Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is 194734931
Identifier: 194734931
GI number: 194734931
Start: 3237692
End: 3239116
Strand: Reverse
Name: 194734931
Synonym: SeSA_A3354
Alternate gene names: NA
Gene position: 3239116-3237692 (Counterclockwise)
Preceding gene: 194734425
Following gene: 194737952
Centisome position: 68.78
GC content: 51.93
Gene sequence:
>1425_bases ATGGATTATATTAATCGATGGCTTGGCTCTGAACTGCTGATGTTTTGTATTCTACCGTGGGGGTATGCCGCTGCGGTGGC ATTACTGCTGATCCTGATGTTTTCCAAAAAACGCAGCCGACAGATTTTGCTGTGGGTATTACTACCACAGTGGGCAGTCG TGGTATTGCTGTTACTCACGTTGCAGTACACCCAGTTGTTGAGCCAAACAGGCACGGTATGGATGTTGATGCTCCTGTTG CCGATTCTGAGTTGGGCGGGCTTGCTGCCCGCGCTGCTGCTGGGAACCTGGCTGCGCAAGCCGTGGCCCGCATGGCTGCT GTGCCATATTGTGTTCATTGGGGTGCTGTGCCCGGTGATGCCGGAGCTGTGGCGTGCTATTAGCCATCAATGGCAACAGC AAAATATTGCGCAGTTGCTCAGGCAGGTTCAGGCAGGCGACTTGGACCAGTTAGAGAGCATTCATGATAACAGTATGTTG GAACAGACACTGGTTCAGGCGGTAAAAGCGCCAGGCATATCAGAAAAAAACTTGCGCGCTCTGACTGCACGTGTGGCATC GCCTTTTAGTGTTTCGCGGGAAGATGGCTATTTCGTCAATGCGCCATTTTTTGCAGCTTTTGAGAGTGGCAATATCACTG CGGTGCGTATTTTTAGCGAGCAGCTCACGGGCGACTCTCAGCAGGCGCAGGCAAATCGCACCATCGTACGGCAGCAAAAT CCGTTGGAATATCTCCCCACGCCCCATTTTAAGCCTGAGGGATTTCGCCAGACTTTTTTTGAGATGGCCGACGTTCTACT ACGGGTCATGCCCGATCTCCTCACCGATGAAGCCTATTCGGGGGCGATACAGCTTCAGGATAAAGAGACTCTGGCCTTTT TCTGGCAGCGGCGTGAAGCGCAAAATCCGCTGTATCGCGCATATTATTTCTTGTTGCAGGGGCAAACTAAAGCGCTGCTT GCCCAGATAAAACTGACGCCGCAGGTGCTGGGACAATCACTTTATCCGAATAAAAATCTGCTGGCGTCGCTGTTTAGTGA TGCGGATGGCGAGACGCTGCGTGCGTTGGTGAAAGGGCAGATGCTGAACTGGCAGCACATCCCTCAGGATAAGTTGACGG ACGGCTGGAATTTCCTGATTTCACGCACATTGCATACAGCCTCGAAAGAGGACGCGCTGCCGCCGGATATTCTGGCGGGG ATACTGCAAAGTATGCAACAGCAACATACGGCGTTGCCGGAAGCCCTTATTGTAGCCAGCCTTGATTACCAGGATGAAAT ACATAGCCTGATGACTGCCTACCGGATGGCTTGGTTGGACTGTAACAAGCTTAACGCAATGATCGATAAGGTGTATCCAC CAGAAGATACGCGGCGTACCAATGCGCGTATAAAATTAGCACAGCAGTGCGCCGATTTAGACTGA
Upstream 100 bases:
>100_bases GTTGAATGCTTCAGTGGCGGGGGGCGAACAAGCACGAAACGATACGCGGCAACGGCTGAATGCGCTATGTCCAGTCGCGA AGTGACTAAAGGAATAGTAA
Downstream 100 bases:
>100_bases TATGCCGTGCTCTGATAATTGAAATTACATTGATTGTTAATAGAAATACAGGGAGTGGTAAATAATGAAAAAATGTTTTT TATTTATATTTGTGTGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MDYINRWLGSELLMFCILPWGYAAAVALLLILMFSKKRSRQILLWVLLPQWAVVVLLLLTLQYTQLLSQTGTVWMLMLLL PILSWAGLLPALLLGTWLRKPWPAWLLCHIVFIGVLCPVMPELWRAISHQWQQQNIAQLLRQVQAGDLDQLESIHDNSML EQTLVQAVKAPGISEKNLRALTARVASPFSVSREDGYFVNAPFFAAFESGNITAVRIFSEQLTGDSQQAQANRTIVRQQN PLEYLPTPHFKPEGFRQTFFEMADVLLRVMPDLLTDEAYSGAIQLQDKETLAFFWQRREAQNPLYRAYYFLLQGQTKALL AQIKLTPQVLGQSLYPNKNLLASLFSDADGETLRALVKGQMLNWQHIPQDKLTDGWNFLISRTLHTASKEDALPPDILAG ILQSMQQQHTALPEALIVASLDYQDEIHSLMTAYRMAWLDCNKLNAMIDKVYPPEDTRRTNARIKLAQQCADLD
Sequences:
