| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yohF [H]
Identifier: 194734285
GI number: 194734285
Start: 2288468
End: 2289250
Strand: Reverse
Name: yohF [H]
Synonym: SeSA_A2409
Alternate gene names: 194734285
Gene position: 2289250-2288468 (Counterclockwise)
Preceding gene: 194738021
Following gene: 194735564
Centisome position: 48.61
GC content: 54.28
Gene sequence:
>783_bases ATGAATCATCCGGAGAGGAATATGACCAAAGTTGCAATTGTAACGGCATCAGATTCGGGAATTGGCAAAGCGTGTGCGTT GTTATTAGCACAAAACGGTTTTGATATTGGTATCACCTGGCATTCCGATGAACGCGGCGCGCAGGAGACGGCGAAAAAAG CGGCGCAATTTGGTGTGCGGGTAGAGACCATTCATCTTGACCTGAGCCAGTTACCCGAGGGCGCGCAGGCCATTGAACAT CTTATCCAGCGCCTGGGGCGCGTTGACGTGCTGGTCAATAATGCCGGGGCGATGACCAAATCCGCGTTTATTGATATGCC GTTTACGCAGTGGCGGCAAATTTTTACCGTGGACGTCGATGGCGCATTTCTCTGCGCGCAGATCGCCGCCCGGCATATGA TTAAACAAGGAGAGGGAGGGCGTATTATCAACATCACCTCCGTCCATGAGCATACGCCGCTTCCGCAAGCCAGCGCCTAT ACCGCGGCGAAACATGCGCTGGGGGGATTGACTAAATCCATGGCGCTGGAACTGATTGAACATCATATTTTGGTCAACGC CGTCGCGCCAGGCGCTATCGCCACGCCGATGAATGATATGGATGACAGCGACATTGAGCCGGGATCGGAACCCTCGATCC CTATCGCCCGACCGGGTTCTACGCATGAAATAGCCAGCCTCGTCGCCTGGCTGTGTTCGGAAGGCGCAAGCTATACCACC GGTCAGTCGCTGATTGTCGACGGCGGGTTTATGCTGGCGAATCCGCAATTCAACGCAAAATAA
Upstream 100 bases:
>100_bases GGCTGGATGCCTCCATTCAGCTTACCAGCGCGCTGGGCGGCGGTTATCATTCCTGATTTTTCCGGATGATTCAGACAGGG TTCCTATACTTAGGCTGTGT
Downstream 100 bases:
>100_bases ACGCCGGGGCCGGATGGCGGCGTTATGCCATCCGGATACCATCGGGTTTAACGGGCCTCCGCTTTGCCGCGGCTTTTCAG CCACCAGCGCACGCCCACCA
Product: acetoin dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MNHPERNMTKVAIVTASDSGIGKACALLLAQNGFDIGITWHSDERGAQETAKKAAQFGVRVETIHLDLSQLPEGAQAIEH LIQRLGRVDVLVNNAGAMTKSAFIDMPFTQWRQIFTVDVDGAFLCAQIAARHMIKQGEGGRIINITSVHEHTPLPQASAY TAAKHALGGLTKSMALELIEHHILVNAVAPGAIATPMNDMDDSDIEPGSEPSIPIARPGSTHEIASLVAWLCSEGASYTT GQSLIVDGGFMLANPQFNAK
Sequences:
>Translated_260_residues MNHPERNMTKVAIVTASDSGIGKACALLLAQNGFDIGITWHSDERGAQETAKKAAQFGVRVETIHLDLSQLPEGAQAIEH LIQRLGRVDVLVNNAGAMTKSAFIDMPFTQWRQIFTVDVDGAFLCAQIAARHMIKQGEGGRIINITSVHEHTPLPQASAY TAAKHALGGLTKSMALELIEHHILVNAVAPGAIATPMNDMDDSDIEPGSEPSIPIARPGSTHEIASLVAWLCSEGASYTT GQSLIVDGGFMLANPQFNAK >Mature_260_residues MNHPERNMTKVAIVTASDSGIGKACALLLAQNGFDIGITWHSDERGAQETAKKAAQFGVRVETIHLDLSQLPEGAQAIEH LIQRLGRVDVLVNNAGAMTKSAFIDMPFTQWRQIFTVDVDGAFLCAQIAARHMIKQGEGGRIINITSVHEHTPLPQASAY TAAKHALGGLTKSMALELIEHHILVNAVAPGAIATPMNDMDDSDIEPGSEPSIPIARPGSTHEIASLVAWLCSEGASYTT GQSLIVDGGFMLANPQFNAK
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=243, Percent_Identity=32.0987654320988, Blast_Score=114, Evalue=7e-26, Organism=Homo sapiens, GI15277342, Length=255, Percent_Identity=30.1960784313725, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI40254992, Length=245, Percent_Identity=31.8367346938775, Blast_Score=101, Evalue=6e-22, Organism=Homo sapiens, GI126723750, Length=248, Percent_Identity=30.6451612903226, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI7705925, Length=192, Percent_Identity=32.2916666666667, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=31.3492063492063, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI10190704, Length=260, Percent_Identity=27.6923076923077, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI5031737, Length=243, Percent_Identity=29.6296296296296, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI4504505, Length=246, Percent_Identity=28.0487804878049, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI31542939, Length=193, Percent_Identity=30.0518134715026, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI66933014, Length=250, Percent_Identity=29.6, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI7706318, Length=198, Percent_Identity=26.2626262626263, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI59889578, Length=197, Percent_Identity=29.4416243654822, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4503301, Length=210, Percent_Identity=27.1428571428571, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI33667109, Length=193, Percent_Identity=30.0518134715026, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI224922801, Length=169, Percent_Identity=30.1775147928994, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI40807363, Length=231, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI109715829, Length=199, Percent_Identity=29.1457286432161, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI20149619, Length=193, Percent_Identity=25.3886010362694, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI142976729, Length=220, Percent_Identity=25, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI210032110, Length=178, Percent_Identity=24.1573033707865, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1788459, Length=251, Percent_Identity=79.6812749003984, Blast_Score=425, Evalue=1e-120, Organism=Escherichia coli, GI1789208, Length=245, Percent_Identity=33.0612244897959, Blast_Score=133, Evalue=9e-33, Organism=Escherichia coli, GI87082160, Length=245, Percent_Identity=34.2857142857143, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1790717, Length=246, Percent_Identity=31.7073170731707, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1787335, Length=243, Percent_Identity=34.156378600823, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=32.7935222672065, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1787905, Length=244, Percent_Identity=34.4262295081967, Blast_Score=110, Evalue=9e-26, Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=30.5555555555556, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1786812, Length=254, Percent_Identity=32.2834645669291, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1789057, Length=259, Percent_Identity=28.957528957529, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI2367365, Length=249, Percent_Identity=26.9076305220884, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1789378, Length=248, Percent_Identity=29.4354838709677, Blast_Score=89, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71994604, Length=256, Percent_Identity=30.078125, Blast_Score=127, Evalue=8e-30, Organism=Caenorhabditis elegans, GI71994600, Length=255, Percent_Identity=29.8039215686275, Blast_Score=119, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=31.2977099236641, Blast_Score=117, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17562906, Length=268, Percent_Identity=32.4626865671642, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17562910, Length=269, Percent_Identity=33.0855018587361, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI193204405, Length=263, Percent_Identity=33.4600760456274, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17562990, Length=259, Percent_Identity=31.2741312741313, Blast_Score=110, Evalue=6e-25, Organism=Caenorhabditis elegans, GI17555706, Length=243, Percent_Identity=33.3333333333333, Blast_Score=109, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17562908, Length=268, Percent_Identity=30.2238805970149, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17561402, Length=249, Percent_Identity=30.1204819277108, Blast_Score=106, Evalue=9e-24, Organism=Caenorhabditis elegans, GI17551412, Length=273, Percent_Identity=31.5018315018315, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17563726, Length=265, Percent_Identity=30.188679245283, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17531453, Length=266, Percent_Identity=30.4511278195489, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI115534694, Length=243, Percent_Identity=32.5102880658436, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17560220, Length=261, Percent_Identity=33.3333333333333, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17562904, Length=268, Percent_Identity=30.2238805970149, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=31.7164179104478, Blast_Score=101, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17560676, Length=248, Percent_Identity=29.8387096774194, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI25147288, Length=244, Percent_Identity=30.7377049180328, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI72000259, Length=262, Percent_Identity=31.2977099236641, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17538480, Length=266, Percent_Identity=30.0751879699248, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17559104, Length=265, Percent_Identity=29.0566037735849, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17538486, Length=274, Percent_Identity=29.1970802919708, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17565030, Length=276, Percent_Identity=29.3478260869565, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17568967, Length=188, Percent_Identity=30.8510638297872, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17564282, Length=191, Percent_Identity=27.7486910994764, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193203117, Length=192, Percent_Identity=27.0833333333333, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193203115, Length=192, Percent_Identity=27.0833333333333, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17536651, Length=247, Percent_Identity=26.7206477732794, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17561272, Length=248, Percent_Identity=26.6129032258064, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17536025, Length=246, Percent_Identity=25.2032520325203, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17544670, Length=265, Percent_Identity=24.9056603773585, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17538182, Length=256, Percent_Identity=27.34375, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI71997099, Length=207, Percent_Identity=27.536231884058, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17555612, Length=224, Percent_Identity=27.6785714285714, Blast_Score=67, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=253, Percent_Identity=24.901185770751, Blast_Score=85, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6323882, Length=247, Percent_Identity=28.7449392712551, Blast_Score=79, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6322861, Length=190, Percent_Identity=30.5263157894737, Blast_Score=70, Evalue=4e-13, Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=30.8943089430894, Blast_Score=114, Evalue=8e-26, Organism=Drosophila melanogaster, GI21355319, Length=249, Percent_Identity=29.718875502008, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI28571526, Length=246, Percent_Identity=31.7073170731707, Blast_Score=111, Evalue=4e-25, Organism=Drosophila melanogaster, GI21357041, Length=246, Percent_Identity=29.6747967479675, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI24639444, Length=244, Percent_Identity=29.9180327868852, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24644339, Length=246, Percent_Identity=27.6422764227642, Blast_Score=101, Evalue=6e-22, Organism=Drosophila melanogaster, GI18859837, Length=237, Percent_Identity=31.2236286919831, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24643142, Length=244, Percent_Identity=29.9180327868852, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI28571387, Length=202, Percent_Identity=31.1881188118812, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI24580925, Length=193, Percent_Identity=31.0880829015544, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24641232, Length=201, Percent_Identity=28.8557213930348, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24644337, Length=221, Percent_Identity=28.5067873303167, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24584748, Length=196, Percent_Identity=29.5918367346939, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI161076933, Length=196, Percent_Identity=29.5918367346939, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24584744, Length=202, Percent_Identity=28.7128712871287, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI28574402, Length=202, Percent_Identity=28.7128712871287, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI116007236, Length=206, Percent_Identity=26.6990291262136, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI17737361, Length=256, Percent_Identity=26.171875, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI21358495, Length=196, Percent_Identity=25.5102040816327, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24663911, Length=202, Percent_Identity=27.7227722772277, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24584752, Length=199, Percent_Identity=26.1306532663317, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI116007234, Length=224, Percent_Identity=26.7857142857143, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 27738; Mature: 27738
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHPERNMTKVAIVTASDSGIGKACALLLAQNGFDIGITWHSDERGAQETAKKAAQFGVR CCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCE VETIHLDLSQLPEGAQAIEHLIQRLGRVDVLVNNAGAMTKSAFIDMPFTQWRQIFTVDVD EEEEEEEHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHEECCCHHHCCEEEEEECC GAFLCAQIAARHMIKQGEGGRIINITSVHEHTPLPQASAYTAAKHALGGLTKSMALELIE CHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HHILVNAVAPGAIATPMNDMDDSDIEPGSEPSIPIARPGSTHEIASLVAWLCSEGASYTT HHHHEEECCCCCEECCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCC GQSLIVDGGFMLANPQFNAK CCEEEEECCEEEECCCCCCC >Mature Secondary Structure MNHPERNMTKVAIVTASDSGIGKACALLLAQNGFDIGITWHSDERGAQETAKKAAQFGVR CCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCE VETIHLDLSQLPEGAQAIEHLIQRLGRVDVLVNNAGAMTKSAFIDMPFTQWRQIFTVDVD EEEEEEEHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHEECCCHHHCCEEEEEECC GAFLCAQIAARHMIKQGEGGRIINITSVHEHTPLPQASAYTAAKHALGGLTKSMALELIE CHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HHILVNAVAPGAIATPMNDMDDSDIEPGSEPSIPIARPGSTHEIASLVAWLCSEGASYTT HHHHEEECCCCCEECCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCC GQSLIVDGGFMLANPQFNAK CCEEEEECCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]