Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is chbF [H]
Identifier: 194735432
GI number: 194735432
Start: 1361616
End: 1362971
Strand: Direct
Name: chbF [H]
Synonym: SeSA_A1413
Alternate gene names: 194735432
Gene position: 1361616-1362971 (Clockwise)
Preceding gene: 194735027
Following gene: 194735929
Centisome position: 28.91
GC content: 47.94
Gene sequence:
>1356_bases ATGAGCCAGAAATTAAAAGTCGTCACTATTGGTGGCGGGAGCAGCTACACCCCTGAATTACTTGAAGGCTTTATTAAGCG CTACCATGAATTACCTGTCACCGAATTATGGCTGGTTGATGTTGAAGACGGGAAAGAGAAGCTGGACATTATTTATGATC TCTGCCAGCGAATGATTGATAAAGCAGGCGTTCCGCTAAAATTGTATAAAACGCTGGATCGTCGGGAAGCGCTGAAAGAC GCTAATTTTGTTACTACCCAGCTGCGCGTTGGTCAACTCAAAGCCCGTGAACTGGACGAGCGTATCCCGCTTAGCCACGG CTATCTGGGGCAAGAAACCAACGGCGCTGGCGGTTTATTTAAAGGGTTGCGCACCATTCCGGTTATTTTTGACATCATTA AGGATGTTGAGGAATTATGTCCGAATGCGTGGGTCATTAACTTTACTAATCCGGCGGGGATGGTGACGGAAGCGGTTTAT CGCCATACCAACTTTAAAAAATTCATCGGCGTATGTAATATTCCTGTCGGCATGAAAATGTTTATTCATGACGTGCTGGC GCTGAATGAGAATGACGATCTTTCCATTGACCTGTTTGGTCTAAACCATATGGTCTTTATTAAAGATGTGCTGGTGAATG GCACCTCACGGTTCGCAGAATTACTGGATGGCGTGGCGTCCGGTCAGTTGAAAGCGTCAACCGTAAAAAATATCTTTGAT CTGCCGTTTAGTGAAGGATTGATTCGCTCGCTGAACATGCTGCCGTGCTCTTATTTGTTGTATTACTTCAAGCAAAAAGA GATGCTGGCGATTGAAATGGGCGAATATTACAAAGGCGGCGCGCGCGCTCAGGTCGTACAAAAAGTGGAGAAACAACTCT TCGACTTGTACAAAAATCCTGAGCTAAACGTGAAGCCGAAAGAGCTTGAACAACGCGGCGGCGCTTATTATTCCGATGCC GCTTGTGAAGTCATTAACGCTATTTATAATGACAAGCAGACTGAGCATTACGTTAATATTCCACATCATGGGCATGTCGA GAATATCCCGGCGGACTGGGCGGTGGAAATGACCTGCATTCTGGGACGCAATGGCGCGACGCCGCACCCGCGTATCACCC GTTTTGACGAAAAAGTGCTGGGGCTTATCCACACTATTAAAGGATTTGAGGTCGCGGCCAGCAATGCGGCGCTGAGCGGA AACTTTAATGATGTGCTGCTGGCGCTTAACCTGAGTCCGCTGGTGCATTCCGACCGCGACGCAGAAGTCCTGGCGCGTGA GCTCATTCTGGCGCATGAAAAATGGCTGCCTAATTTTGCCGCTTGCATCGAAGCGCTTAAAGGTAAGCACCACTGA
Upstream 100 bases:
>100_bases CATTTCACGCTTGCCCCAATAGCGCGGGGAACGTCACGCTATTTCTTACGAGCGGGCATAGCGTAATACATATCAGTGTC ATACACTGAAGGGAGATATT
Downstream 100 bases:
>100_bases CAGAGGTAGGCTATGGAACGCGTGTTGATTGTGAATGCCGATGATTTTGGCCTGAGTAAAGGGCAAAATTACGGCATTGT TGAAGCATATCGCAACGGCG
Product: 6-phospho-beta-glucosidase
Products: NA
Alternate protein names: Cellobiose-6-phosphate hydrolase; Phospho-chitobiase [H]
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVTELWLVDVEDGKEKLDIIYDLCQRMIDKAGVPLKLYKTLDRREALKD ANFVTTQLRVGQLKARELDERIPLSHGYLGQETNGAGGLFKGLRTIPVIFDIIKDVEELCPNAWVINFTNPAGMVTEAVY RHTNFKKFIGVCNIPVGMKMFIHDVLALNENDDLSIDLFGLNHMVFIKDVLVNGTSRFAELLDGVASGQLKASTVKNIFD LPFSEGLIRSLNMLPCSYLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFDLYKNPELNVKPKELEQRGGAYYSDA ACEVINAIYNDKQTEHYVNIPHHGHVENIPADWAVEMTCILGRNGATPHPRITRFDEKVLGLIHTIKGFEVAASNAALSG NFNDVLLALNLSPLVHSDRDAEVLARELILAHEKWLPNFAACIEALKGKHH
Sequences:
>Translated_451_residues MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVTELWLVDVEDGKEKLDIIYDLCQRMIDKAGVPLKLYKTLDRREALKD ANFVTTQLRVGQLKARELDERIPLSHGYLGQETNGAGGLFKGLRTIPVIFDIIKDVEELCPNAWVINFTNPAGMVTEAVY RHTNFKKFIGVCNIPVGMKMFIHDVLALNENDDLSIDLFGLNHMVFIKDVLVNGTSRFAELLDGVASGQLKASTVKNIFD LPFSEGLIRSLNMLPCSYLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFDLYKNPELNVKPKELEQRGGAYYSDA ACEVINAIYNDKQTEHYVNIPHHGHVENIPADWAVEMTCILGRNGATPHPRITRFDEKVLGLIHTIKGFEVAASNAALSG NFNDVLLALNLSPLVHSDRDAEVLARELILAHEKWLPNFAACIEALKGKHH >Mature_450_residues SQKLKVVTIGGGSSYTPELLEGFIKRYHELPVTELWLVDVEDGKEKLDIIYDLCQRMIDKAGVPLKLYKTLDRREALKDA NFVTTQLRVGQLKARELDERIPLSHGYLGQETNGAGGLFKGLRTIPVIFDIIKDVEELCPNAWVINFTNPAGMVTEAVYR HTNFKKFIGVCNIPVGMKMFIHDVLALNENDDLSIDLFGLNHMVFIKDVLVNGTSRFAELLDGVASGQLKASTVKNIFDL PFSEGLIRSLNMLPCSYLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFDLYKNPELNVKPKELEQRGGAYYSDAA CEVINAIYNDKQTEHYVNIPHHGHVENIPADWAVEMTCILGRNGATPHPRITRFDEKVLGLIHTIKGFEVAASNAALSGN FNDVLLALNLSPLVHSDRDAEVLARELILAHEKWLPNFAACIEALKGKHH
