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The map label for this gene is 194734685

Identifier: 194734685

GI number: 194734685

Start: 1445855

End: 1447054

Strand: Direct

Name: 194734685

Synonym: SeSA_A1492

Alternate gene names: NA

Gene position: 1445855-1447054 (Clockwise)

Preceding gene: 194734057

Following gene: 194737063

Centisome position: 30.7

GC content: 43.33

Gene sequence:

>1200_bases
ATGGTTAATCCAAAGAGCTCATGGAAAATACGTTTTTTAGGTCACGTTTTACAAGGCCGGGAAGTATGGCTGAATGAAGG
TAACCTGTCACTGGGGGAGAAAGGATGCGATATTTGTATTCCGCTTACTATAAATGAAAAAATTATTCTGAGAGAACAGG
CAGATAGTTTATTTGTTGATGCCGGGAAAGCCAGAGTTAAAGTTAACGGCCGCAGATTTAATCCAAATAAGCCGCTACCA
TCCAGTGGGGTTTTGCAGGTTGCGGGAGTGGCTATCGCGTTTGGTAAACAGGATTGTGAACTTGCTGATTATCAAATACC
CGTTTCCAGATCAGGGTACTGGTGGTTGGCTGGCGTATTCTTGATTTTCATCGGTGGAATGGGGGTCCTGTTAAGTATTG
GCGGTCAGCCTGAAACGGTAAATGACTTACCTTTGCGGGTTAAGTTTTTATTAGACAAAAGCAATATTCATTATGTGCGG
GCGCAATGGAAAGAAGATGGCAGCCTGCAGTTGTCCGGTTATTGCTCGTCAAGCGAACAGATGCAAAAGGTGAGAGCGAC
TCTCGAATCATGGGGGGTCATGTATCGGGATGGTGTAATCTGTGATGACTTATTGGTACGAGAAGTGCAGGATGTTTTGA
TAAAAATGGGTTACCCGCATGCTGAAGTATCCAGCGAAGGGCCGGGAAGCGTGTTAATTCATGATGATATACAAATGGAT
CAGCAATGGCGTAAGGTTCAACCATTACTTGCAGATATTCCCGGGTTATTGCACTGGCAGATTAGTCATTCTCATCAGTC
TCAGGGGGATGATATTATTTCTGCGATAATAGAGAACGGTTTAGTGGGGCTTGTCAATGTTACGCCAATGCGGCGCTCTT
TTGTTATCAGTGGTGTACTGGATGAATCTCATCAACGCATTTTGCAAGAAACGTTAGCAGCATTAAAGAAAAAGGACCCC
GCTCTTTCTTTAATTTATCAGGATATTGCGCCTTCTCATGATGAAAGCAAGTATCTGCCTGCGCCAGTGGCTGGCTTTGT
ACAGAGTCGCCATGGTAATTACTTATTACTGACGAATAAAGAGCGTTTACGTGTAGGGGCATTATTACCCAATGGGGGAG
AAATTGTCCATCTGAGTGCCGATGTGGTAACGATTAAACATTATGATACTTTGATTAACTATCCATTAGATTTTAAGTGA

Upstream 100 bases:

>100_bases
CCTGTCGTAGGTCATTTGTTTCGCAATGATACGACTCAAGTACATAGTGTAATCAGGCTTTTTTTGATTAAAGCCTCAGT
AGTAAATAATGGCATATCTC

Downstream 100 bases:

>100_bases
GTGGAAAATGACAACTCTGACCCGGTTAGAAGATTTGCTGCTTCATTCGCGTGAAGAGGCCAAAGGCATAATTTTACAAT
TAAGGGCTGCCCGGAAACAG

Product: type III secretion apparatus protein, YscD/HrpQ family protein

Products: NA

Alternate protein names: Type III Secretion Apparatus Protein; YscD/HrpQ Family Type III Secretion Apparatus Protein; Type III Secretion Apparatus; Type III Secretion Apparatus Protein YscD/HrpQ Family; Pathogenicity Island Protein

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADSLFVDAGKARVKVNGRRFNPNKPLP
SSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVFLIFIGGMGVLLSIGGQPETVNDLPLRVKFLLDKSNIHYVR
AQWKEDGSLQLSGYCSSSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVLDESHQRILQETLAALKKKDP
ALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK

Sequences:

>Translated_399_residues
MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADSLFVDAGKARVKVNGRRFNPNKPLP
SSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVFLIFIGGMGVLLSIGGQPETVNDLPLRVKFLLDKSNIHYVR
AQWKEDGSLQLSGYCSSSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVLDESHQRILQETLAALKKKDP
ALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK
>Mature_399_residues
MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADSLFVDAGKARVKVNGRRFNPNKPLP
SSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVFLIFIGGMGVLLSIGGQPETVNDLPLRVKFLLDKSNIHYVR
AQWKEDGSLQLSGYCSSSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVLDESHQRILQETLAALKKKDP
ALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44344; Mature: 44344

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADSLFVD
CCCCCCCCEEEEEHHHHCCCEEEEECCCCCCCCCCCCEEEEEEECCEEEEEECCCCEEEE
AGKARVKVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF
CCCEEEEECCEEECCCCCCCCCCCEEEEEEEEEECCCCCCEECEEECCCCCCCHHHHHHH
LIFIGGMGVLLSIGGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ
HHHHCCCEEEEECCCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEECCCHHH
MQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
HHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHH
QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL
HHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCHHHEEEEHHH
DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECC
ERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK
CCEEEEEECCCCCCEEEEECCEEEEEEEHHHCCCCCCCC
>Mature Secondary Structure
MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADSLFVD
CCCCCCCCEEEEEHHHHCCCEEEEECCCCCCCCCCCCEEEEEEECCEEEEEECCCCEEEE
AGKARVKVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF
CCCEEEEECCEEECCCCCCCCCCCEEEEEEEEEECCCCCCEECEEECCCCCCCHHHHHHH
LIFIGGMGVLLSIGGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ
HHHHCCCEEEEECCCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEECCCHHH
MQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
HHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHH
QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL
HHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCHHHEEEEHHH
DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECC
ERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK
CCEEEEEECCCCCCEEEEECCEEEEEEEHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA