDLFDSGTGYHNPVALKLGLNYTPVPLLTVTAQHKQGE
EECCHHHHCCCCEEHHHHCCCCEEEECCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCC
SGVSQNNLGLTLNYRFGMSLKKQLAASEVAQSQSLRGSRYDTPQRNSLPTMEYRQRKTLT
CCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCEEE
VFLATPPWDLTPGETVALKLQVRSVHGIRHLSWQGDTQALSLTAGTDTRSTEGWTIIMPA
EEEECCCCCCCCCCEEEEEEEEEEECCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEC
WDHREGAANRWRLSVVVEDEKGQRVSSNEITLALTEPFITMPDDNPHWQPFQEQ
CCCCCCCCCEEEEEEEEECCCCCEECCCCEEEEEECCEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
PFLLSFVVEVADTLSRIVFRSFSLSLLLLTASGTICAQAQDPFTQNRLPDLGMMPESHE
CHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCEEECCCCCCHHCCCCCCCCCCCCCC
GEKHFAEMAKAFGEASMKNNDLDTGEQARQFAFGQVRDVVSEQVNQQLESWLSAWGSASV
CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
DINVDNEGHFNGSRGSWFIPLQDKQRYLTWSQLGLTQQTDGLVSNVGVGQRWAQDGWLLG
EEEECCCCCCCCCCCEEEEEECCCCCEEEHHHCCCCCCCCCHHHCCCCCCCCCCCCEEEE
YNTFYDNLLDENLQRAGFGAEAWGEYLRLSANYYQPFADWQTHTATLEQRMARGYDINAQ
HHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEE
MRLPFYQHINTSVSLEQYFGDSVDLFDSGTGYHNPVALKLGLNYTPVPLLTVTAQHKQGE
EECCHHHHCCCCEEHHHHCCCCEEEECCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCC
SGVSQNNLGLTLNYRFGMSLKKQLAASEVAQSQSLRGSRYDTPQRNSLPTMEYRQRKTLT
CCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCEEE
VFLATPPWDLTPGETVALKLQVRSVHGIRHLSWQGDTQALSLTAGTDTRSTEGWTIIMPA
EEEECCCCCCCCCCEEEEEEEEEEECCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEC
WDHREGAANRWRLSVVVEDEKGQRVSSNEITLALTEPFITMPDDNPHWQPFQEQ
CCCCCCCCCEEEEEEEEECCCCCEECCCCEEEEEECCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2657652; 2649492; 7567469 [H]