| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is mod [H]
Identifier: 194735291
GI number: 194735291
Start: 416113
End: 418071
Strand: Direct
Name: mod [H]
Synonym: SeSA_A0410
Alternate gene names: 194735291
Gene position: 416113-418071 (Clockwise)
Preceding gene: 194734657
Following gene: 194735729
Centisome position: 8.84
GC content: 46.4
Gene sequence:
>1959_bases ATGTTGAAAGATAACCAAAAACACAACGAGTCTGTTGCCCCGAATAGCGCCTTTCTGTCTGAGTTACAACGTGCATTACC GGAATTTTTTACCGCCGATCGCTATAACGAGCAGGGCGAACTGATCGCGAAAGGCGGATTTGATCTCGCCAAATTTGAGC GCGCGTTGAAAGCGCGTAATATTGATGAGCTGACTAGCGGTTATCAGATTGATTTTATTGGCAAAGATTACGCAAAAAAA CAGGCGGGTGAAAAATCCGTTACCGTTATCGTTCCTGACGTGGAACACAATACTCTGGCAGAAAATAAAAACAGCCATAA TCTTTTTCTGACCGGAGATAATCTGGATGTGTTACGCCATCTGCAAAATAATTACGCCGATACCGTCGATATGATCTATA TCGATCCCCCTTATAACACCGGATCGGACGGGTTTGTCTATCCCGATCATTTTGAATATAGCGATCGGGCGTTGCAGGAT ATGTTTGGTCTTAATGATACTGAACTGGCACGTTTAAAATCCATTCAGGGTAAATCGACGCACTCCGCGTGGTTATCTTT CATGTATCCGCGTCTTTTCCTGGCCAGGAAGCTCCTGAAAGATACCGGATTTATTTTTATCTCTATCGACGATAATGAGT ACGCCAATCTTAAATTAATGATGGATGAGATTTTTGGCGAAGGCGGATTTGTCACCAATGTGATGTGGAAGCGCAAAAAA GAGATTTCTAACGACTCTGATAACGTTTCCATCCAGGGAGAATACATTCTTGTTTACGCCAAAACCGGCCAGGGCGCTTT ACGTTTAGAACCGCTTTCTAAAGAGTATATTCAGAAATCCTATAAAGAACCGACCGAACAGTTTCCAGAAGGGAAATGGC GACCGGTGCCGTTAACGGTGTCAAAAGGGCTGAGCGGCGGCGGCTATACCTATAAAATTACCACGCCGAACGGTACGGTA CACGAAAGACTATGGGCTTATCCTGAAGCCAGTTACCAAAAACTGGTGGCCGATAATCTGGTCTATTTTGGCAAAGATAA CGGCGGTATTCCCCAGCGAGTCATGTACGCGCACCACAGTAAAGGGCAGCCAACGACCAATTACTGGGATAACGTCGCGT CGAATAAAGAGGGGAAAAAGGAGATTCTGGATCTCTTCGGCGACAACGTTTTTGATACGCCGAAACCGACCGCATTATTG AAGAAAATTATCAAGCTCGCCATCGATAAAGACGGCGTCGTTCTGGACTTTTTTGCCGGTTCCGGCACTACGGCCCATGC GGTAATGGCGCTGAATGAAGAAGATGGGGGGCAGCGCACGTTTATTCTGTGTACTATCGATCAGGCATTAAGCAATAACA CTATCGCGAAAAAAGCAGGTTATAACACTATTGATGAAATCAGCCGTGAGCGAATTACACGCGTTGCGGCGAAGATCCGC GCCAACAATCCCACGACCAATAGCGATCTCGGTTTTAAACATTATCGTTTTGCCACTCCGACACAGCAGACGCTGGACGA TCTGGATAGCTTCGATATTGCTACCGGCCATTTTATCAATACCAGCGGTCAACTGGCCGCTTTCACCGAGTCAGGATTTA CCGACATGATCAATCCTTTTTCCGCCAGAGGATTGGGCGTGCCGGGCGGCGCAAGCGGCGAAGAGACCTTATTAACGACA TGGCTGGTCGCCGATGGTTATAAAATGGATATTGACGTACAGACCGTTGATTTTTCCGGTTATTGCGCCAGGTATGTTGA TAATACGCGCCTGTATCTGATTGATGAACGATGGGGAACCGAGCAGACCCGCGATCTTCTCAACCACATTGGTACGCATC AGCTTCCGGTTCAGACTATTGTCATTTACGGCTACTCTTTCGACCTTGAATCCATTCGTGAACTGGAAATCGGCTTAAAA CAGCTTGATCAAAAAGTGAACCTGGTGAAGCGTTATTAA
Upstream 100 bases:
>100_bases ATGGCATCTGCCTTTCGTGACCATTACAATCATCGCTTACTTTTTTCTTTATAAGAAATTGATTGTTGGACCTTAAAATT ATCAACGGAGCGAAGATATC
Downstream 100 bases:
>100_bases GAGGGGATGAGGATGAATATTTTACTGGAAGAACTTCCCCATCAGGAACAGGCGTTAGCGGCGATTCTGGCGAGTTTCAC CGGTATCGATCACGCGCAGG
Product: type III restriction-modification system StyLTI enzyme mod
