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The map label for this gene is ygbL [H]

Identifier: 194734554

GI number: 194734554

Start: 2964150

End: 2964788

Strand: Reverse

Name: ygbL [H]

Synonym: SeSA_A3066

Alternate gene names: 194734554

Gene position: 2964788-2964150 (Counterclockwise)

Preceding gene: 194734714

Following gene: 194734881

Centisome position: 62.96

GC content: 56.18

Gene sequence:

>639_bases
ATGACGACACTGGCAAAAGAAGAGCACGCTTTGCGAGAAGAGATGGTCAGGATAGCCGCCTCGTTTTTCCAGCGCGGCTA
TGCCACCGGCTCGGCAGGCAACCTCTCGCTGTTACTGCCGGACGGCAATATTCTGGCGACGCCCACCGGTTCGTGTCTGG
GTAATCTCGACCCGCAGCGGCTATCCAAAGTGGACCCGCAGGGCGAATGGCTCAGCGGCGATAAACCGTCTAAAGAGGTG
CGTTTTCATCTGGCGTTGTATCGCAATAACCCTTGCTGCAAGGCCGTGGTACATCTGCACAGCACCTGGTCAACGGCGCT
TTCCTGTCTCGAAGGGCTGGACCCGCAAAATGTGATTCGCCCGTTTACCCCCTATGTGGTGATGCGGATGGGAGACATTC
CGCTGGTTCCCTACTATCGCCCGGGGGATGACCGAATTGCTCGCGATTTGGCTGCGCTGGCGGCCCGGCATCAGGCCTTT
TTACTGGCTAATCATGGGCCGGTCGTGTGCGGGGAGAATTTGCAGGAAGCCGCTAATAATACCGAGGAGCTGGAAGAGAC
GGCAAAGCTGATTTTTATCCTTGGCGAACGCCCGATTCGTTATTTAACCACCGAAGAAATTGCGCAGTTAAGGAGATAA

Upstream 100 bases:

>100_bases
CGTGGGTCAATGCGCTCCATGCGCCGGTCTCGCTGGCGCTAAAGTCAGGCAATTTTGGCGATGAATCCTTTTTTATCCGC
GCTCAAAGGGAGTTTCAGGT

Downstream 100 bases:

>100_bases
CCCGATGCCGCGTTTTGCCGCCAATTTGTCGATGATGTTTACCGAAGTGCCGTTTACCGAGCGTTTTGCCGCCGCTGCCG
AAGCCGGTTTTCAGGCCGTT

Product: putative aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTTLAKEEHALREEMVRIAASFFQRGYATGSAGNLSLLLPDGNILATPTGSCLGNLDPQRLSKVDPQGEWLSGDKPSKEV
RFHLALYRNNPCCKAVVHLHSTWSTALSCLEGLDPQNVIRPFTPYVVMRMGDIPLVPYYRPGDDRIARDLAALAARHQAF
LLANHGPVVCGENLQEAANNTEELEETAKLIFILGERPIRYLTTEEIAQLRR

Sequences:

>Translated_212_residues
MTTLAKEEHALREEMVRIAASFFQRGYATGSAGNLSLLLPDGNILATPTGSCLGNLDPQRLSKVDPQGEWLSGDKPSKEV
RFHLALYRNNPCCKAVVHLHSTWSTALSCLEGLDPQNVIRPFTPYVVMRMGDIPLVPYYRPGDDRIARDLAALAARHQAF
LLANHGPVVCGENLQEAANNTEELEETAKLIFILGERPIRYLTTEEIAQLRR
>Mature_211_residues
TTLAKEEHALREEMVRIAASFFQRGYATGSAGNLSLLLPDGNILATPTGSCLGNLDPQRLSKVDPQGEWLSGDKPSKEVR
FHLALYRNNPCCKAVVHLHSTWSTALSCLEGLDPQNVIRPFTPYVVMRMGDIPLVPYYRPGDDRIARDLAALAARHQAFL
LANHGPVVCGENLQEAANNTEELEETAKLIFILGERPIRYLTTEEIAQLRR

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=211, Percent_Identity=85.781990521327, Blast_Score=378, Evalue=1e-106,
Organism=Escherichia coli, GI1789164, Length=206, Percent_Identity=32.0388349514563, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 23536; Mature: 23405

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLAKEEHALREEMVRIAASFFQRGYATGSAGNLSLLLPDGNILATPTGSCLGNLDPQR
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEECCCCHHHCCCCHHH
LSKVDPQGEWLSGDKPSKEVRFHLALYRNNPCCKAVVHLHSTWSTALSCLEGLDPQNVIR
HHCCCCCCCCCCCCCCCHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
PFTPYVVMRMGDIPLVPYYRPGDDRIARDLAALAARHQAFLLANHGPVVCGENLQEAANN
CCCCEEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHEEEEECCCCEEECCCHHHHHCC
TEELEETAKLIFILGERPIRYLTTEEIAQLRR
HHHHHHHHHEEEEECCCCCEEECHHHHHHHCC
>Mature Secondary Structure 
TTLAKEEHALREEMVRIAASFFQRGYATGSAGNLSLLLPDGNILATPTGSCLGNLDPQR
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEECCCCHHHCCCCHHH
LSKVDPQGEWLSGDKPSKEVRFHLALYRNNPCCKAVVHLHSTWSTALSCLEGLDPQNVIR
HHCCCCCCCCCCCCCCCHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
PFTPYVVMRMGDIPLVPYYRPGDDRIARDLAALAARHQAFLLANHGPVVCGENLQEAANN
CCCCEEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHEEEEECCCCEEECCCHHHHHCC
TEELEETAKLIFILGERPIRYLTTEEIAQLRR
HHHHHHHHHEEEEECCCCCEEECHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240; 9278503 [H]