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The map label for this gene is sodC [H]

Identifier: 194735572

GI number: 194735572

Start: 1479965

End: 1480486

Strand: Direct

Name: sodC [H]

Synonym: SeSA_A1537

Alternate gene names: 194735572

Gene position: 1479965-1480486 (Clockwise)

Preceding gene: 194734244

Following gene: 194736196

Centisome position: 31.43

GC content: 56.32

Gene sequence:

>522_bases
ATGAAGCGATTAAGTTTAGCGATGGTGACGCTGCTGGCCTGTGCGGGTGCGCAGGCCGCCAGCGAGAAAGTAGAGATGAA
CCTGGTGACGGCGCAAGGCGTAGGACAGTCTATCGGCACCGTCGTCATCGATGAAACCGAAGGCGGCTTAAAATTTACCC
CACACCTTAAAGCGTTACCGCCGGGCGAGCATGGTTTTCACATTCATGCCAACGGTAGCTGCCAGCCCGCGATTAAAGAC
GGCAAAGCAGTTGCCGCAGAGGCCGCTGGTGGTCATCTGGACCCACAAAATACCGGCAAGCATGAAGGACCGGAAGGCCA
GGGGCATCTGGGCGACCTCCCGGTGTTAGTCGTTAATAATGATGGTATCGCCACCGAACCGGTTACTGCGCCGCGTCTGA
AGTCTCTTGATGAAGTGAAAGATAAAGCGCTCATGATCCATGTGGGCGGCGATAACATGTCCGATCAGCCGAAACCGCTC
GGCGGCGGCGGAATGCGTTACGCCTGCGGCGTCATTAAATAA

Upstream 100 bases:

>100_bases
CTGGGTTATGACGTGCCGTAATCGCCAACTCGTTGACTTTCCGTTCATGTTTTCGCCAGTGGTTTACACTTAACAGACGA
CCACATGTAACGGAGGTTTT

Downstream 100 bases:

>100_bases
CCCGGAGACAGTGTTCCCTGCGCTGGAGCCTGTTCCAGCTGCGACAGCGAACAGTGTAAACGCCAGATAATCGCCGCCAG
CTCATGCGCGGCGGGCTGAT

Product: superoxide dismutase

Products: NA

Alternate protein names: sodCII [H]

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKRLSLAMVTLLACAGAQAASEKVEMNLVTAQGVGQSIGTVVIDETEGGLKFTPHLKALPPGEHGFHIHANGSCQPAIKD
GKAVAAEAAGGHLDPQNTGKHEGPEGQGHLGDLPVLVVNNDGIATEPVTAPRLKSLDEVKDKALMIHVGGDNMSDQPKPL
GGGGMRYACGVIK

Sequences:

>Translated_173_residues
MKRLSLAMVTLLACAGAQAASEKVEMNLVTAQGVGQSIGTVVIDETEGGLKFTPHLKALPPGEHGFHIHANGSCQPAIKD
GKAVAAEAAGGHLDPQNTGKHEGPEGQGHLGDLPVLVVNNDGIATEPVTAPRLKSLDEVKDKALMIHVGGDNMSDQPKPL
GGGGMRYACGVIK
>Mature_173_residues
MKRLSLAMVTLLACAGAQAASEKVEMNLVTAQGVGQSIGTVVIDETEGGLKFTPHLKALPPGEHGFHIHANGSCQPAIKD
GKAVAAEAAGGHLDPQNTGKHEGPEGQGHLGDLPVLVVNNDGIATEPVTAPRLKSLDEVKDKALMIHVGGDNMSDQPKPL
GGGGMRYACGVIK

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

Organism=Escherichia coli, GI1787934, Length=173, Percent_Identity=82.6589595375723, Blast_Score=295, Evalue=1e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018152
- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 17752; Mature: 17752

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00332 SOD_CU_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLSLAMVTLLACAGAQAASEKVEMNLVTAQGVGQSIGTVVIDETEGGLKFTPHLKALP
CCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCCC
PGEHGFHIHANGSCQPAIKDGKAVAAEAAGGHLDPQNTGKHEGPEGQGHLGDLPVLVVNN
CCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
DGIATEPVTAPRLKSLDEVKDKALMIHVGGDNMSDQPKPLGGGGMRYACGVIK
CCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MKRLSLAMVTLLACAGAQAASEKVEMNLVTAQGVGQSIGTVVIDETEGGLKFTPHLKALP
CCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCCC
PGEHGFHIHANGSCQPAIKDGKAVAAEAAGGHLDPQNTGKHEGPEGQGHLGDLPVLVVNN
CCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
DGIATEPVTAPRLKSLDEVKDKALMIHVGGDNMSDQPKPLGGGGMRYACGVIK
CCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10377444; 11677609 [H]