Products: NA
Alternate protein names: M.StyLTI; StyLTI methyltransferase [H]
Number of amino acids: Translated: 652; Mature: 652
Protein sequence:
>652_residues MLKDNQKHNESVAPNSAFLSELQRALPEFFTADRYNEQGELIAKGGFDLAKFERALKARNIDELTSGYQIDFIGKDYAKK QAGEKSVTVIVPDVEHNTLAENKNSHNLFLTGDNLDVLRHLQNNYADTVDMIYIDPPYNTGSDGFVYPDHFEYSDRALQD MFGLNDTELARLKSIQGKSTHSAWLSFMYPRLFLARKLLKDTGFIFISIDDNEYANLKLMMDEIFGEGGFVTNVMWKRKK EISNDSDNVSIQGEYILVYAKTGQGALRLEPLSKEYIQKSYKEPTEQFPEGKWRPVPLTVSKGLSGGGYTYKITTPNGTV HERLWAYPEASYQKLVADNLVYFGKDNGGIPQRVMYAHHSKGQPTTNYWDNVASNKEGKKEILDLFGDNVFDTPKPTALL KKIIKLAIDKDGVVLDFFAGSGTTAHAVMALNEEDGGQRTFILCTIDQALSNNTIAKKAGYNTIDEISRERITRVAAKIR ANNPTTNSDLGFKHYRFATPTQQTLDDLDSFDIATGHFINTSGQLAAFTESGFTDMINPFSARGLGVPGGASGEETLLTT WLVADGYKMDIDVQTVDFSGYCARYVDNTRLYLIDERWGTEQTRDLLNHIGTHQLPVQTIVIYGYSFDLESIRELEIGLK QLDQKVNLVKRY
Sequences:
>Translated_652_residues MLKDNQKHNESVAPNSAFLSELQRALPEFFTADRYNEQGELIAKGGFDLAKFERALKARNIDELTSGYQIDFIGKDYAKK QAGEKSVTVIVPDVEHNTLAENKNSHNLFLTGDNLDVLRHLQNNYADTVDMIYIDPPYNTGSDGFVYPDHFEYSDRALQD MFGLNDTELARLKSIQGKSTHSAWLSFMYPRLFLARKLLKDTGFIFISIDDNEYANLKLMMDEIFGEGGFVTNVMWKRKK EISNDSDNVSIQGEYILVYAKTGQGALRLEPLSKEYIQKSYKEPTEQFPEGKWRPVPLTVSKGLSGGGYTYKITTPNGTV HERLWAYPEASYQKLVADNLVYFGKDNGGIPQRVMYAHHSKGQPTTNYWDNVASNKEGKKEILDLFGDNVFDTPKPTALL KKIIKLAIDKDGVVLDFFAGSGTTAHAVMALNEEDGGQRTFILCTIDQALSNNTIAKKAGYNTIDEISRERITRVAAKIR ANNPTTNSDLGFKHYRFATPTQQTLDDLDSFDIATGHFINTSGQLAAFTESGFTDMINPFSARGLGVPGGASGEETLLTT WLVADGYKMDIDVQTVDFSGYCARYVDNTRLYLIDERWGTEQTRDLLNHIGTHQLPVQTIVIYGYSFDLESIRELEIGLK QLDQKVNLVKRY >Mature_652_residues MLKDNQKHNESVAPNSAFLSELQRALPEFFTADRYNEQGELIAKGGFDLAKFERALKARNIDELTSGYQIDFIGKDYAKK QAGEKSVTVIVPDVEHNTLAENKNSHNLFLTGDNLDVLRHLQNNYADTVDMIYIDPPYNTGSDGFVYPDHFEYSDRALQD MFGLNDTELARLKSIQGKSTHSAWLSFMYPRLFLARKLLKDTGFIFISIDDNEYANLKLMMDEIFGEGGFVTNVMWKRKK EISNDSDNVSIQGEYILVYAKTGQGALRLEPLSKEYIQKSYKEPTEQFPEGKWRPVPLTVSKGLSGGGYTYKITTPNGTV HERLWAYPEASYQKLVADNLVYFGKDNGGIPQRVMYAHHSKGQPTTNYWDNVASNKEGKKEILDLFGDNVFDTPKPTALL KKIIKLAIDKDGVVLDFFAGSGTTAHAVMALNEEDGGQRTFILCTIDQALSNNTIAKKAGYNTIDEISRERITRVAAKIR ANNPTTNSDLGFKHYRFATPTQQTLDDLDSFDIATGHFINTSGQLAAFTESGFTDMINPFSARGLGVPGGASGEETLLTT WLVADGYKMDIDVQTVDFSGYCARYVDNTRLYLIDERWGTEQTRDLLNHIGTHQLPVQTIVIYGYSFDLESIRELEIGLK QLDQKVNLVKRY
Specific function: Binds the system-specific DNA recognition site 5'-CAGAG- 3'. Necessary for restriction and for methylation of A-4 [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 73339; Mature: 73339