>Translated_474_residues MDYINRWLGSELLMFCILPWGYAAAVALLLILMFSKKRSRQILLWVLLPQWAVVVLLLLTLQYTQLLSQTGTVWMLMLLL PILSWAGLLPALLLGTWLRKPWPAWLLCHIVFIGVLCPVMPELWRAISHQWQQQNIAQLLRQVQAGDLDQLESIHDNSML EQTLVQAVKAPGISEKNLRALTARVASPFSVSREDGYFVNAPFFAAFESGNITAVRIFSEQLTGDSQQAQANRTIVRQQN PLEYLPTPHFKPEGFRQTFFEMADVLLRVMPDLLTDEAYSGAIQLQDKETLAFFWQRREAQNPLYRAYYFLLQGQTKALL AQIKLTPQVLGQSLYPNKNLLASLFSDADGETLRALVKGQMLNWQHIPQDKLTDGWNFLISRTLHTASKEDALPPDILAG ILQSMQQQHTALPEALIVASLDYQDEIHSLMTAYRMAWLDCNKLNAMIDKVYPPEDTRRTNARIKLAQQCADLD >Mature_474_residues MDYINRWLGSELLMFCILPWGYAAAVALLLILMFSKKRSRQILLWVLLPQWAVVVLLLLTLQYTQLLSQTGTVWMLMLLL PILSWAGLLPALLLGTWLRKPWPAWLLCHIVFIGVLCPVMPELWRAISHQWQQQNIAQLLRQVQAGDLDQLESIHDNSML EQTLVQAVKAPGISEKNLRALTARVASPFSVSREDGYFVNAPFFAAFESGNITAVRIFSEQLTGDSQQAQANRTIVRQQN PLEYLPTPHFKPEGFRQTFFEMADVLLRVMPDLLTDEAYSGAIQLQDKETLAFFWQRREAQNPLYRAYYFLLQGQTKALL AQIKLTPQVLGQSLYPNKNLLASLFSDADGETLRALVKGQMLNWQHIPQDKLTDGWNFLISRTLHTASKEDALPPDILAG ILQSMQQQHTALPEALIVASLDYQDEIHSLMTAYRMAWLDCNKLNAMIDKVYPPEDTRRTNARIKLAQQCADLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54017; Mature: 54017
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYINRWLGSELLMFCILPWGYAAAVALLLILMFSKKRSRQILLWVLLPQWAVVVLLLLT CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHH LQYTQLLSQTGTVWMLMLLLPILSWAGLLPALLLGTWLRKPWPAWLLCHIVFIGVLCPVM HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH PELWRAISHQWQQQNIAQLLRQVQAGDLDQLESIHDNSMLEQTLVQAVKAPGISEKNLRA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LTARVASPFSVSREDGYFVNAPFFAAFESGNITAVRIFSEQLTGDSQQAQANRTIVRQQN HHHHHCCCCCCCCCCCEEECCCCEEEECCCCEEEEEEEHHHHCCCHHHHHHHHHHHHCCC PLEYLPTPHFKPEGFRQTFFEMADVLLRVMPDLLTDEAYSGAIQLQDKETLAFFWQRREA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHH QNPLYRAYYFLLQGQTKALLAQIKLTPQVLGQSLYPNKNLLASLFSDADGETLRALVKGQ CCHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHC MLNWQHIPQDKLTDGWNFLISRTLHTASKEDALPPDILAGILQSMQQQHTALPEALIVAS CCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCC LDYQDEIHSLMTAYRMAWLDCNKLNAMIDKVYPPEDTRRTNARIKLAQQCADLD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MDYINRWLGSELLMFCILPWGYAAAVALLLILMFSKKRSRQILLWVLLPQWAVVVLLLLT CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHH LQYTQLLSQTGTVWMLMLLLPILSWAGLLPALLLGTWLRKPWPAWLLCHIVFIGVLCPVM HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH PELWRAISHQWQQQNIAQLLRQVQAGDLDQLESIHDNSMLEQTLVQAVKAPGISEKNLRA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LTARVASPFSVSREDGYFVNAPFFAAFESGNITAVRIFSEQLTGDSQQAQANRTIVRQQN HHHHHCCCCCCCCCCCEEECCCCEEEECCCCEEEEEEEHHHHCCCHHHHHHHHHHHHCCC PLEYLPTPHFKPEGFRQTFFEMADVLLRVMPDLLTDEAYSGAIQLQDKETLAFFWQRREA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHH QNPLYRAYYFLLQGQTKALLAQIKLTPQVLGQSLYPNKNLLASLFSDADGETLRALVKGQ CCHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHC MLNWQHIPQDKLTDGWNFLISRTLHTASKEDALPPDILAGILQSMQQQHTALPEALIVAS CCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCC LDYQDEIHSLMTAYRMAWLDCNKLNAMIDKVYPPEDTRRTNARIKLAQQCADLD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA