Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is yciF [H]
Identifier: 194735089
GI number: 194735089
Start: 1803209
End: 1803712
Strand: Direct
Name: yciF [H]
Synonym: SeSA_A1861
Alternate gene names: 194735089
Gene position: 1803209-1803712 (Clockwise)
Preceding gene: 194735791
Following gene: 194733919
Centisome position: 38.29
GC content: 42.26
Gene sequence:
>504_bases ATGAATATTAAAACCGTTGAAGACCTTTTTATCCATCTACTTTCAGATACCTATAGTGCAGAAAAACAATTAACCAAGGC TCTTTCTAAACTAGCCAGAGCCACGTCCAATGAAAAATTAAGCCAGGCCTTTCAATCTCATCTTGAAGAAACCCAGGGTC AGATTGAACGTATTGATCAGATCGTCGAATCTGAATCTGGCATTAAACTGAAAAGAATGAAATGCGTCGCTATGGAAGGG CTGATTGAAGAAGCCAATGAAGTCATCGAAAGTACGGAGAAAAACGAAGTACGCGATGCAGCGCTTATCGCCGCGGCGCA AAAAGTCGAGCATTACGAAATCGCCAGCTACGGCACGCTTGCCACCCTGGCCGAGCAGCTTGGCTATAGCAAAGCATTAA AACTGCTCAAAGAAACCCTCGACGAGGAAAAACAAACTGATTTAAAACTTACCGATTTAGCAGTCAGCAATGTTAATAAA AGTGCTGAACGCAAATCGAAATAA
Upstream 100 bases:
>100_bases ATAATTCCTGATTTACTGTAATGTAAATATAACACATGCTTTTATCAAGCAATCTGCGAGTCTTCTGGCTCGCAGTATTT TGCCCAGGAGAATTAGATTT
Downstream 100 bases:
>100_bases TATTTTTAATTATCAGCTTGCATGATTCCGATTTTATTATCGGAGCAGATTATCACGCATTGAGGAATGTAAAATGAATT ATACTGAACATTATCATGAC
Product: protein YciF
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MNIKTVEDLFIHLLSDTYSAEKQLTKALSKLARATSNEKLSQAFQSHLEETQGQIERIDQIVESESGIKLKRMKCVAMEG LIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYSKALKLLKETLDEEKQTDLKLTDLAVSNVNK SAERKSK
Sequences:
>Translated_167_residues MNIKTVEDLFIHLLSDTYSAEKQLTKALSKLARATSNEKLSQAFQSHLEETQGQIERIDQIVESESGIKLKRMKCVAMEG LIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYSKALKLLKETLDEEKQTDLKLTDLAVSNVNK SAERKSK >Mature_167_residues MNIKTVEDLFIHLLSDTYSAEKQLTKALSKLARATSNEKLSQAFQSHLEETQGQIERIDQIVESESGIKLKRMKCVAMEG LIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYSKALKLLKETLDEEKQTDLKLTDLAVSNVNK SAERKSK
Specific function: Unknown
COG id: COG3685
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787512, Length=166, Percent_Identity=86.7469879518072, Blast_Score=294, Evalue=2e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010287 - InterPro: IPR012347 - InterPro: IPR009078 [H]
Pfam domain/function: PF05974 DUF892 [H]
EC number: NA
Molecular weight: Translated: 18642; Mature: 18642
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKTVEDLFIHLLSDTYSAEKQLTKALSKLARATSNEKLSQAFQSHLEETQGQIERIDQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH IVESESGIKLKRMKCVAMEGLIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTL HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLAEQLGYSKALKLLKETLDEEKQTDLKLTDLAVSNVNKSAERKSK HHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCC >Mature Secondary Structure MNIKTVEDLFIHLLSDTYSAEKQLTKALSKLARATSNEKLSQAFQSHLEETQGQIERIDQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH IVESESGIKLKRMKCVAMEGLIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTL HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLAEQLGYSKALKLLKETLDEEKQTDLKLTDLAVSNVNKSAERKSK HHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3058546; 9097039; 9278503; 8455549 [H]