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS00092 N6_MTASE ; PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKDNQKHNESVAPNSAFLSELQRALPEFFTADRYNEQGELIAKGGFDLAKFERALKARN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHCC IDELTSGYQIDFIGKDYAKKQAGEKSVTVIVPDVEHNTLAENKNSHNLFLTGDNLDVLRH HHHHHCCCEEEECCCHHHHHHCCCCEEEEEECCCCCCHHHCCCCCCEEEEECCCHHHHHH LQNNYADTVDMIYIDPPYNTGSDGFVYPDHFEYSDRALQDMFGLNDTELARLKSIQGKST HHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCH HSAWLSFMYPRLFLARKLLKDTGFIFISIDDNEYANLKLMMDEIFGEGGFVTNVMWKRKK HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEHHHCCCCCEEEHHHHHHHH EISNDSDNVSIQGEYILVYAKTGQGALRLEPLSKEYIQKSYKEPTEQFPEGKWRPVPLTV HCCCCCCCEEEEEEEEEEEEECCCCCEEECCCCHHHHHHHHCCHHHHCCCCCCEEEEEEH SKGLSGGGYTYKITTPNGTVHERLWAYPEASYQKLVADNLVYFGKDNGGIPQRVMYAHHS CCCCCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCCCHHHHHHCCC KGQPTTNYWDNVASNKEGKKEILDLFGDNVFDTPKPTALLKKIIKLAIDKDGVVLDFFAG CCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECC SGTTAHAVMALNEEDGGQRTFILCTIDQALSNNTIAKKAGYNTIDEISRERITRVAAKIR CCCCEEEEEEEECCCCCCEEEEEEEECHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHC ANNPTTNSDLGFKHYRFATPTQQTLDDLDSFDIATGHFINTSGQLAAFTESGFTDMINPF CCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCEECCCCCEEEEECCCCHHHCCCC SARGLGVPGGASGEETLLTTWLVADGYKMDIDVQTVDFSGYCARYVDNTRLYLIDERWGT CCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEEECCCCHHHHEECCCEEEEEECCCCC EQTRDLLNHIGTHQLPVQTIVIYGYSFDLESIRELEIGLKQLDQKVNLVKRY HHHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKDNQKHNESVAPNSAFLSELQRALPEFFTADRYNEQGELIAKGGFDLAKFERALKARN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHCC IDELTSGYQIDFIGKDYAKKQAGEKSVTVIVPDVEHNTLAENKNSHNLFLTGDNLDVLRH HHHHHCCCEEEECCCHHHHHHCCCCEEEEEECCCCCCHHHCCCCCCEEEEECCCHHHHHH LQNNYADTVDMIYIDPPYNTGSDGFVYPDHFEYSDRALQDMFGLNDTELARLKSIQGKST HHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCH HSAWLSFMYPRLFLARKLLKDTGFIFISIDDNEYANLKLMMDEIFGEGGFVTNVMWKRKK HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEHHHCCCCCEEEHHHHHHHH EISNDSDNVSIQGEYILVYAKTGQGALRLEPLSKEYIQKSYKEPTEQFPEGKWRPVPLTV HCCCCCCCEEEEEEEEEEEEECCCCCEEECCCCHHHHHHHHCCHHHHCCCCCCEEEEEEH SKGLSGGGYTYKITTPNGTVHERLWAYPEASYQKLVADNLVYFGKDNGGIPQRVMYAHHS CCCCCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCCCHHHHHHCCC KGQPTTNYWDNVASNKEGKKEILDLFGDNVFDTPKPTALLKKIIKLAIDKDGVVLDFFAG CCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECC SGTTAHAVMALNEEDGGQRTFILCTIDQALSNNTIAKKAGYNTIDEISRERITRVAAKIR CCCCEEEEEEEECCCCCCEEEEEEEECHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHC ANNPTTNSDLGFKHYRFATPTQQTLDDLDSFDIATGHFINTSGQLAAFTESGFTDMINPF CCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCEECCCCCEEEEECCCCHHHCCCC SARGLGVPGGASGEETLLTTWLVADGYKMDIDVQTVDFSGYCARYVDNTRLYLIDERWGT CCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEEECCCCHHHHEECCCEEEEEECCCCC EQTRDLLNHIGTHQLPVQTIVIYGYSFDLESIRELEIGLKQLDQKVNLVKRY HHHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8387444; 11677609 [H]