Specific function: Hydrolyzes a wide variety of P-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, gentiobiose-6P, methyl- beta-glucoside-6P and p-nitrophenyl-beta-D-glucopyranoside-6P. Is also able to hydrolyze phospho-N,N'-diacetylchitobiose [H]
COG id: COG1486
COG function: function code G; Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 4 family [H]
Homologues:
Organism=Escherichia coli, GI1788029, Length=450, Percent_Identity=90.8888888888889, Blast_Score=859, Evalue=0.0, Organism=Escherichia coli, GI1790560, Length=462, Percent_Identity=25.7575757575758, Blast_Score=120, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019802 - InterPro: IPR001088 - InterPro: IPR022616 - InterPro: IPR015955 - InterPro: IPR016040 [H]
Pfam domain/function: PF02056 Glyco_hydro_4; PF11975 Glyco_hydro_4C [H]
EC number: =3.2.1.86 [H]
Molecular weight: Translated: 50655; Mature: 50524
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: PS01324 GLYCOSYL_HYDROL_F4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVTELWLVDVEDGKEKLDIIYDLCQRMID CCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHH KAGVPLKLYKTLDRREALKDANFVTTQLRVGQLKARELDERIPLSHGYLGQETNGAGGLF HCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH KGLRTIPVIFDIIKDVEELCPNAWVINFTNPAGMVTEAVYRHTNFKKFIGVCNIPVGMKM HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHH FIHDVLALNENDDLSIDLFGLNHMVFIKDVLVNGTSRFAELLDGVASGQLKASTVKNIFD HHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHC LPFSEGLIRSLNMLPCSYLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFDLYKNP CCCHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHCCC ELNVKPKELEQRGGAYYSDAACEVINAIYNDKQTEHYVNIPHHGHVENIPADWAVEMTCI CCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHEEEEEE LGRNGATPHPRITRFDEKVLGLIHTIKGFEVAASNAALSGNFNDVLLALNLSPLVHSDRD ECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCEECCCCCEEEEEEECCHHHCCCCC AEVLARELILAHEKWLPNFAACIEALKGKHH HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC >Mature Secondary Structure SQKLKVVTIGGGSSYTPELLEGFIKRYHELPVTELWLVDVEDGKEKLDIIYDLCQRMID CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHH KAGVPLKLYKTLDRREALKDANFVTTQLRVGQLKARELDERIPLSHGYLGQETNGAGGLF HCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH KGLRTIPVIFDIIKDVEELCPNAWVINFTNPAGMVTEAVYRHTNFKKFIGVCNIPVGMKM HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHH FIHDVLALNENDDLSIDLFGLNHMVFIKDVLVNGTSRFAELLDGVASGQLKASTVKNIFD HHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHC LPFSEGLIRSLNMLPCSYLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFDLYKNP CCCHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHCCC ELNVKPKELEQRGGAYYSDAACEVINAIYNDKQTEHYVNIPHHGHVENIPADWAVEMTCI CCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHEEEEEE LGRNGATPHPRITRFDEKVLGLIHTIKGFEVAASNAALSGNFNDVLLALNLSPLVHSDRD ECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCEECCCCCEEEEEEECCHHHCCCCC AEVLARELILAHEKWLPNFAACIEALKGKHH HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2179047; 9097039; 9278503; 8121401; 10572139; 9405618; 10913117 [H]