| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yqiG [H]
Identifier: 194734483
GI number: 194734483
Start: 3092733
End: 3095222
Strand: Reverse
Name: yqiG [H]
Synonym: SeSA_A3198
Alternate gene names: 194734483
Gene position: 3095222-3092733 (Counterclockwise)
Preceding gene: 194734167
Following gene: 194735172
Centisome position: 65.73
GC content: 61.04
Gene sequence:
>2490_bases ATGAAAATTACCCGGCTTGCCATTCTGATTACCCTGACATTTTCCGTCCTGAAGTCGCAGGCCACGGAGTTCAATGCCAG CCTGCTGGACAGCGGGAACCTGTCTAAGGTGGACCTCACGGCCTTCAGCCGCGAGGGGTATGTGGCGCCCGGTAACTATA TTCTCGATATCTGGCTCAATGACCAGCCGGTACGGGAACAGTATCCGGTCAGAGTTGTACCGGTTGCCGGACGCGACGCG GCCGTCATCTGTGTGACAACAGACATGGTGGCCATGCTGGGTCTTAAGGATAAGATTATTCATGGCCTGAAACCCGTTAC CGGTATCCCGGACGGGCAATGCCTTGAGCTGCGCTCCGCTGACAGTCAGGTACGGTACAGCGCTGAAAATCAGCGTCTGA CCTTCATTATTCCCCAGGCCTGGATGCGATATCAGGACCCGGACTGGGTCCCCCCTTCACGCTGGAGCGACGGCGTCACC GCCGGCCTGCTCGATTACAACCTGATGGTCAACCGCTATATGCCGCAGCAGGGGGAAACCTCTACCAGCTACAGCCTCTA CGGCACCGCCGGGTTTAATCTCGGCGCCTGGCGGTTGCGGAGCGATTACCAGTACAGCCGTTTTGACAGTGGGCAGGGCG CATCACAGTCCGATTTTTATCTGCCGCAGACGTATCTGTTCCGTGCCCTGCCAGCACTGCGCTCAAAACTGACGCTCGGA CAGACGTACCTCAGCTCCGCTATTTTTGACTCCTTCCGCTTTGCCGGGCTCACTTTGGCCAGCGATGAGCGCATGCTGCC ACCCTCTCTTCAGGGGTATGCCCCGAAAATCAGCGGCATTGCGAACAGTAATGCACAGGTTACCGTCAGCCAGAATGGTC GCATTCTGTACCAGACCCGGGTGTCGCCGGGGCCTTTTGAGCTTCCCGACCTGAGCCAGAATATCAGCGGCAACCTGGAT GTCAGCGTCCGGGAAAGCGACGGTAGCGTCCGGACCTGGCAGGTCAACACGGCCAGCGTCCCCTTTATGGCACGCCAGGG ACAGGTTCGCTATAAGGTGGCCGCCGGACGTCCGCTGTACGGCGGGACGCATAACAACAGCACGGTCAGCCCTGACTTTC TGCTCGGGGAGGCCACCTGGGGAGCATTTAACAACACGTCGCTGTATGGCGGCCTCATTGCCTCCACCGGCGACTACCAG TCCGCGGCGCTCGGGATCGGCCAGAATATGGGGCTGCTGGGCGCTCTGTCTGCGGACGTCACCCGCTCAGATGCGCGGTT GCCGCATGGGCAGAAGCAGTCCGGTTACAGCTACCGTATCAACTATGCCAAAACGTTTGATAAAACCGGCAGTACCCTGG CGTTCGTCGGATACCGCTTCTCGGACCGCCATTTTCTGTCCATGCCGGAGTACCTGCAGCGTCGGGCCACCGACGGCGGC GATGCATGGCATGAAAAACAGAGCTACACCGTGACTTATAGCCAGTCCGTTCCGGTACTCAATATGAGCGCTGCCCTCTC GGTAAGCCGGCTCAATTACTGGAATGCGCAGTCCAACAATAACTACATGCTCAGCTTCAACAAAGTGTTCAGTCTCGGCG ACCTTCAGGGGCTCTCGGCCTCGGTGTCGTTTGCCCGTAACCAGTACACCGGCGGGGGGAGCCAGAACCAGGTCTACGCC ACCATCAGTATCCCGTGGGGCGACAGCCGCCAGGTGAGTTACAGCGTACAGAAAGATAACCGGGGCGGCCTGCAGCAGAC CGTGAATTACAGCGATTTCCATAACCCGGACACCACATGGAACATCAGCGCCGGTCATAACCGCTATGACACCGGCAGTA ACAGCAGCTTCAGCGGCAGCGTGCAGAGCCGTCTGCCGTGGGGCCAGGCGGCAGCGGACGCCACCCTGCAGCCCGGGCAG TACCGCAGCCTGGGCCTGAGCTGGTACGGCTCGGTGACCGCCACCGCCCACGGCGCCGCCTTCAGCCAGTCGATGGCCGG GAATGAGCCTCGCATGATGATAGATACCGGAGACGTGGCCGGTGTACCGGTGAACGGCAACAGCGGGGTGACCAACCGCT TCGGGGTGGGCGTGGTGAGCGCCGGCAGCAGCTATCGGCGCAGCGATATTTCGGTTGATGTGGCCGCCCTGCCGGAGGAC GTGGACGTCAGCAGCTCCGTCATCAGCCAGGTGCTGACGGAGGGCGCGGTGGGCTACCGGAAGATTGACGCCAGCCAGGG GGAGCAGGTGCTCGGTCATATCCGGCTGGCTGATGGCGCCAGTCCACCGTTTGGCGCTCTGGTAGTGTCCGGGAAAAGCG GCAGAACCGCGGGGATGGTCGGAGATGACGGTCTGGCCTACCTGACAGGCCTCAGCGGGGAAGACCGCCGGACCCTGAAC GTGTCCTGGGATGGCCGGGTGCAGTGCAGACTCACCCTGCCGGAAACGGTGACACTCAGTCGGGGGCCGCTGTTACTGCC CTGCAGATAA
Upstream 100 bases:
>100_bases ACAGGGAGAAGCCGTCCACGGAGGGGTTCGGACGGCTTTTATATCTGACCATGCCTGCGGGCTGTCTGTTACACGGACGA CAACACGAAAGCGCCATGCC
Downstream 100 bases:
>100_bases AAATATCCCTGTCACAGAGCAGGACTAACGGAGAAAACAGGTGAAAAACAGCAGAAGAAGCCGTGTGATTTTACTCGCGC TGGCGGCAGCATGGAGCCAG
Product: fimbrial usher protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 829; Mature: 829
Protein sequence:
>829_residues MKITRLAILITLTFSVLKSQATEFNASLLDSGNLSKVDLTAFSREGYVAPGNYILDIWLNDQPVREQYPVRVVPVAGRDA AVICVTTDMVAMLGLKDKIIHGLKPVTGIPDGQCLELRSADSQVRYSAENQRLTFIIPQAWMRYQDPDWVPPSRWSDGVT AGLLDYNLMVNRYMPQQGETSTSYSLYGTAGFNLGAWRLRSDYQYSRFDSGQGASQSDFYLPQTYLFRALPALRSKLTLG QTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQNISGNLD VSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNSTVSPDFLLGEATWGAFNNTSLYGGLIASTGDYQ SAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRATDGG DAWHEKQSYTVTYSQSVPVLNMSAALSVSRLNYWNAQSNNNYMLSFNKVFSLGDLQGLSASVSFARNQYTGGGSQNQVYA TISIPWGDSRQVSYSVQKDNRGGLQQTVNYSDFHNPDTTWNISAGHNRYDTGSNSSFSGSVQSRLPWGQAAADATLQPGQ YRSLGLSWYGSVTATAHGAAFSQSMAGNEPRMMIDTGDVAGVPVNGNSGVTNRFGVGVVSAGSSYRRSDISVDVAALPED VDVSSSVISQVLTEGAVGYRKIDASQGEQVLGHIRLADGASPPFGALVVSGKSGRTAGMVGDDGLAYLTGLSGEDRRTLN VSWDGRVQCRLTLPETVTLSRGPLLLPCR
Sequences:
>Translated_829_residues MKITRLAILITLTFSVLKSQATEFNASLLDSGNLSKVDLTAFSREGYVAPGNYILDIWLNDQPVREQYPVRVVPVAGRDA AVICVTTDMVAMLGLKDKIIHGLKPVTGIPDGQCLELRSADSQVRYSAENQRLTFIIPQAWMRYQDPDWVPPSRWSDGVT AGLLDYNLMVNRYMPQQGETSTSYSLYGTAGFNLGAWRLRSDYQYSRFDSGQGASQSDFYLPQTYLFRALPALRSKLTLG QTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQNISGNLD VSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNSTVSPDFLLGEATWGAFNNTSLYGGLIASTGDYQ SAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRATDGG DAWHEKQSYTVTYSQSVPVLNMSAALSVSRLNYWNAQSNNNYMLSFNKVFSLGDLQGLSASVSFARNQYTGGGSQNQVYA TISIPWGDSRQVSYSVQKDNRGGLQQTVNYSDFHNPDTTWNISAGHNRYDTGSNSSFSGSVQSRLPWGQAAADATLQPGQ YRSLGLSWYGSVTATAHGAAFSQSMAGNEPRMMIDTGDVAGVPVNGNSGVTNRFGVGVVSAGSSYRRSDISVDVAALPED VDVSSSVISQVLTEGAVGYRKIDASQGEQVLGHIRLADGASPPFGALVVSGKSGRTAGMVGDDGLAYLTGLSGEDRRTLN VSWDGRVQCRLTLPETVTLSRGPLLLPCR >Mature_829_residues MKITRLAILITLTFSVLKSQATEFNASLLDSGNLSKVDLTAFSREGYVAPGNYILDIWLNDQPVREQYPVRVVPVAGRDA AVICVTTDMVAMLGLKDKIIHGLKPVTGIPDGQCLELRSADSQVRYSAENQRLTFIIPQAWMRYQDPDWVPPSRWSDGVT AGLLDYNLMVNRYMPQQGETSTSYSLYGTAGFNLGAWRLRSDYQYSRFDSGQGASQSDFYLPQTYLFRALPALRSKLTLG QTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQNISGNLD VSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNSTVSPDFLLGEATWGAFNNTSLYGGLIASTGDYQ SAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRATDGG DAWHEKQSYTVTYSQSVPVLNMSAALSVSRLNYWNAQSNNNYMLSFNKVFSLGDLQGLSASVSFARNQYTGGGSQNQVYA TISIPWGDSRQVSYSVQKDNRGGLQQTVNYSDFHNPDTTWNISAGHNRYDTGSNSSFSGSVQSRLPWGQAAADATLQPGQ YRSLGLSWYGSVTATAHGAAFSQSMAGNEPRMMIDTGDVAGVPVNGNSGVTNRFGVGVVSAGSSYRRSDISVDVAALPED VDVSSSVISQVLTEGAVGYRKIDASQGEQVLGHIRLADGASPPFGALVVSGKSGRTAGMVGDDGLAYLTGLSGEDRRTLN VSWDGRVQCRLTLPETVTLSRGPLLLPCR
Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fimbrial export usher family [H]
Homologues:
Organism=Escherichia coli, GI87081778, Length=832, Percent_Identity=40.3846153846154, Blast_Score=586, Evalue=1e-168, Organism=Escherichia coli, GI1786332, Length=844, Percent_Identity=29.739336492891, Blast_Score=324, Evalue=2e-89, Organism=Escherichia coli, GI1787172, Length=844, Percent_Identity=29.9763033175355, Blast_Score=298, Evalue=1e-81, Organism=Escherichia coli, GI1789533, Length=797, Percent_Identity=30.7402760351317, Blast_Score=288, Evalue=7e-79, Organism=Escherichia coli, GI1790772, Length=816, Percent_Identity=29.1666666666667, Blast_Score=279, Evalue=5e-76, Organism=Escherichia coli, GI1786744, Length=851, Percent_Identity=29.0246768507638, Blast_Score=275, Evalue=9e-75, Organism=Escherichia coli, GI1788427, Length=812, Percent_Identity=28.9408866995074, Blast_Score=243, Evalue=3e-65, Organism=Escherichia coli, GI1789610, Length=856, Percent_Identity=23.481308411215, Blast_Score=121, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000015 - InterPro: IPR018030 [H]
Pfam domain/function: PF00577 Usher [H]
EC number: NA
Molecular weight: Translated: 89863; Mature: 89863
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS01151 FIMBRIAL_USHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITRLAILITLTFSVLKSQATEFNASLLDSGNLSKVDLTAFSREGYVAPGNYILDIWLN CCHHHEEEEEHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEECCCCEECCCCEEEEEEEC DQPVREQYPVRVVPVAGRDAAVICVTTDMVAMLGLKDKIIHGLKPVTGIPDGQCLELRSA CCCCHHCCCEEEEEECCCCEEEEEEEHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEECCC DSQVRYSAENQRLTFIIPQAWMRYQDPDWVPPSRWSDGVTAGLLDYNLMVNRYMPQQGET CCEEEEECCCCEEEEEECHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCC STSYSLYGTAGFNLGAWRLRSDYQYSRFDSGQGASQSDFYLPQTYLFRALPALRSKLTLG CCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTR HHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEE VSPGPFELPDLSQNISGNLDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLY CCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEECCCCEEEEEECCCCCC GGTHNNSTVSPDFLLGEATWGAFNNTSLYGGLIASTGDYQSAALGIGQNMGLLGALSADV CCCCCCCCCCCCEEEECCCCCCCCCCEEECEEEECCCCCCHHEECCCCCCCEEEECCCCC TRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRATDGG CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCEEECCHHHHHHHCCCCC DAWHEKQSYTVTYSQSVPVLNMSAALSVSRLNYWNAQSNNNYMLSFNKVFSLGDLQGLSA CHHCCCCCEEEEEECCCCEEEEHHHEEEEEEEEECCCCCCCEEEEEHHEEECCCCCCCCC SVSFARNQYTGGGSQNQVYATISIPWGDSRQVSYSVQKDNRGGLQQTVNYSDFHNPDTTW EEEEHHCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCCCEE NISAGHNRYDTGSNSSFSGSVQSRLPWGQAAADATLQPGQYRSLGLSWYGSVTATAHGAA EECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEECEEEECCEEEEECCCH FSQSMAGNEPRMMIDTGDVAGVPVNGNSGVTNRFGVGVVSAGSSYRRSDISVDVAALPED HHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCC VDVSSSVISQVLTEGAVGYRKIDASQGEQVLGHIRLADGASPPFGALVVSGKSGRTAGMV CCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCEE GDDGLAYLTGLSGEDRRTLNVSWDGRVQCRLTLPETVTLSRGPLLLPCR CCCCEEEEECCCCCCCEEEEEEECCEEEEEEECCCEEEECCCCEEECCC >Mature Secondary Structure MKITRLAILITLTFSVLKSQATEFNASLLDSGNLSKVDLTAFSREGYVAPGNYILDIWLN CCHHHEEEEEHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEECCCCEECCCCEEEEEEEC DQPVREQYPVRVVPVAGRDAAVICVTTDMVAMLGLKDKIIHGLKPVTGIPDGQCLELRSA CCCCHHCCCEEEEEECCCCEEEEEEEHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEECCC DSQVRYSAENQRLTFIIPQAWMRYQDPDWVPPSRWSDGVTAGLLDYNLMVNRYMPQQGET CCEEEEECCCCEEEEEECHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCC STSYSLYGTAGFNLGAWRLRSDYQYSRFDSGQGASQSDFYLPQTYLFRALPALRSKLTLG CCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTR HHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEE VSPGPFELPDLSQNISGNLDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLY CCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEECCCCEEEEEECCCCCC GGTHNNSTVSPDFLLGEATWGAFNNTSLYGGLIASTGDYQSAALGIGQNMGLLGALSADV CCCCCCCCCCCCEEEECCCCCCCCCCEEECEEEECCCCCCHHEECCCCCCCEEEECCCCC TRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRATDGG CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCEEECCHHHHHHHCCCCC DAWHEKQSYTVTYSQSVPVLNMSAALSVSRLNYWNAQSNNNYMLSFNKVFSLGDLQGLSA CHHCCCCCEEEEEECCCCEEEEHHHEEEEEEEEECCCCCCCEEEEEHHEEECCCCCCCCC SVSFARNQYTGGGSQNQVYATISIPWGDSRQVSYSVQKDNRGGLQQTVNYSDFHNPDTTW EEEEHHCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCCCEE NISAGHNRYDTGSNSSFSGSVQSRLPWGQAAADATLQPGQYRSLGLSWYGSVTATAHGAA EECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEECEEEECCEEEEECCCH FSQSMAGNEPRMMIDTGDVAGVPVNGNSGVTNRFGVGVVSAGSSYRRSDISVDVAALPED HHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCC VDVSSSVISQVLTEGAVGYRKIDASQGEQVLGHIRLADGASPPFGALVVSGKSGRTAGMV CCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCEE GDDGLAYLTGLSGEDRRTLNVSWDGRVQCRLTLPETVTLSRGPLLLPCR CCCCEEEEECCCCCCCEEEEEEECCEEEEEEECCCEEEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]